Gene Symbol | ikzf5 |
Entrez Gene ID | 402893 |
Full Name | IKAROS family zinc finger 5 |
Synonyms | wu:fb55f09,zgc:92405 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » ikzf5 cDNA ORF clone
Gene Symbol | ikzf5 |
Entrez Gene ID | 402893 |
Full Name | IKAROS family zinc finger 5 |
Synonyms | wu:fb55f09,zgc:92405 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_017351615.1 | XP_017207104.1 | zinc finger protein Pegasus isoform X1 |
XM_009293021.2 | XP_009291296.1 | zinc finger protein Pegasus isoform X2 |
XM_009293021.3 | XP_009291296.1 | zinc finger protein Pegasus isoform X1 |
NM_205601.1 | NP_991164.1 | zinc finger protein Pegasus |
Pan troglodytes (chimpanzee) | IKZF5 | XP_003312848.1 |
Mus musculus (house mouse) | Ikzf5 | NP_780324.2 |
Canis lupus familiaris (dog) | IKZF5 | XP_005637876.1 |
Bos taurus (cattle) | IKZF5 | NP_001077182.1 |
Rattus norvegicus (Norway rat) | Ikzf5 | NP_001101025.1 |
Danio rerio (zebrafish) | ikzf5 | NP_991164.1 |
Xenopus tropicalis (tropical clawed frog) | ikzf5 | NP_001017355.1 |
Homo sapiens (human) | IKZF5 | NP_001258769.1 |
IKZF5 | XP_001108027.2 | |
Gallus gallus (chicken) | IKZF5 | NP_001026766.1 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
Pegasus, the 'atypical' Ikaros family member, influences left-right asymmetry and regulates pitx2 expression.
John LB, Trengove MC, Fraser FW, Yoong SH, Ward AC
Developmental biology377(1)46-54(2013 May)
Evolution of the Ikaros gene family: implications for the origins of adaptive immunity.
John LB, Yoong S, Ward AC
Journal of immunology (Baltimore, Md. : 1950)182(8)4792-9(2009 Apr)
Hematopoietic gene expression profile in zebrafish kidney marrow.
Song HD, Sun XJ, Deng M, Zhang GW, Zhou Y, Wu XY, Sheng Y, Chen Y, Ruan Z, Jiang CL, Fan HY, Zon LI, Kanki JP, Liu TX, Look AT, Chen Z
Proceedings of the National Academy of Sciences of the United States of America101(46)16240-5(2004 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Pitx2, implicated in left-right asymmetry, possessed appropriate 'atypical' Pegasus binding sites in its promoter.
Title: Pegasus, the 'atypical' Ikaros family member, influences left-right asymmetry and regulates pitx2 expression.
The following ikzf5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ikzf5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa37831 | |
Clone ID Related Accession (Same CDS sequence) | NM_205601.1 | |
Accession Version | NM_205601.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1260bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-22 | |
Organism | Danio rerio(zebrafish) | |
Product | zinc finger protein Pegasus | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY394931.1. ##Evidence-Data-START## Transcript exon combination :: AY394931.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGGCGAGG AGAAGCCAGA ACCACTGGAT TTCGTGAAGG ACTTTCAGGA GTACCTGAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_991164.1 |
CDS | 378..1637 |
Translation |
Target ORF information:
Target ORF information:
|
NM_205601.1 |
1 | ATGGGCGAGG AGAAGCCAGA ACCACTGGAT TTCGTGAAGG ACTTTCAGGA GTACCTGAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa40705 | |
Clone ID Related Accession (Same CDS sequence) | XM_009293021.2 , XM_009293021.3 | |
Accession Version | XM_009293021.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1260bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | zinc finger protein Pegasus isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007128.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009293021.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCGAGG AGAAGCCAGA ACCACTGGAT TTCGTGAAGG ACTTTCAGGA GTACCTGAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009291296.1 |
CDS | 406..1665 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009293021.2 |
1 | ATGGGCGAGG AGAAGCCAGA ACCACTGGAT TTCGTGAAGG ACTTTCAGGA GTACCTGAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa40705 | |
Clone ID Related Accession (Same CDS sequence) | XM_009293021.2 , XM_009293021.3 | |
Accession Version | XM_009293021.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1260bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | zinc finger protein Pegasus isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007128.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_009293021.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCGAGG AGAAGCCAGA ACCACTGGAT TTCGTGAAGG ACTTTCAGGA GTACCTGAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009291296.1 |
CDS | 401..1660 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009293021.3 |
1 | ATGGGCGAGG AGAAGCCAGA ACCACTGGAT TTCGTGAAGG ACTTTCAGGA GTACCTGAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa55569 | |
Clone ID Related Accession (Same CDS sequence) | XM_017351615.1 | |
Accession Version | XM_017351615.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1380bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | zinc finger protein Pegasus isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007128.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTGTTGT TTGATGTGGG CGTCGCTTTA CAAAGATTTT CTTTTGTATA TGCATCTGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017207104.1 |
CDS | 267..1646 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017351615.1 |
1 | ATGTTGTTGT TTGATGTGGG CGTCGCTTTA CAAAGATTTT CTTTTGTATA TGCATCTGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
Pegasus, the 'atypical' Ikaros family member, influences left-right asymmetry and regulates pitx2 expression. |
Evolution of the Ikaros gene family: implications for the origins of adaptive immunity. |
Hematopoietic gene expression profile in zebrafish kidney marrow. |