Gene Symbol | wdr33 |
Entrez Gene ID | 449009 |
Full Name | WD repeat domain 33 |
Synonyms | zgc:110570 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » wdr33 cDNA ORF clone
Gene Symbol | wdr33 |
Entrez Gene ID | 449009 |
Full Name | WD repeat domain 33 |
Synonyms | zgc:110570 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
NM_001024221.2 | NP_001019392.2 | pre-mRNA 3' end processing protein WDR33 isoform 2 |
XM_009297073.3 | XP_009295348.1 | pre-mRNA 3' end processing protein WDR33 isoform X1 |
XM_005163232.4 | XP_005163289.1 | pre-mRNA 3' end processing protein WDR33 isoform X2 |
XM_009297073.2 | XP_009295348.1 | pre-mRNA 3' end processing protein WDR33 isoform X1 |
XM_005163232.3 | XP_005163289.1 | pre-mRNA 3' end processing protein WDR33 isoform X2 |
NM_001194928.1 | NP_001181857.1 | pre-mRNA 3' end processing protein WDR33 isoform 1 |
WDR33 | XP_001089955.2 | |
Kluyveromyces lactis | KLLA0E07085g | XP_454268.1 |
Mus musculus (house mouse) | Wdr33 | NP_083142.2 |
Saccharomyces cerevisiae (baker's yeast) | PFS2 | NP_014082.1 |
Schizosaccharomyces pombe (fission yeast) | pfs2 | NP_592884.1 |
Homo sapiens (human) | WDR33 | NP_060853.3 |
Pan troglodytes (chimpanzee) | WDR33 | XP_001139756.1 |
Canis lupus familiaris (dog) | WDR33 | XP_003639747.1 |
Rattus norvegicus (Norway rat) | Wdr33 | NP_001100868.2 |
Gallus gallus (chicken) | WDR33 | XP_004937012.1 |
Bos taurus (cattle) | WDR33 | NP_001193007.1 |
Eremothecium gossypii | AGOS_ADL184W | NP_983912.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_05325 | XP_003712889.1 |
Neurospora crassa | NCU00037 | XP_957024.2 |
Danio rerio (zebrafish) | wdr33 | NP_001181857.1 |
Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transition.
Despic V, Dejung M, Gu M, Krishnan J, Zhang J, Herzel L, Straube K, Gerstein MB, Butter F, Neugebauer KM
Genome research27(7)1184-1194(2017 Jul)
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
Combination of reverse and chemical genetic screens reveals angiogenesis inhibitors and targets.
Kal?n M, Wallgard E, Asker N, Nasevicius A, Athley E, Billgren E, Larson JD, Wadman SA, Norseng E, Clark KJ, He L, Karlsson-Lindahl L, H?ger AK, Weber H, Augustin H, Samuelsson T, Kemmet CK, Utesch CM, Essner JJ, Hackett PB, Hellstr?m M
Chemistry & biology16(4)432-41(2009 Apr)
Identification of 315 genes essential for early zebrafish development.
