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dgcr6 cDNA ORF clone, Danio rerio(zebrafish)

Summary

Gene Symbol dgcr6
Entrez Gene ID 403055
Full Name DiGeorge syndrome critical region gene 6
Synonyms DGCR6L,zgc:101841
General protein information
Preferred Names

DiGeorge syndrome critical region gene 6

Names

protein DGCR6L
Gene Type protein-coding
Organism Danio rerio(zebrafish)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_017357308.1 XP_017212797.1 protein DGCR6L isoform X1
XM_017357308.2 XP_017212797.1 protein DGCR6L isoform X1
NM_205739.1 NP_991302.1 protein DGCR6L

Pathways from BioSystems


Homologies


Homo sapiens (human) LOC102724770 XP_006724997.1
Homo sapiens (human) DGCR6 NP_005666.2
Bos taurus (cattle) DGCR6 NP_001103916.1
Danio rerio (zebrafish) dgcr6 NP_991302.1
Xenopus tropicalis (tropical clawed frog) dgcr6 XP_002932120.1
Canis lupus familiaris (dog) DGCR6 XP_849993.1
Gallus gallus (chicken) DGCR6 NP_990371.1

Gene Ontology


Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Comparative mapping of the 22q11.2 deletion region and the potential of simple model organisms.
Guna A, Butcher NJ, Bassett AS
Journal of neurodevelopmental disorders7(1)18(2015)

Hematopoietic gene expression profile in zebrafish kidney marrow.
Song HD, Sun XJ, Deng M, Zhang GW, Zhou Y, Wu XY, Sheng Y, Chen Y, Ruan Z, Jiang CL, Fan HY, Zon LI, Kanki JP, Liu TX, Look AT, Chen Z
Proceedings of the National Academy of Sciences of the United States of America101(46)16240-5(2004 Nov)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following dgcr6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the dgcr6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa33345 NM_205739.1
Latest version!		 Danio rerio DiGeorge syndrome critical region gene 6 (dgcr6), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $104.30
$149.00
ODa59954 XM_017357308.2
Latest version!		 Danio rerio DiGeorge syndrome critical region gene 6 (dgcr6), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $104.30
$149.00
View Old Accession Versions >>
ODa59954 XM_017357308.1 Danio rerio DiGeorge syndrome critical region gene 6 (dgcr6), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $104.30
$149.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ODa33345
Clone ID Related Accession (Same CDS sequence) NM_205739.1
Accession Version NM_205739.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 594bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-11-23
Organism Danio rerio(zebrafish)
Product protein DGCR6L
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY398335.1. ##Evidence-Data-START## Transcript exon combination :: AY398335.1, BC081411.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476772, SAMEA4476798 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
ATGGATCTGT ACTGTACTGT GAGTGGTGAT CAGTCTGATT CTGCCAGACA ACAGGAGAGA 
CATTATTACC TGCTGTCAGA GCTGCAGACG CTGGTGAAGG ACCTGTCAAG CTCGTTCCAG 
CAGCGTCTGT CCTACACCAC TCTCAGTGAT CTGGCTCAGG CGCTCATCGA TGGGACGGTC 
TATGAGATCG TTCAAGGCCT TCTGGATATT CAGCATCTGA CGGAGAAAAA CCTCTACAAC 
CAGAGACAGA AACTACACAG CGAACACAGA GGCCTCAAGC AGGATTTGAT CCGGAAACAC 
AAGCAGGCCC TGCAGGCGTG CAAATCTCAC AATCTGTCGG TTCTGAAAAC TAACCAGCGA 
GCTGAAACTG AGGCTCTGGA TCAGCGGGTC AAAGACGAGC AAAGGATGAT GGACGAAAAG 
ATTGTGGCTG AAATGGACCA GAAGGTTCTG GATCAGCAGA ACACGCTGGA GAAAGCAGGC 
GTACCGGGTT TTTACATCAC CTCCAACCCA CAGGAGGTGA TGATGCAGAT GAATCTTCTG 
GAGCTTGTTC TGAAACTGCA GCAGAAGGAG ACTCTCTCTG GATCTTTGCC TTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_991302.1
CDS136..729
Translation

Target ORF information:

