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gbgt1l1 cDNA ORF clone, Danio rerio(zebrafish)

Summary

Gene Symbol gbgt1l1
Entrez Gene ID 393300
Full Name globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1
Synonyms zgc:56701
General protein information
Preferred Names

globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1

Names

globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1
FS-L1
Gene Type protein-coding
Organism Danio rerio(zebrafish)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_200329.1 NP_956623.1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1

Pathways from BioSystems


Homologies


Canis lupus familiaris (dog) GBGT1 NP_001003193.1
Danio rerio (zebrafish) LOC100005704 XP_005165294.1
Danio rerio (zebrafish) LOC100330771 XP_002661025.1
Homo sapiens (human) GBGT1 NP_068836.2
Danio rerio (zebrafish) gbgt1l3 NP_001004620.1
Danio rerio (zebrafish) si:ch211-287c22.1 NP_001122030.1
Danio rerio (zebrafish) gbgt1l1 NP_956623.1
Danio rerio (zebrafish) gbgt1l4 NP_956419.1
Danio rerio (zebrafish) gbgt1l2 NP_001120986.1
Danio rerio (zebrafish) abo NP_001116741.1
Pan troglodytes (chimpanzee) GBGT1 XP_520336.2
Mus musculus (house mouse) Gbgt1 NP_631936.2
Danio rerio (zebrafish) si:ch211-135f11.4 XP_001344454.2
Bos taurus (cattle) GBGT1 NP_001069977.1
Gallus gallus (chicken) GBGT1 NP_001025854.1

Gene Ontology


Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

Long-term evolution of the CAZY glycosyltransferase 6 (ABO) gene family from fishes to mammals--a birth-and-death evolution model.
Turcot-Dubois AL, Le Moullac-Vaidye B, Despiau S, Roubinet F, Bovin N, Le Pendu J, Blancher A
Glycobiology17(5)516-28(2007 May)

Hematopoietic gene expression profile in zebrafish kidney marrow.
Song HD, Sun XJ, Deng M, Zhang GW, Zhou Y, Wu XY, Sheng Y, Chen Y, Ruan Z, Jiang CL, Fan HY, Zon LI, Kanki JP, Liu TX, Look AT, Chen Z
Proceedings of the National Academy of Sciences of the United States of America101(46)16240-5(2004 Nov)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following gbgt1l1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the gbgt1l1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa33388 NM_200329.1
Latest version!		 Danio rerio globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1 (gbgt1l1), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $174.30
$249.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ODa33388
Clone ID Related Accession (Same CDS sequence) NM_200329.1
Accession Version NM_200329.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 951bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-08-05
Organism Danio rerio(zebrafish)
Product globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC052142.1. ##Evidence-Data-START## Transcript exon combination :: BC052142.1, EH540925.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
ATGCGAATCC GTCAGAGCTC AAATTTCTTT CTTCTTGGGG TGACTGCTGG CTTGCCACTG 
ACTGGGCTGA TTTTTTTTGG CTACACCACT ATATGGTTCA GAAGTCAACA AATGGACAAC 
TTTGGTCGGA CGGATGTTGT TACTTTGACA CCATGGCTGG CCCCAGTTGT TTGGACGGGA 
ACCTTTGACT CCAAAATGAT TGACTCTATC TACAAACACC AAAACATCAC TGTAGCGACC 
ACAGTCTTCG CCCTGGGAAA ATACACGCGT TTTCTCAAAG ATTTTCTGGA GTCAGCGGAG 
GAGCATTACT TTGATGGATT TCGAGTCCAT TATTACCTGT TCACGGATCA GCCTGAAGCA 
GTTCCTGAAG TAAAGATGGG TGAAAACCAT CGTTTGACAG TCAGAAAGGT CCCAAGTTTG 
GACCGATGGC AGGACATCAG TATGGGCAGG ATGGAGATAC TGGAAAAACT AATAGCGGAT 
GAACTGATGC ATGAAGCCAA CTATATATTC TGCCTCGATG TGGATACAAA GTTCTATGGC 
CGCTGGGGAT CAGAGACTTT GGGTAATCTG GTAGGTGTGA TTCACCCTTG GTTTTTTGAT 
TATCCAAGGG AATCATTTAC ATACGAGCGA AGACCGGAGT CTAAAGCATT CATTGCGGTT 
GGGGAAGGTG ATTATTATTA CACTGCTGCC GCATTTGGTG GCACATTAGA GGAAATACAT 
CGTCTCACCA AAACCTGCCG CGAGCAGCTG AACGCTGATC ATGAAAACTC CATTGAGGCA 
ATATGGCATG AGGAGTCTCA CTTGAACAAG TATTTCCTTT ACAACAAACC CACTAAGCTG 
CTGTCACCTG AGTATCTGTG GCGGGACATC AACATAAGTG CAGGACAAAT AAGAATTGTT 
CGCTTCTCTC ATGTGGCTAA AAACAATGCA GAGGTTCGTC CGAACTTGTA G

