Gene Symbol | sp5a |
Entrez Gene ID | 353154 |
Full Name | Sp5 transcription factor a |
Synonyms | bts1,fc39b01,sp5,wu:fc39b01 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » sp5a cDNA ORF clone
Gene Symbol | sp5a |
Entrez Gene ID | 353154 |
Full Name | Sp5 transcription factor a |
Synonyms | bts1,fc39b01,sp5,wu:fc39b01 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
NM_180973.3 | NP_851304.2 | transcription factor Sp5 |
Homo sapiens (human) | SP5 | NP_001003845.1 |
Canis lupus familiaris (dog) | SP5 | XP_851518.2 |
Pan troglodytes (chimpanzee) | SP5 | XP_001135769.2 |
Rattus norvegicus (Norway rat) | Sp5 | NP_001100022.1 |
SP5 | XP_001082704.1 | |
Danio rerio (zebrafish) | sp5a | NP_851304.1 |
Bos taurus (cattle) | SP5 | XP_005202450.1 |
Mus musculus (house mouse) | Sp5 | NP_071880.1 |
Gallus gallus (chicken) | SP5 | NP_001038149.1 |
Xenopus tropicalis (tropical clawed frog) | sp5 | NP_989092.1 |
Lef1-dependent hypothalamic neurogenesis inhibits anxiety.
Xie Y, Kaufmann D, Moulton MJ, Panahi S, Gaynes JA, Watters HN, Zhou D, Xue HH, Fung CM, Levine EM, Letsou A, Brennan KC, Dorsky RI
PLoS biology15(8)e2002257(2017 Aug)
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
Analysis of maternal-zygotic ugdh mutants reveals divergent roles for HSPGs in vertebrate embryogenesis and provides new insight into the initiation of left-right asymmetry.
Superina S, Borovina A, Ciruna B
Developmental biology387(2)154-66(2014 Mar)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
sp5 transcription factors mediate the downstream responses to Wnt/beta-catenin signaling in several developmental processes in zebrafish.
Title: The Sp1-related transcription factors sp5 and sp5-like act downstream of Wnt/beta-catenin signaling in mesoderm and neuroectoderm patterning.
The following sp5a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the sp5a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa40144 | |
Clone ID Related Accession (Same CDS sequence) | NM_180973.3 | |
Accession Version | NM_180973.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1107bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-06-29 | |
Organism | Danio rerio(zebrafish) | |
Product | transcription factor Sp5 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CR394567.8. On Jun 12, 2015 this sequence version replaced NM_180973.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AF388363.1, BC162645.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168447, SAMEA3505370 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCAGCTG TGGCTGTGCT GAGGAACGAC ACACTACAGG CGTTTCTGCA GGATCGCACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_851304.2 |
CDS | 145..1251 |
Translation |
Target ORF information:
Target ORF information:
|
NM_180973.3 |
1 | ATGGCAGCTG TGGCTGTGCT GAGGAACGAC ACACTACAGG CGTTTCTGCA GGATCGCACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Lef1-dependent hypothalamic neurogenesis inhibits anxiety. |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
RFX transcription factors are essential for hearing in mice. |
Analysis of maternal-zygotic ugdh mutants reveals divergent roles for HSPGs in vertebrate embryogenesis and provides new insight into the initiation of left-right asymmetry. |