Amsterdam A, Nissen RM, Sun Z, Swindell EC, Farrington S, Hopkins N
Proceedings of the National Academy of Sciences of the United States of America101(35)12792-7(2004 Aug)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following wdr33 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the wdr33 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa30578 | |
Clone ID Related Accession (Same CDS sequence) | NM_001024221.2 | |
Accession Version | NM_001024221.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 873bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-11-23 | |
Organism | Danio rerio(zebrafish) | |
Product | pre-mRNA 3' end processing protein WDR33 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CU571377.3. On Aug 13, 2010 this sequence version replaced NM_001024221.1. Transcript Variant: This variant (2) lacks most 3' exons and has an alternate 3' segment, as compared to variant 1. The resulting isoform 2 is much shorter than isoform 1. Sequence Note: This RefSeq record was created from genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: BC095316.1, GDQQ01000643.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCGACTG ACATCGGCTC CCCTCCGCGG TTCTTCCATA TGCCTCGCTT CCAGCACCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001019392.2 |
CDS | 503..1375 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001024221.2 |
1 | ATGGCGACTG ACATCGGCTC CCCTCCGCGG TTCTTCCATA TGCCTCGCTT CCAGCACCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa30651 | |
Clone ID Related Accession (Same CDS sequence) | XM_009297073.3 , XM_009297073.2 , NM_001194928.1 | |
Accession Version | NM_001194928.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3309bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-11-23 | |
Organism | Danio rerio(zebrafish) | |
Product | pre-mRNA 3' end processing protein WDR33 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CU571377.3 and FP016178.5. On Aug 14, 2010 this sequence version replaced XM_001922349.2. Transcript Variant: This variant (1) represents the full-length transcript and encodes isoform 1. Sequence Note: This RefSeq record was created from genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: GDQH01002656.1, GFIL01043296.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCGACTG ACATCGGCTC CCCTCCGCGG TTCTTCCATA TGCCTCGCTT CCAGCACCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001181857.1 |
CDS | 503..3811 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001194928.1 |
1 | ATGGCGACTG ACATCGGCTC CCCTCCGCGG TTCTTCCATA TGCCTCGCTT CCAGCACCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa06665 | |
Clone ID Related Accession (Same CDS sequence) | XM_005163232.4 , XM_005163232.3 | |
Accession Version | XM_005163232.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3054bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | pre-mRNA 3' end processing protein WDR33 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007113.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005163232.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGACTG ACATCGGCTC CCCTCCGCGG TTCTTCCATA TGCCTCGCTT CCAGCACCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005163289.1 |
CDS | 519..3572 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005163232.4 |
1 | ATGGCGACTG ACATCGGCTC CCCTCCGCGG TTCTTCCATA TGCCTCGCTT CCAGCACCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa06665 | |
Clone ID Related Accession (Same CDS sequence) | XM_005163232.4 , XM_005163232.3 | |
Accession Version | XM_005163232.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3054bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | pre-mRNA 3' end processing protein WDR33 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007113.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005163232.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGACTG ACATCGGCTC CCCTCCGCGG TTCTTCCATA TGCCTCGCTT CCAGCACCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005163289.1 |
CDS | 529..3582 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005163232.3 |
1 | ATGGCGACTG ACATCGGCTC CCCTCCGCGG TTCTTCCATA TGCCTCGCTT CCAGCACCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa30651 | |
Clone ID Related Accession (Same CDS sequence) | XM_009297073.3 , XM_009297073.2 , NM_001194928.1 | |
Accession Version | XM_009297073.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3309bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | pre-mRNA 3' end processing protein WDR33 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007113.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_009297073.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGACTG ACATCGGCTC CCCTCCGCGG TTCTTCCATA TGCCTCGCTT CCAGCACCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009295348.1 |
CDS | 228..3536 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009297073.3 |
1 | ATGGCGACTG ACATCGGCTC CCCTCCGCGG TTCTTCCATA TGCCTCGCTT CCAGCACCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa30651 | |
Clone ID Related Accession (Same CDS sequence) | XM_009297073.3 , XM_009297073.2 , NM_001194928.1 | |
Accession Version | XM_009297073.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3309bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | pre-mRNA 3' end processing protein WDR33 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007113.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009297073.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGACTG ACATCGGCTC CCCTCCGCGG TTCTTCCATA TGCCTCGCTT CCAGCACCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009295348.1 |
CDS | 238..3546 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009297073.2 |
1 | ATGGCGACTG ACATCGGCTC CCCTCCGCGG TTCTTCCATA TGCCTCGCTT CCAGCACCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transition. |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
RFX transcription factors are essential for hearing in mice. |
Combination of reverse and chemical genetic screens reveals angiogenesis inhibitors and targets. |
Identification of 315 genes essential for early zebrafish development. |