cbx1a cDNA ORF clone, Danio rerio(zebrafish)
| Gene Symbol | cbx1a |
| Entrez Gene ID | 326746 |
| Full Name | chromobox homolog 1a (HP1 beta homolog Drosophila) |
| Synonyms | cbx1,wu:fe14b09,zgc:55739 |
| General protein information |
|
| Gene Type | protein-coding |
| Organism | Danio rerio(zebrafish) |
mRNA and Protein(s)
| mRNA | Protein | Name |
|---|---|---|
| NM_199746.2 | NP_956040.2 | chromobox protein homolog 1 |
| LOC697437 | XP_001088037.1 | |
| Homo sapiens (human) | CBX1 | NP_006798.1 |
| Canis lupus familiaris (dog) | CBX1 | XP_548171.1 |
| Bos taurus (cattle) | CBX1 | NP_001193344.1 |
| Mus musculus (house mouse) | Cbx1 | NP_031648.1 |
| Danio rerio (zebrafish) | cbx1b | NP_001002090.1 |
| Pan troglodytes (chimpanzee) | CBX1 | NP_001239487.1 |
| Gallus gallus (chicken) | CBX1 | NP_989663.1 |
| Danio rerio (zebrafish) | cbx1a | NP_956040.1 |
| Bos taurus (cattle) | LOC101904753 | XP_005210243.1 |
| Rattus norvegicus (Norway rat) | Cbx1 | XP_006247297.1 |
| Drosophila melanogaster (fruit fly) | HP1b | NP_001162713.1 |
| Anopheles gambiae (African malaria mosquito) | AgaP_AGAP004723 | XP_318105.4 |
| Xenopus tropicalis (tropical clawed frog) | cbx1 | NP_001017150.1 |
Related articles in PubMed
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Zimmerman MW, Liu Y, He S, Durbin AD, Abraham BJ, Easton J, Shao Y, Xu B, Zhu S, Zhang X, Li Z, Weichert-Leahey N, Young RA, Zhang J, Look AT
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Proteomic analysis of three gonad types of swamp eel reveals genes differentially expressed during sex reversal.
Sheng Y, Zhao W, Song Y, Li Z, Luo M, Lei Q, Cheng H, Zhou R
Scientific reports510176(2015 May)
RNA-seq of the aging brain in the short-lived fish N.?furzeri - conserved pathways and novel genes associated with neurogenesis.
Baumgart M, Groth M, Priebe S, Savino A, Testa G, Dix A, Ripa R, Spallotta F, Gaetano C, Ori M, Terzibasi Tozzini E, Guthke R, Platzer M, Cellerino A
Aging cell13(6)965-74(2014 Dec)
Repertoire of protein kinases encoded in the genome of zebrafish shows remarkably large population of PIM kinases.
Rakshambikai R, Srinivasan N, Gadkari RA
Journal of bioinformatics and computational biology12(1)1350014(2014 Feb)
Molecular and cellular characterization of a zebrafish optic pathway tumor line implicates glia-derived progenitors in tumorigenesis.
Solin SL, Wang Y, Mauldin J, Schultz LE, Lincow DE, Brodskiy PA, Jones CA, Syrkin-Nikolau J, Linn JM, Essner JJ, Hostetter JM, Whitley EM, Cameron JD, Chou HH, Severin AJ, Sakaguchi DS, McGrail M
PloS one9(12)e114888(2014)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following cbx1a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the cbx1a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | ODa98459 | |
| Clone ID Related Accession (Same CDS sequence) | NM_199746.2 | |
| Accession Version | NM_199746.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 639bp) Protein sequence SNP |
|
| Vector | pcDNA3.1+/C-(K)DYK or customized vector |  User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-12-07 | |
| Organism | Danio rerio(zebrafish) | |
| Product | chromobox protein homolog 1 | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CR450718.10, EH545424.1 and EH457628.1. On Nov 5, 2015 this sequence version replaced NM_199746.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: BC045443.1, BC075782.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. | |
1 | ATGAGCATGA GCCAACCTAC AGAGACAGTT AGTGATGCTC CCAGCGTCAC CGAAGAAGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_956040.2 |
| CDS | 264..902 |
| Translation |
Target ORF information:
Target ORF information:
|
 NM_199746.2 |
ORF Insert Sequence:
1 | ATGAGCATGA GCCAACCTAC AGAGACAGTT AGTGATGCTC CCAGCGTCAC CGAAGAAGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
c-MYC drives a subset of high-risk pediatric neuroblastomas and is activated through mechanisms including enhancer hijacking and focal enhancer amplification. |
|
Proteomic analysis of three gonad types of swamp eel reveals genes differentially expressed during sex reversal. |
|
RNA-seq of the aging brain in the short-lived fish N.?furzeri - conserved pathways and novel genes associated with neurogenesis. |
|
Repertoire of protein kinases encoded in the genome of zebrafish shows remarkably large population of PIM kinases. |
|
Molecular and cellular characterization of a zebrafish optic pathway tumor line implicates glia-derived progenitors in tumorigenesis. |