Gene Symbol | BANF1 |
Entrez Gene ID | 334717 |
Full Name | barrier to autointegration factor 1 |
Synonyms | baf,fa01c01,wu:fa01c01,zgc:77767 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(Zebrafish) |
ORF » Species Summary » Danio rerio » BANF1 cDNA ORF clone
gRNAs
Gene Symbol | BANF1 |
Entrez Gene ID | 334717 |
Full Name | barrier to autointegration factor 1 |
Synonyms | baf,fa01c01,wu:fa01c01,zgc:77767 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(Zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_017352752.1 | XP_017208241.1 | barrier-to-autointegration factor isoform X1 |
NM_205562.1 | NP_991125.1 | barrier-to-autointegration factor |
XM_017352751.1 | XP_017208240.1 | barrier-to-autointegration factor isoform X1 |
Danio rerio (zebrafish) | banf1 | NP_991125.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP008753 | XP_314872.1 |
Rattus norvegicus (Norway rat) | Banf1 | NP_446083.1 |
Drosophila melanogaster (fruit fly) | baf | NP_609176.1 |
Pan troglodytes (chimpanzee) | BANF1 | XP_003339255.1 |
Canis lupus familiaris (dog) | BANF1 | XP_854776.1 |
Xenopus tropicalis (tropical clawed frog) | banf1 | XP_002940546.1 |
Homo sapiens (human) | BANF1 | NP_003851.1 |
Mus musculus (house mouse) | Banf1 | NP_001033320.1 |
Caenorhabditis elegans (roundworm) | baf-1 | NP_499085.1 |
BANF1 | XP_001111884.2 | |
Bos taurus (cattle) | BANF1 | NP_892033.1 |
Quantitative Proteomics Analysis Reveals Novel Targets of miR-21 in Zebrafish Embryos.
Wu Y, Lou QY, Ge F, Xiong Q
Scientific reports7(1)4022(2017 Jun)
Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
A network of epigenetic regulators guides developmental haematopoiesis in vivo.
Huang HT, Kathrein KL, Barton A, Gitlin Z, Huang YH, Ward TP, Hofmann O, Dibiase A, Song A, Tyekucheva S, Hide W, Zhou Y, Zon LI
Nature cell biology15(12)1516-25(2013 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following BANF1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the BANF1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa25955 | |
Clone ID Related Accession (Same CDS sequence) | XM_017352752.1 , NM_205562.1 , XM_017352751.1 | |
Accession Version | NM_205562.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 273bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-24 | |
Organism | Danio rerio(zebrafish) | |
Product | barrier-to-autointegration factor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC065864.1. ##Evidence-Data-START## Transcript exon combination :: BC065864.1, EH455327.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505377, SAMEA4476732 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTCGTCGA CATCACAGAA ACACAAGGAC TTTGTGGCAG AGCCCATGGG CGAGAAGTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_991125.1 |
CDS | 118..390 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCGTCGA CATCACAGAA ACACAAGGAC TTTGTGGCAG AGCCCATGGG CGAGAAGTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa25955 | |
Clone ID Related Accession (Same CDS sequence) | XM_017352752.1 , NM_205562.1 , XM_017352751.1 | |
Accession Version | XM_017352752.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 273bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | barrier-to-autointegration factor isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007132.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCGTCGA CATCACAGAA ACACAAGGAC TTTGTGGCAG AGCCCATGGG CGAGAAGTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017208241.1 |
CDS | 163..435 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCGTCGA CATCACAGAA ACACAAGGAC TTTGTGGCAG AGCCCATGGG CGAGAAGTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa25955 | |
Clone ID Related Accession (Same CDS sequence) | XM_017352752.1 , NM_205562.1 , XM_017352751.1 | |
Accession Version | XM_017352751.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 273bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | barrier-to-autointegration factor isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007132.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCGTCGA CATCACAGAA ACACAAGGAC TTTGTGGCAG AGCCCATGGG CGAGAAGTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017208240.1 |
CDS | 172..444 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCGTCGA CATCACAGAA ACACAAGGAC TTTGTGGCAG AGCCCATGGG CGAGAAGTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Quantitative Proteomics Analysis Reveals Novel Targets of miR-21 in Zebrafish Embryos. |
Evolution of complexity in the zebrafish synapse proteome. |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
RFX transcription factors are essential for hearing in mice. |
A network of epigenetic regulators guides developmental haematopoiesis in vivo. |