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_956623.1
CDS132..1082
Translation

Target ORF information:

RefSeq Version NM_200329.1
Organism Danio rerio(zebrafish)
Definition Danio rerio globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1 (gbgt1l1), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_200329.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
ATGCGAATCC GTCAGAGCTC AAATTTCTTT CTTCTTGGGG TGACTGCTGG CTTGCCACTG 
ACTGGGCTGA TTTTTTTTGG CTACACCACT ATATGGTTCA GAAGTCAACA AATGGACAAC 
TTTGGTCGGA CGGATGTTGT TACTTTGACA CCATGGCTGG CCCCAGTTGT TTGGACGGGA 
ACCTTTGACT CCAAAATGAT TGACTCTATC TACAAACACC AAAACATCAC TGTAGCGACC 
ACAGTCTTCG CCCTGGGAAA ATACACGCGT TTTCTCAAAG ATTTTCTGGA GTCAGCGGAG 
GAGCATTACT TTGATGGATT TCGAGTCCAT TATTACCTGT TCACGGATCA GCCTGAAGCA 
GTTCCTGAAG TAAAGATGGG TGAAAACCAT CGTTTGACAG TCAGAAAGGT CCCAAGTTTG 
GACCGATGGC AGGACATCAG TATGGGCAGG ATGGAGATAC TGGAAAAACT AATAGCGGAT 
GAACTGATGC ATGAAGCCAA CTATATATTC TGCCTCGATG TGGATACAAA GTTCTATGGC 
CGCTGGGGAT CAGAGACTTT GGGTAATCTG GTAGGTGTGA TTCACCCTTG GTTTTTTGAT 
TATCCAAGGG AATCATTTAC ATACGAGCGA AGACCGGAGT CTAAAGCATT CATTGCGGTT 
GGGGAAGGTG ATTATTATTA CACTGCTGCC GCATTTGGTG GCACATTAGA GGAAATACAT 
CGTCTCACCA AAACCTGCCG CGAGCAGCTG AACGCTGATC ATGAAAACTC CATTGAGGCA 
ATATGGCATG AGGAGTCTCA CTTGAACAAG TATTTCCTTT ACAACAAACC CACTAAGCTG 
CTGTCACCTG AGTATCTGTG GCGGGACATC AACATAAGTG CAGGACAAAT AAGAATTGTT 
CGCTTCTCTC ATGTGGCTAA AAACAATGCA GAGGTTCGTC CGAACTTGTA G

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J


book

Long-term evolution of the CAZY glycosyltransferase 6 (ABO) gene family from fishes to mammals--a birth-and-death evolution model.
Glycobiology17(5)516-28(2007 May)
Turcot-Dubois AL,Le Moullac-Vaidye B,Despiau S,Roubinet F,Bovin N,Le Pendu J,Blancher A


book

Hematopoietic gene expression profile in zebrafish kidney marrow.
Proceedings of the National Academy of Sciences of the United States of America101(46)16240-5(2004 Nov)
Song HD,Sun XJ,Deng M,Zhang GW,Zhou Y,Wu XY,Sheng Y,Chen Y,Ruan Z,Jiang CL,Fan HY,Zon LI,Kanki JP,Liu TX,Look AT,Chen Z