RefSeq Version NM_205739.1
Organism Danio rerio(zebrafish)
Definition Danio rerio DiGeorge syndrome critical region gene 6 (dgcr6), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_205739.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
ATGGATCTGT ACTGTACTGT GAGTGGTGAT CAGTCTGATT CTGCCAGACA ACAGGAGAGA 
CATTATTACC TGCTGTCAGA GCTGCAGACG CTGGTGAAGG ACCTGTCAAG CTCGTTCCAG 
CAGCGTCTGT CCTACACCAC TCTCAGTGAT CTGGCTCAGG CGCTCATCGA TGGGACGGTC 
TATGAGATCG TTCAAGGCCT TCTGGATATT CAGCATCTGA CGGAGAAAAA CCTCTACAAC 
CAGAGACAGA AACTACACAG CGAACACAGA GGCCTCAAGC AGGATTTGAT CCGGAAACAC 
AAGCAGGCCC TGCAGGCGTG CAAATCTCAC AATCTGTCGG TTCTGAAAAC TAACCAGCGA 
GCTGAAACTG AGGCTCTGGA TCAGCGGGTC AAAGACGAGC AAAGGATGAT GGACGAAAAG 
ATTGTGGCTG AAATGGACCA GAAGGTTCTG GATCAGCAGA ACACGCTGGA GAAAGCAGGC 
GTACCGGGTT TTTACATCAC CTCCAACCCA CAGGAGGTGA TGATGCAGAT GAATCTTCTG 
GAGCTTGTTC TGAAACTGCA GCAGAAGGAG ACTCTCTCTG GATCTTTGCC TTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa59954
Clone ID Related Accession (Same CDS sequence) XM_017357308.1 , XM_017357308.2
Accession Version XM_017357308.1 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 594bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-23
Organism Danio rerio(Zebrafish)
Product protein DGCR6L isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007119.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
ATGGATCTGT ACTGTACTGT GAGTGGTGAT CAGTCTGATT CTGCCAGACA ACAGGAGAGA 
CATTATTACC TGCTGTCAGA GCTGCAGACG CTGGTGAAGG ACCTGTCAAG CTCGTTCCAG 
CAGCGTCTGT CCTACACCAC TCTCAGTGAT CTGGCTCAGG CGCTCATCGA TGGGACGGTC 
TATGAGATCG TTCAAGGCCT TCTGGATATT CAGCATCTGA CGGAGAAAAA CCTCTACAAC 
CAGAGACAGA AACTACACAG CGAACACAGA GGCCTCAAGC AGGATTTGAT CCGGAAACAC 
AAGCAGGCCC TGCAGGCGTG CAAATCTCAC AATCTGTCGG TTCTGAAAAC TAACCAGCGA 
GCTGAAACTG AGGCTCTGGA TCAGCGGGTC AAAGACGAGC AAAGGATGAT GGACGAAAAG 
ATTGTGGCTG AAATGGACCA GAAGGTTCTG GATCAGCAGA ACACGCTGGA GAAAGCAGGC 
GTACCGGGTT TCTACATCAC CTCCAACCCA CAGGAGGTGA TGATGCAGAT GAATCTTCTG 
GAGCTTGTTC TGAAACTGCA GCAGAAGGAG ACTCTCTCTG GATCTTTGCC TTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_017212797.1
CDS238..831
Translation

Target ORF information:

