Gene Symbol | cabp5a |
Entrez Gene ID | 393671 |
Full Name | calcium binding protein 5a |
Synonyms | zgc:73060 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » cabp5a cDNA ORF clone
Gene Symbol | cabp5a |
Entrez Gene ID | 393671 |
Full Name | calcium binding protein 5a |
Synonyms | zgc:73060 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_005156000.3 | XP_005156057.1 | calcium binding protein 5a isoform X1 |
NM_200698.2 | NP_956992.1 | calcium binding protein 5a |
Canis lupus familiaris (dog) | CABP5 | XP_541529.2 |
Bos taurus (cattle) | CABP5 | NP_777153.1 |
Rattus norvegicus (Norway rat) | Cabp5 | NP_001102377.1 |
Danio rerio (zebrafish) | cabp5a | NP_956992.1 |
Mus musculus (house mouse) | Cabp5 | NP_038905.1 |
Pan troglodytes (chimpanzee) | CABP5 | XP_001154118.2 |
LOC718484 | XP_001111235.1 | |
Danio rerio (zebrafish) | cabp5b | NP_001018568.1 |
Homo sapiens (human) | CABP5 | NP_062829.1 |
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
Characterization of the calcium binding protein family in zebrafish.
Di Donato V, Auer TO, Duroure K, Del Bene F
PloS one8(1)e53299(2013)
Expressed sequence tag analysis of zebrafish eye tissues for NEIBank.
Vihtelic TS, Fadool JM, Gao J, Thornton KA, Hyde DR, Wistow G
Molecular vision111083-100(2005 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following cabp5a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the cabp5a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa17532 | |
Clone ID Related Accession (Same CDS sequence) | XM_005156000.3 , NM_200698.2 | |
Accession Version | NM_200698.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 498bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-11-23 | |
Organism | Danio rerio(zebrafish) | |
Product | calcium binding protein 5a | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AL929495.21. On Jan 25, 2007 this sequence version replaced NM_200698.1. ##Evidence-Data-START## Transcript exon combination :: DN859342.1, DN897870.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGACTGCAT GCATATTTCT ACGCGGAGCC AAAATTGACC GAGAGCTGGC GGATGATGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_956992.1 |
CDS | 127..624 |
Translation |
Target ORF information:
Target ORF information:
|
NM_200698.2 |
1 | ATGACTGCAT GCATATTTCT ACGCGGAGCC AAAATTGACC GAGAGCTGGC GGATGATGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa17532 | |
Clone ID Related Accession (Same CDS sequence) | XM_005156000.3 , NM_200698.2 | |
Accession Version | XM_005156000.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 498bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | calcium binding protein 5a isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007123.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005156000.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACTGCAT GCATATTTCT ACGCGGAGCC AAAATTGACC GAGAGCTGGC GGATGATGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005156057.1 |
CDS | 137..634 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005156000.3 |
1 | ATGACTGCAT GCATATTTCT ACGCGGAGCC AAAATTGACC GAGAGCTGGC GGATGATGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RFX transcription factors are essential for hearing in mice. |
Characterization of the calcium binding protein family in zebrafish. |
Expressed sequence tag analysis of zebrafish eye tissues for NEIBank. |