Gene Symbol | yars |
Entrez Gene ID | 368235 |
Full Name | tyrosyl-tRNA synthetase |
Synonyms | cb204,wu:fk52b08 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » yars cDNA ORF clone
Gene Symbol | yars |
Entrez Gene ID | 368235 |
Full Name | tyrosyl-tRNA synthetase |
Synonyms | cb204,wu:fk52b08 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
NM_201316.1 | NP_958473.1 | tyrosine--tRNA ligase, cytoplasmic |
XM_005159598.3 | XP_005159655.1 | tyrosine--tRNA ligase, cytoplasmic isoform X1 |
XM_005159598.4 | XP_005159655.1 | tyrosine--tRNA ligase, cytoplasmic isoform X1 |
XM_021468004.1 | XP_021323679.1 | tyrosine--tRNA ligase, cytoplasmic isoform X1 |
Saccharomyces cerevisiae (baker's yeast) | TYS1 | NP_011701.3 |
Kluyveromyces lactis | KLLA0F15389g | XP_455771.1 |
Oryza sativa (rice) | Os04g0303900 | NP_001052413.1 |
Neurospora crassa | NCU07755 | XP_958548.2 |
Homo sapiens (human) | YARS | NP_003671.1 |
Pan troglodytes (chimpanzee) | YARS | XP_001164500.1 |
YARS | XP_001104797.2 | |
Mus musculus (house mouse) | Yars | NP_598912.4 |
Rattus norvegicus (Norway rat) | Yars | NP_001020867.2 |
Gallus gallus (chicken) | YARS | NP_001006314.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP003003 | XP_311880.3 |
Schizosaccharomyces pombe (fission yeast) | yrs1 | NP_587876.1 |
Xenopus tropicalis (tropical clawed frog) | yars | NP_001004987.1 |
Canis lupus familiaris (dog) | YARS | XP_535324.4 |
Bos taurus (cattle) | YARS | NP_776645.1 |
Danio rerio (zebrafish) | yars | NP_958473.1 |
Eremothecium gossypii | AGOS_AAL148W | NP_982394.1 |
Drosophila melanogaster (fruit fly) | Aats-tyr | NP_648895.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_02449 | XP_003709239.1 |
Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)
A single Danio rerio hars gene encodes both cytoplasmic and mitochondrial histidyl-tRNA synthetases.
Waldron AL, Cahan SH, Franklyn CS, Ebert AM
PloS one12(9)e0185317(2017)
Evolutionary and Expression Analyses Show Co-option of
Wang S, Yang Q, Wang Z, Feng S, Li H, Ji D, Zhang S
Frontiers in genetics8225(2017)
Acetylation promotes TyrRS nuclear translocation to prevent oxidative damage.
Cao X, Li C, Xiao S, Tang Y, Huang J, Zhao S, Li X, Li J, Zhang R, Yu W
Proceedings of the National Academy of Sciences of the United States of America114(4)687-692(2017 Jan)
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following yars gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the yars cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa24265 | |
Clone ID Related Accession (Same CDS sequence) | NM_201316.1 , XM_005159598.3 , XM_005159598.4 , XM_021468004.1 | |
Accession Version | NM_201316.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1590bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-07-28 | |
Organism | Danio rerio(zebrafish) | |
Product | tyrosine--tRNA ligase, cytoplasmic | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY398430.1. ##Evidence-Data-START## Transcript exon combination :: AY398430.1, BC076558.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGGAGAGC AGCTGAGTCC TGATGAGAAG TTCCAGCTCA TCACCAGAAA CCTTCAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_958473.1 |
CDS | 65..1654 |
Translation |
Target ORF information:
Target ORF information:
|
NM_201316.1 |
1 | ATGGGAGAGC AGCTGAGTCC TGATGAGAAG TTCCAGCTCA TCACCAGAAA CCTTCAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa24265 | |
Clone ID Related Accession (Same CDS sequence) | NM_201316.1 , XM_005159598.3 , XM_005159598.4 , XM_021468004.1 | |
Accession Version | XM_005159598.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1590bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | tyrosine--tRNA ligase, cytoplasmic isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005159598.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGAGC AGCTGAGTCC TGATGAGAAG TTCCAGCTCA TCACCAGAAA CCTTCAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005159655.1 |
CDS | 91..1680 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005159598.3 |
1 | ATGGGAGAGC AGCTGAGTCC TGATGAGAAG TTCCAGCTCA TCACCAGAAA CCTTCAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa24265 | |
Clone ID Related Accession (Same CDS sequence) | NM_201316.1 , XM_005159598.3 , XM_005159598.4 , XM_021468004.1 | |
Accession Version | XM_005159598.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1590bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | tyrosine--tRNA ligase, cytoplasmic isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005159598.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGAGC AGCTGAGTCC TGATGAGAAG TTCCAGCTCA TCACCAGAAA CCTTCAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005159655.1 |
CDS | 90..1679 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005159598.4 |
1 | ATGGGAGAGC AGCTGAGTCC TGATGAGAAG TTCCAGCTCA TCACCAGAAA CCTTCAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa24265 | |
Clone ID Related Accession (Same CDS sequence) | NM_201316.1 , XM_005159598.3 , XM_005159598.4 , XM_021468004.1 | |
Accession Version | XM_021468004.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1590bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | tyrosine--tRNA ligase, cytoplasmic isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGAGC AGCTGAGTCC TGATGAGAAG TTCCAGCTCA TCACCAGAAA CCTTCAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021323679.1 |
CDS | 56..1645 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021468004.1 |
1 | ATGGGAGAGC AGCTGAGTCC TGATGAGAAG TTCCAGCTCA TCACCAGAAA CCTTCAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Evolution of complexity in the zebrafish synapse proteome. |
A single Danio rerio hars gene encodes both cytoplasmic and mitochondrial histidyl-tRNA synthetases. |
Evolutionary and Expression Analyses Show Co-option of |
Acetylation promotes TyrRS nuclear translocation to prevent oxidative damage. |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |