Gene Symbol |
sugt1 |
Entrez Gene ID |
492489 |
Full Name |
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone |
Synonyms |
sgut1,wu:fd45a02,zgc:103668 |
General protein information |
- Preferred Names
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone
Names
protein SGT1 homolog
|
Gene Type |
protein-coding |
Organism |
Danio rerio(zebrafish) |
Pan troglodytes (chimpanzee) |
SUGT1 |
XP_003952448.1 |
Arabidopsis thaliana (thale cress) |
SGT1A |
NP_849429.1 |
Oryza sativa (rice) |
Os01g0624500 |
NP_001043620.1 |
Canis lupus familiaris (dog) |
SUGT1 |
XP_005633996.1 |
Mus musculus (house mouse) |
Sugt1 |
NP_080750.1 |
Rattus norvegicus (Norway rat) |
Sugt1 |
NP_001013069.1 |
Arabidopsis thaliana (thale cress) |
SGT1B |
NP_192865.1 |
Bos taurus (cattle) |
SUGT1 |
NP_001039668.1 |
Anopheles gambiae (African malaria mosquito) |
AgaP_AGAP006161 |
XP_316219.4 |
Xenopus tropicalis (tropical clawed frog) |
sugt1 |
NP_001016156.1 |
Homo sapiens (human) |
SUGT1 |
NP_001124384.1 |
|
SUGT1 |
XP_001084394.1 |
Gallus gallus (chicken) |
SUGT1 |
NP_001025994.2 |
Danio rerio (zebrafish) |
sgut1 |
NP_001007362.1 |
Drosophila melanogaster (fruit fly) |
Sgt1 |
NP_649783.2 |
Caenorhabditis elegans (roundworm) |
CELE_D1054.3 |
NP_505751.1 |
Related articles in PubMed
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following sugt1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the sugt1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
ODa31516 |
Clone ID Related Accession (Same CDS sequence) |
NM_001007361.1
|
Accession Version |
NM_001007361.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 969bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-01-17 |
Organism |
Danio rerio(zebrafish) |
Product |
protein SGT1 homolog |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC085582.1.
##Evidence-Data-START##
Transcript exon combination :: BC085582.1, BC164350.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961
| ATGGCAACTT GCGGGCGTTA CTCTGACAGT TTCATAGATG AGGATCCTAG GAGGGCCCTT GAGGAACTAA ATGAAGCATT GGGAGAGAAA GCAGATAATG CTGAATGGCT CTGCCAGCGA GCTTATGCCT ATATTCTGTT GAAAGAGTAC ACCAAAGCAA TTGATGATGC CAAGAAAGCC CAAGACCTGC AGCCAGGACT AGCACTTCCC TTTCTAAGAA TAGGAATTGC AGAGTATCAC CTACATAACT TTGTCGCTGC TCATCAGGCC CTCACAGCAG GAAGAGACCT TGACAGTTCT GTTGAAGAAT TTCAAACATG GATGCAGCAC TGTGAAACTG AAATGGCGAC ACACATTCCA AACAAAACTT CAGATTTGCA AACTACAACC CATGTCAAAC ATGATTGGTA CCAGACAGAG TCTCAAGTTG CAGTTACCAT CATGGTAAAA AATGCCAAGA AGGAGGGTGT GATTGTCAGC TTTGGCGAAA GGGAGTTGAC CGCTGTGGTA AAGCTTCCAT CAGGAGAGGA TTATTGTCTG AAGGTTCATC TTCTTCATCC TATTGTCCCA CAGCAGAGCA CATACAAGAT CCTTTCAACC AAGATAGAGA TTAAGATGAA GAAGACTGAA GCCATACAGT GGGAAAAACT TCAAGGAGAA GAGACACTCT CCAACGTGAA GCATTTTACT GCAAGCCAGT ATCCATCGTC ATCCCACTAC ACACGAAACT GGGACAAGTT AGTGGGAGAA ATAAAGGAGG AGGAAAAGAA GGAAAATCTG GAGGGTGATG CTGCTCTCAA CAAGCTTTTT CAACAGATCT ATTCGGATGG CTCGGATGAT GTCAGACGGG CAATGAACAA GTCTTTTATG GAATCAGGAG GCACTGTCCT CAGCACCAAC TGGATAGATG TTGGTAAACG GAAAGTAGAG ATGAACCCGC CTGATGACGT AGAGTGGAAA AAATATTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001007362.1 |
CDS | 105..1073 |
Translation | |
Target ORF information:
RefSeq Version | NM_001007361.1 |
Organism | Danio rerio(zebrafish) |
Definition | Danio rerio SGT1 homolog, MIS12 kinetochore complex assembly cochaperone (sugt1), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001007361.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961
