Gene Symbol | TRA2A |
Entrez Gene ID | 393388 |
Full Name | transformer 2 alpha homolog |
Synonyms | zgc:64175 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(Zebrafish) |
ORF » Species Summary » Danio rerio » TRA2A cDNA ORF clone
Gene Symbol | TRA2A |
Entrez Gene ID | 393388 |
Full Name | transformer 2 alpha homolog |
Synonyms | zgc:64175 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(Zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_009294204.2 | XP_009292479.1 | transformer-2 protein homolog alpha isoform X2 |
XM_009294204.3 | XP_009292479.1 | transformer-2 protein homolog alpha isoform X2 |
NM_200416.1 | NP_956710.1 | transformer-2 protein homolog alpha |
XM_005170010.3 | XP_005170067.1 | transformer-2 protein homolog alpha isoform X2 |
XM_005170007.4 | XP_005170064.1 | transformer-2 protein homolog alpha isoform X1 |
XM_005170010.4 | XP_005170067.1 | transformer-2 protein homolog alpha isoform X2 |
XM_005170007.3 | XP_005170064.1 | transformer-2 protein homolog alpha isoform X1 |
Canis lupus familiaris (dog) | TRA2A | XP_539475.3 |
Danio rerio (zebrafish) | tra2a | NP_956710.1 |
Pan troglodytes (chimpanzee) | TRA2A | XP_001158245.1 |
Mus musculus (house mouse) | Tra2a | NP_932770.2 |
Gallus gallus (chicken) | TRA2A | NP_001006360.1 |
Homo sapiens (human) | TRA2A | NP_037425.1 |
Rattus norvegicus (Norway rat) | Tra2a | NP_001119768.2 |
Xenopus tropicalis (tropical clawed frog) | tra2a | NP_001004819.1 |
TRA2A | XP_001083952.2 | |
Bos taurus (cattle) | TRA2A | NP_001039845.1 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
The zebrafish transcriptome during early development.
Vesterlund L, Jiao H, Unneberg P, Hovatta O, Kere J
BMC developmental biology1130(2011 May)
Phylogenetic and evolutionary relationships and developmental expression patterns of the zebrafish twist gene family.
Yeo GH, Cheah FS, Winkler C, Jabs EW, Venkatesh B, Chong SS
Development genes and evolution219(6)289-300(2009 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following TRA2A gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TRA2A cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa03202 | |
Clone ID Related Accession (Same CDS sequence) | NM_200416.1 | |
Accession Version | NM_200416.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 894bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-11-23 | |
Organism | Danio rerio(zebrafish) | |
Product | transformer-2 protein homolog alpha | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC054632.1. ##Evidence-Data-START## Transcript exon combination :: BC054632.1, EH541757.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAGTGATA CTGAAGAGCA ACAATTCCAG AGGAGGGAAT CTCGCTCGGC GTCCAAATCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_956710.1 |
CDS | 77..970 |
Translation |
Target ORF information:
Target ORF information:
|
NM_200416.1 |
1 | ATGAGTGATA CTGAAGAGCA ACAATTCCAG AGGAGGGAAT CTCGCTCGGC GTCCAAATCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa24116 | |
Clone ID Related Accession (Same CDS sequence) | XM_005170007.4 , XM_005170007.3 | |
Accession Version | XM_005170007.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 891bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | transformer-2 protein homolog alpha isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005170007.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGTGATA CTGAAGAGCA ACAATTCCAG AGGAGGGAAT CTCGCTCGGC GTCCAAATCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005170064.1 |
CDS | 134..1024 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005170007.4 |
1 | ATGAGTGATA CTGAAGAGCA ACAATTCCAG AGGAGGGAAT CTCGCTCGGC GTCCAAATCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa24116 | |
Clone ID Related Accession (Same CDS sequence) | XM_005170007.4 , XM_005170007.3 | |
Accession Version | XM_005170007.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 891bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | transformer-2 protein homolog alpha isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005170007.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGTGATA CTGAAGAGCA ACAATTCCAG AGGAGGGAAT CTCGCTCGGC GTCCAAATCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005170064.1 |
CDS | 134..1024 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005170007.3 |
1 | ATGAGTGATA CTGAAGAGCA ACAATTCCAG AGGAGGGAAT CTCGCTCGGC GTCCAAATCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa24118 | |
Clone ID Related Accession (Same CDS sequence) | XM_009294204.2 , XM_009294204.3 , XM_005170010.3 , XM_005170010.4 | |
Accession Version | XM_009294204.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 807bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | transformer-2 protein homolog alpha isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009294204.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGAGCA GGTCTGGTTC TCCCAGCCCT TCCAGAGCAT CCAAGCGTTC TGATTCAAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009292479.1 |
CDS | 505..1311 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009294204.2 |
1 | ATGGAGAGCA GGTCTGGTTC TCCCAGCCCT TCCAGAGCAT CCAAGCGTTC TGATTCAAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa24118 | |
Clone ID Related Accession (Same CDS sequence) | XM_009294204.2 , XM_009294204.3 , XM_005170010.3 , XM_005170010.4 | |
Accession Version | XM_009294204.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 807bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | transformer-2 protein homolog alpha isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_009294204.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGAGCA GGTCTGGTTC TCCCAGCCCT TCCAGAGCAT CCAAGCGTTC TGATTCAAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009292479.1 |
CDS | 508..1314 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009294204.3 |
1 | ATGGAGAGCA GGTCTGGTTC TCCCAGCCCT TCCAGAGCAT CCAAGCGTTC TGATTCAAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa24118 | |
Clone ID Related Accession (Same CDS sequence) | XM_009294204.2 , XM_009294204.3 , XM_005170010.3 , XM_005170010.4 | |
Accession Version | XM_005170010.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 807bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | transformer-2 protein homolog alpha isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005170010.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGAGCA GGTCTGGTTC TCCCAGCCCT TCCAGAGCAT CCAAGCGTTC TGATTCAAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005170067.1 |
CDS | 518..1324 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005170010.3 |
1 | ATGGAGAGCA GGTCTGGTTC TCCCAGCCCT TCCAGAGCAT CCAAGCGTTC TGATTCAAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa24118 | |
Clone ID Related Accession (Same CDS sequence) | XM_009294204.2 , XM_009294204.3 , XM_005170010.3 , XM_005170010.4 | |
Accession Version | XM_005170010.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 807bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | transformer-2 protein homolog alpha isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005170010.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGAGCA GGTCTGGTTC TCCCAGCCCT TCCAGAGCAT CCAAGCGTTC TGATTCAAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005170067.1 |
CDS | 521..1327 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005170010.4 |
1 | ATGGAGAGCA GGTCTGGTTC TCCCAGCCCT TCCAGAGCAT CCAAGCGTTC TGATTCAAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
RFX transcription factors are essential for hearing in mice. |
The zebrafish transcriptome during early development. |
Phylogenetic and evolutionary relationships and developmental expression patterns of the zebrafish twist gene family. |