Gene Symbol | supt6h |
Entrez Gene ID | 337866 |
Full Name | SPT6 homolog, histone chaperone |
Synonyms | Spt6,wu:fj42h11 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » supt6h cDNA ORF clone
Gene Symbol | supt6h |
Entrez Gene ID | 337866 |
Full Name | SPT6 homolog, histone chaperone |
Synonyms | Spt6,wu:fj42h11 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_009295470.2 | XP_009293745.1 | transcription elongation factor SPT6 isoform X1 |
XM_009295470.3 | XP_009293745.1 | transcription elongation factor SPT6 isoform X1 |
NM_145118.1 | NP_660094.1 | transcription elongation factor SPT6 |
SUPT6H | XP_001106850.2 | |
Canis lupus familiaris (dog) | SUPT6H | XP_537747.2 |
Caenorhabditis elegans (roundworm) | emb-5 | NP_497969.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_11491 | XP_003718184.1 |
Arabidopsis thaliana (thale cress) | AT1G63210 | NP_176510.1 |
Gallus gallus (chicken) | SUPT6H | XP_423183.3 |
Schizosaccharomyces pombe (fission yeast) | spt6 | NP_594487.2 |
Drosophila melanogaster (fruit fly) | Spt6 | NP_651962.2 |
Kluyveromyces lactis | KLLA0B11385g | XP_452036.1 |
Eremothecium gossypii | AGOS_AAR031W | NP_982572.2 |
Neurospora crassa | NCU04611 | XP_958854.1 |
Arabidopsis thaliana (thale cress) | GTB1 | NP_001077775.1 |
Xenopus tropicalis (tropical clawed frog) | supt6h | NP_001072665.1 |
Homo sapiens (human) | SUPT6H | NP_003161.2 |
Pan troglodytes (chimpanzee) | SUPT6H | XP_001143115.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP003619 | XP_313379.5 |
Saccharomyces cerevisiae (baker's yeast) | SPT6 | NP_011631.1 |
Bos taurus (cattle) | SUPT6H | NP_001180055.1 |
Mus musculus (house mouse) | Supt6 | NP_033323.2 |
Rattus norvegicus (Norway rat) | Supt6h | NP_001178749.1 |
Danio rerio (zebrafish) | supt6h | NP_660094.1 |
Multi-organ toxicity induced by fine particulate matter PM
Duan J, Hu H, Zhang Y, Feng L, Shi Y, Miller MR, Sun Z
Chemosphere18024-32(2017 Aug)
Genomic organization and evolution of olfactory receptors and trace amine-associated receptors in channel catfish, Ictalurus punctatus.
Gao S, Liu S, Yao J, Li N, Yuan Z, Zhou T, Li Q, Liu Z
Biochimica et biophysica acta1861(3)644-651(2017 03)
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
The histone chaperone Spt6 coordinates histone H3K27 demethylation and myogenesis.
Wang AH, Zare H, Mousavi K, Wang C, Moravec CE, Sirotkin HI, Ge K, Gutierrez-Cruz G, Sartorelli V
The EMBO journal32(8)1075-86(2013 Apr)
Evolution of the tbx6/16 subfamily genes in vertebrates: insights from zebrafish.
Ahn D, You KH, Kim CH
Molecular biology and evolution29(12)3959-83(2012 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Spt6 is essential for the transcriptional response to activation of the Notch pathway.
Title: The role of the SPT6 chromatin remodeling factor in zebrafish embryogenesis.
The elongation factors Pandora/Spt6 and Foggy/Spt5 promote transcription in the zebrafish embryo. (Pandora/Spt6)
Title: The elongation factors Pandora/Spt6 and Foggy/Spt5 promote transcription in the zebrafish embryo.
The following supt6h gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the supt6h cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa01282 | |
Clone ID Related Accession (Same CDS sequence) | NM_145118.1 | |
Accession Version | NM_145118.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5181bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-07 | |
Organism | Danio rerio(zebrafish) | |
Product | transcription elongation factor SPT6 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF421378.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AF421378.1, BC063248.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTCTGACT TCATCGAGAG CGAGGCTGAG GAGTCGGAGG AGGAGTTTGA GGAGAAGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_660094.1 |
CDS | 84..5264 |
Translation |
Target ORF information:
Target ORF information:
|
NM_145118.1 |
1 | ATGTCTGACT TCATCGAGAG CGAGGCTGAG GAGTCGGAGG AGGAGTTTGA GGAGAAGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa40130 | |
Clone ID Related Accession (Same CDS sequence) | XM_009295470.2 , XM_009295470.3 | |
Accession Version | XM_009295470.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5187bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | transcription elongation factor SPT6 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007132.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009295470.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCTGACT TCATCGAGAG CGAGGCTGAG GAGTCGGAGG AGGAGTTTGA GGAGAAGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009293745.1 |
CDS | 148..5334 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009295470.2 |
1 | ATGTCTGACT TCATCGAGAG CGAGGCTGAG GAGTCGGAGG AGGAGTTTGA GGAGAAGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa40130 | |
Clone ID Related Accession (Same CDS sequence) | XM_009295470.2 , XM_009295470.3 | |
Accession Version | XM_009295470.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5187bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | transcription elongation factor SPT6 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007132.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_009295470.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCTGACT TCATCGAGAG CGAGGCTGAG GAGTCGGAGG AGGAGTTTGA GGAGAAGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009293745.1 |
CDS | 152..5338 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009295470.3 |
1 | ATGTCTGACT TCATCGAGAG CGAGGCTGAG GAGTCGGAGG AGGAGTTTGA GGAGAAGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Multi-organ toxicity induced by fine particulate matter PM |
Genomic organization and evolution of olfactory receptors and trace amine-associated receptors in channel catfish, Ictalurus punctatus. |
RFX transcription factors are essential for hearing in mice. |
The histone chaperone Spt6 coordinates histone H3K27 demethylation and myogenesis. |
Evolution of the tbx6/16 subfamily genes in vertebrates: insights from zebrafish. |