Gene Symbol | WDR48B |
Entrez Gene ID | 334682 |
Full Name | WD repeat domain 48b |
Synonyms | fk50c12,wd48,wdr48,wu:fd19a04,wu:fk50c12,zgc:66229 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(Zebrafish) |
ORF » Species Summary » Danio rerio » WDR48B cDNA ORF clone
gRNAs
Gene Symbol | WDR48B |
Entrez Gene ID | 334682 |
Full Name | WD repeat domain 48b |
Synonyms | fk50c12,wd48,wdr48,wu:fd19a04,wu:fk50c12,zgc:66229 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(Zebrafish) |
mRNA | Protein | Name |
---|---|---|
NM_214709.1 | NP_999874.1 | WD repeat-containing protein 48 |
XM_005168422.4 | XP_005168479.1 | WD repeat-containing protein 48 isoform X1 |
XM_005168422.3 | XP_005168479.1 | WD repeat-containing protein 48 isoform X1 |
XM_005168423.4 | XP_005168480.1 | WD repeat-containing protein 48 isoform X2 |
XM_005168423.3 | XP_005168480.1 | WD repeat-containing protein 48 isoform X2 |
Homo sapiens (human) | WDR48 | NP_065890.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP001361 | XP_321784.3 |
Bos taurus (cattle) | WDR48 | NP_001069992.1 |
Mus musculus (house mouse) | Wdr48 | NP_080512.1 |
Drosophila melanogaster (fruit fly) | CG9062 | NP_001260886.1 |
WDR48 | XP_001083670.2 | |
Gallus gallus (chicken) | WDR48 | NP_001026135.1 |
Caenorhabditis elegans (roundworm) | F35G12.4 | NP_497930.2 |
Xenopus tropicalis (tropical clawed frog) | wdr48 | NP_001072858.1 |
Pan troglodytes (chimpanzee) | WDR48 | XP_516374.3 |
Canis lupus familiaris (dog) | WDR48 | XP_860103.1 |
Rattus norvegicus (Norway rat) | Wdr48 | NP_001129367.1 |
Danio rerio (zebrafish) | wdr48 | NP_999874.1 |
Arabidopsis thaliana (thale cress) | LRS1 | NP_850516.1 |
Oryza sativa (rice) | Os12g0165000 | NP_001066238.1 |
Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
The zebrafish gene map defines ancestral vertebrate chromosomes.
Woods IG, Wilson C, Friedlander B, Chang P, Reyes DK, Nix R, Kelly PD, Chu F, Postlethwait JH, Talbot WS
Genome research15(9)1307-14(2005 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following WDR48B gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the WDR48B cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa37750 | |
Clone ID Related Accession (Same CDS sequence) | NM_214709.1 | |
Accession Version | NM_214709.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2034bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-01-26 | |
Organism | Danio rerio(zebrafish) | |
Product | WD repeat-containing protein 48 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC057489.1. ##Evidence-Data-START## Transcript exon combination :: BC057489.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCGACGC TTCACAGACA GAACGCCGCT GGACGGAGAA AGGTCCAGGT TTCCTATGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_999874.1 |
CDS | 14..2047 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCGACGC TTCACAGACA GAACGCCGCT GGACGGAGAA AGGTCCAGGT TTCCTATGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa07501 | |
Clone ID Related Accession (Same CDS sequence) | XM_005168422.4 , XM_005168422.3 | |
Accession Version | XM_005168422.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2031bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | WD repeat-containing protein 48 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007113.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005168422.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGACGC TTCACAGACA GAACGCCGCT GGACGGAGAA AGGTCCAGGT TTCCTATGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005168479.1 |
CDS | 34..2064 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCGACGC TTCACAGACA GAACGCCGCT GGACGGAGAA AGGTCCAGGT TTCCTATGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa07501 | |
Clone ID Related Accession (Same CDS sequence) | XM_005168422.4 , XM_005168422.3 | |
Accession Version | XM_005168422.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2031bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | WD repeat-containing protein 48 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007113.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005168422.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGACGC TTCACAGACA GAACGCCGCT GGACGGAGAA AGGTCCAGGT TTCCTATGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005168479.1 |
CDS | 12..2042 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCGACGC TTCACAGACA GAACGCCGCT GGACGGAGAA AGGTCCAGGT TTCCTATGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa07502 | |
Clone ID Related Accession (Same CDS sequence) | XM_005168423.4 , XM_005168423.3 | |
Accession Version | XM_005168423.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2028bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | WD repeat-containing protein 48 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007113.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005168423.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGACGC TTCACAGACA GAACGCCGCT GGACGGAGAA AGGTTTCCTA TGTGATTAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005168480.1 |
CDS | 21..2048 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCGACGC TTCACAGACA GAACGCCGCT GGACGGAGAA AGGTTTCCTA TGTGATTAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa07502 | |
Clone ID Related Accession (Same CDS sequence) | XM_005168423.4 , XM_005168423.3 | |
Accession Version | XM_005168423.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2028bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | WD repeat-containing protein 48 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007113.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005168423.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGACGC TTCACAGACA GAACGCCGCT GGACGGAGAA AGGTTTCCTA TGTGATTAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005168480.1 |
CDS | 9..2036 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCGACGC TTCACAGACA GAACGCCGCT GGACGGAGAA AGGTTTCCTA TGTGATTAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Evolution of complexity in the zebrafish synapse proteome. |
RFX transcription factors are essential for hearing in mice. |
The zebrafish gene map defines ancestral vertebrate chromosomes. |