| ATGGCAACTT GCGGGCGTTA CTCTGACAGT TTCATAGATG AGGATCCTAG GAGGGCCCTT GAGGAACTAA ATGAAGCATT GGGAGAGAAA GCAGATAATG CTGAATGGCT CTGCCAGCGA GCTTATGCCT ATATTCTGTT GAAAGAGTAC ACCAAAGCAA TTGATGATGC CAAGAAAGCC CAAGACCTGC AGCCAGGACT AGCACTTCCC TTTCTAAGAA TAGGAATTGC AGAGTATCAC CTACATAACT TTGTCGCTGC TCATCAGGCC CTCACAGCAG GAAGAGACCT TGACAGTTCT GTTGAAGAAT TTCAAACATG GATGCAGCAC TGTGAAACTG AAATGGCGAC ACACATTCCA AACAAAACTT CAGATTTGCA AACTACAACC CATGTCAAAC ATGATTGGTA CCAGACAGAG TCTCAAGTTG CAGTTACCAT CATGGTAAAA AATGCCAAGA AGGAGGGTGT GATTGTCAGC TTTGGCGAAA GGGAGTTGAC CGCTGTGGTA AAGCTTCCAT CAGGAGAGGA TTATTGTCTG AAGGTTCATC TTCTTCATCC TATTGTCCCA CAGCAGAGCA CATACAAGAT CCTTTCAACC AAGATAGAGA TTAAGATGAA GAAGACTGAA GCCATACAGT GGGAAAAACT TCAAGGAGAA GAGACACTCT CCAACGTGAA GCATTTTACT GCAAGCCAGT ATCCATCGTC ATCCCACTAC ACACGAAACT GGGACAAGTT AGTGGGAGAA ATAAAGGAGG AGGAAAAGAA GGAAAATCTG GAGGGTGATG CTGCTCTCAA CAAGCTTTTT CAACAGATCT ATTCGGATGG CTCGGATGAT GTCAGACGGG CAATGAACAA GTCTTTTATG GAATCAGGAG GCACTGTCCT CAGCACCAAC TGGATAGATG TTGGTAAACG GAAAGTAGAG ATGAACCCGC CTGATGACGT AGAGTGGAAA AAATATTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
ODa147238 |
Clone ID Related Accession (Same CDS sequence) |
XM_021473696.1
|
Accession Version |
XM_021473696.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 648bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2017-06-14 |
Organism |
Danio rerio(zebrafish) |
Product |
protein SGT1 homolog isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007112.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Danio rerio Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.4
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601
| ATGCAGCACT GTGAAACTGA AATGGCGACA CACATTCCAA ACAAAACTTC AGATTTGCAA ACTACAACCC ATGTCAAACA TGATTGGTAC CAGACAGAGT CTCAAGTTGC AGTTACCATC ATGGTAAAAA ATGCCAAGAA GGAGGGTGTG ATTGTCAGCT TTGGCGAAAG GGAGTTGACC GCTGTGGTAA AGCTTCCATC AGGAGAGGAT TATTGTCTGA AGGTTCATCT TCTTCATCCT ATTGTCCCAC AGCAGAGCAC ATACAAGATC CTTTCAACCA AGATAGAGAT TAAGATGAAG AAGACTGAAG CCATACAGTG GGAAAAACTT CAAGGAGAAG AGACACTCTC CAACGTGAAG CATTTTACTG CAAGCCAGTA TCCATCGTCA TCCCACTACA CACGAAACTG GGACAAGTTA GTGGGAGAAA TAAAGGAGGA GGAAAAGAAG GAAAATCTGG AGGGTGATGC TGCTCTCAAC AAGCTTTTTC AACAGATCTA TTCGGATGGC TCGGATGATG TCAGACGGGC AATGAACAAG TCTTTTATGG AATCAGGAGG CACTGTCCTC AGCACCAACT GGATAGATGT TGGTAAACGG AAAGTAGAGA TGAACCCGCC TGATGACGTA GAGTGGAAAA AATATTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_021329371.1 |
CDS | 366..1013 |
Translation | |
Target ORF information:
RefSeq Version | XM_021473696.1 |
Organism | Danio rerio(zebrafish) |
Definition | Danio rerio SGT1 homolog, MIS12 kinetochore complex assembly cochaperone (sgut1), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_021473696.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601
| ATGCAGCACT GTGAAACTGA AATGGCGACA CACATTCCAA ACAAAACTTC AGATTTGCAA ACTACAACCC ATGTCAAACA TGATTGGTAC CAGACAGAGT CTCAAGTTGC AGTTACCATC ATGGTAAAAA ATGCCAAGAA GGAGGGTGTG ATTGTCAGCT TTGGCGAAAG GGAGTTGACC GCTGTGGTAA AGCTTCCATC AGGAGAGGAT TATTGTCTGA AGGTTCATCT TCTTCATCCT ATTGTCCCAC AGCAGAGCAC ATACAAGATC CTTTCAACCA AGATAGAGAT TAAGATGAAG AAGACTGAAG CCATACAGTG GGAAAAACTT CAAGGAGAAG AGACACTCTC CAACGTGAAG CATTTTACTG CAAGCCAGTA TCCATCGTCA TCCCACTACA CACGAAACTG GGACAAGTTA GTGGGAGAAA TAAAGGAGGA GGAAAAGAAG GAAAATCTGG AGGGTGATGC TGCTCTCAAC AAGCTTTTTC AACAGATCTA TTCGGATGGC TCGGATGATG TCAGACGGGC AATGAACAAG TCTTTTATGG AATCAGGAGG CACTGTCCTC AGCACCAACT GGATAGATGT TGGTAAACGG AAAGTAGAGA TGAACCCGCC TGATGACGTA GAGTGGAAAA AATATTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J |