RefSeq Version XM_017357308.1
Organism Danio rerio(Zebrafish)
Definition Danio rerio DiGeorge syndrome critical region gene 6 (dgcr6), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_017357308.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
ATGGATCTGT ACTGTACTGT GAGTGGTGAT CAGTCTGATT CTGCCAGACA ACAGGAGAGA 
CATTATTACC TGCTGTCAGA GCTGCAGACG CTGGTGAAGG ACCTGTCAAG CTCGTTCCAG 
CAGCGTCTGT CCTACACCAC TCTCAGTGAT CTGGCTCAGG CGCTCATCGA TGGGACGGTC 
TATGAGATCG TTCAAGGCCT TCTGGATATT CAGCATCTGA CGGAGAAAAA CCTCTACAAC 
CAGAGACAGA AACTACACAG CGAACACAGA GGCCTCAAGC AGGATTTGAT CCGGAAACAC 
AAGCAGGCCC TGCAGGCGTG CAAATCTCAC AATCTGTCGG TTCTGAAAAC TAACCAGCGA 
GCTGAAACTG AGGCTCTGGA TCAGCGGGTC AAAGACGAGC AAAGGATGAT GGACGAAAAG 
ATTGTGGCTG AAATGGACCA GAAGGTTCTG GATCAGCAGA ACACGCTGGA GAAAGCAGGC 
GTACCGGGTT TCTACATCAC CTCCAACCCA CAGGAGGTGA TGATGCAGAT GAATCTTCTG 
GAGCTTGTTC TGAAACTGCA GCAGAAGGAG ACTCTCTCTG GATCTTTGCC TTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa59954
Clone ID Related Accession (Same CDS sequence) XM_017357308.1 , XM_017357308.2
Accession Version XM_017357308.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 594bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-06-14
Organism Danio rerio(zebrafish)
Product protein DGCR6L isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007119.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_017357308.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
ATGGATCTGT ACTGTACTGT GAGTGGTGAT CAGTCTGATT CTGCCAGACA ACAGGAGAGA 
CATTATTACC TGCTGTCAGA GCTGCAGACG CTGGTGAAGG ACCTGTCAAG CTCGTTCCAG 
CAGCGTCTGT CCTACACCAC TCTCAGTGAT CTGGCTCAGG CGCTCATCGA TGGGACGGTC 
TATGAGATCG TTCAAGGCCT TCTGGATATT CAGCATCTGA CGGAGAAAAA CCTCTACAAC 
CAGAGACAGA AACTACACAG CGAACACAGA GGCCTCAAGC AGGATTTGAT CCGGAAACAC 
AAGCAGGCCC TGCAGGCGTG CAAATCTCAC AATCTGTCGG TTCTGAAAAC TAACCAGCGA 
GCTGAAACTG AGGCTCTGGA TCAGCGGGTC AAAGACGAGC AAAGGATGAT GGACGAAAAG 
ATTGTGGCTG AAATGGACCA GAAGGTTCTG GATCAGCAGA ACACGCTGGA GAAAGCAGGC 
GTACCGGGTT TCTACATCAC CTCCAACCCA CAGGAGGTGA TGATGCAGAT GAATCTTCTG 
GAGCTTGTTC TGAAACTGCA GCAGAAGGAG ACTCTCTCTG GATCTTTGCC TTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_017212797.1
CDS229..822
Translation

Target ORF information:

RefSeq Version XM_017357308.2
Organism Danio rerio(zebrafish)
Definition Danio rerio DiGeorge syndrome critical region gene 6 (dgcr6), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_017357308.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
ATGGATCTGT ACTGTACTGT GAGTGGTGAT CAGTCTGATT CTGCCAGACA ACAGGAGAGA 
CATTATTACC TGCTGTCAGA GCTGCAGACG CTGGTGAAGG ACCTGTCAAG CTCGTTCCAG 
CAGCGTCTGT CCTACACCAC TCTCAGTGAT CTGGCTCAGG CGCTCATCGA TGGGACGGTC 
TATGAGATCG TTCAAGGCCT TCTGGATATT CAGCATCTGA CGGAGAAAAA CCTCTACAAC 
CAGAGACAGA AACTACACAG CGAACACAGA GGCCTCAAGC AGGATTTGAT CCGGAAACAC 
AAGCAGGCCC TGCAGGCGTG CAAATCTCAC AATCTGTCGG TTCTGAAAAC TAACCAGCGA 
GCTGAAACTG AGGCTCTGGA TCAGCGGGTC AAAGACGAGC AAAGGATGAT GGACGAAAAG 
ATTGTGGCTG AAATGGACCA GAAGGTTCTG GATCAGCAGA ACACGCTGGA GAAAGCAGGC 
GTACCGGGTT TCTACATCAC CTCCAACCCA CAGGAGGTGA TGATGCAGAT GAATCTTCTG 
GAGCTTGTTC TGAAACTGCA GCAGAAGGAG ACTCTCTCTG GATCTTTGCC TTAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J


book

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R


book

Comparative mapping of the 22q11.2 deletion region and the potential of simple model organisms.
Journal of neurodevelopmental disorders7(1)18(2015)
Guna A,Butcher NJ,Bassett AS


book

Hematopoietic gene expression profile in zebrafish kidney marrow.
Proceedings of the National Academy of Sciences of the United States of America101(46)16240-5(2004 Nov)
Song HD,Sun XJ,Deng M,Zhang GW,Zhou Y,Wu XY,Sheng Y,Chen Y,Ruan Z,Jiang CL,Fan HY,Zon LI,Kanki JP,Liu TX,Look AT,Chen Z