Gene Symbol | snx13 |
Entrez Gene ID | 503733 |
Full Name | sorting nexin 13 |
Synonyms | zgc:113125 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » snx13 cDNA ORF clone
Gene Symbol | snx13 |
Entrez Gene ID | 503733 |
Full Name | sorting nexin 13 |
Synonyms | zgc:113125 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_021468238.1 | XP_021323913.1 | sorting nexin-13 isoform X2 |
XM_017352390.1 | XP_017207879.1 | sorting nexin-13 |
XM_021468239.1 | XP_021323914.1 | sorting nexin-13 isoform X3 |
XM_021468240.1 | XP_021323915.1 | sorting nexin-13 isoform X4 |
XM_021468237.1 | XP_021323912.1 | sorting nexin-13 isoform X1 |
Homo sapiens (human) | SNX13 | NP_055947.1 |
Canis lupus familiaris (dog) | SNX13 | XP_005628645.1 |
SNX13 | XP_001103565.2 | |
Mus musculus (house mouse) | Snx13 | NP_001014973.2 |
Gallus gallus (chicken) | SNX13 | NP_001103225.1 |
Pan troglodytes (chimpanzee) | SNX13 | XP_518985.3 |
Bos taurus (cattle) | SNX13 | XP_003585999.2 |
Rattus norvegicus (Norway rat) | Snx13 | NP_001102178.1 |
Caenorhabditis elegans (roundworm) | CELE_Y116A8C.26 | NP_503026.2 |
Xenopus tropicalis (tropical clawed frog) | snx13 | XP_002933347.2 |
Danio rerio (zebrafish) | snx13 | XP_003200556.2 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following snx13 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the snx13 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa150192 | |
Clone ID Related Accession (Same CDS sequence) | XM_021468237.1 | |
Accession Version | XM_021468237.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2901bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | sorting nexin-13 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7) and transcript sequence (GFIL01039188.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 326 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## |
1 | ATGTTTGCAG AGGCCAGTCT GTCCATCTGG GGATGGGGGG GTCTGGGAGT CGTCCTCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021323912.1 |
CDS | 152..3052 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021468237.1 |
1 | ATGTTTGCAG AGGCCAGTCT GTCCATCTGG GGATGGGGGG GTCTGGGAGT CGTCCTCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa150193 | |
Clone ID Related Accession (Same CDS sequence) | XM_021468238.1 | |
Accession Version | XM_021468238.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2898bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | sorting nexin-13 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7) and transcript sequence (GFIL01039188.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 326 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## |
1 | ATGTTAAAGG CCAGTCTGTC CATCTGGGGA TGGGGGGGTC TGGGAGTCGT CCTCTTCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021323913.1 |
CDS | 255..3152 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021468238.1 |
1 | ATGTTAAAGG CCAGTCTGTC CATCTGGGGA TGGGGGGGTC TGGGAGTCGT CCTCTTCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa150194 | |
Clone ID Related Accession (Same CDS sequence) | XM_021468239.1 | |
Accession Version | XM_021468239.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2868bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | sorting nexin-13 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7) and transcript sequence (GFIL01039188.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 326 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## |
1 | ATGTTTGCAG AGGCCAGTCT GTCCATCTGG GGATGGGGGG GTCTGGGAGT CGTCCTCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021323914.1 |
CDS | 152..3019 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021468239.1 |
1 | ATGTTTGCAG AGGCCAGTCT GTCCATCTGG GGATGGGGGG GTCTGGGAGT CGTCCTCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa150195 | |
Clone ID Related Accession (Same CDS sequence) | XM_021468240.1 | |
Accession Version | XM_021468240.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2739bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | sorting nexin-13 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7) and transcript sequence (GFIL01039188.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 326 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## |
1 | ATGTTTGCAG AGGCCAGTCT GTCCATCTGG GGATGGGGGG GTCTGGGAGT CGTCCTCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021323915.1 |
CDS | 152..2890 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021468240.1 |
1 | ATGTTTGCAG AGGCCAGTCT GTCCATCTGG GGATGGGGGG GTCTGGGAGT CGTCCTCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa56214 | |
Clone ID Related Accession (Same CDS sequence) | XM_017352390.1 | |
Accession Version | XM_017352390.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2868bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | sorting nexin-13 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.6) and transcript sequence (GDQQ01022382.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 5 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## |
1 | ATGTTTGCAG AGGCCAGTCT GTCCATCTGG GGATGGGGGG GTCTGGGAGT CGTCCTCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017207879.1 |
CDS | 158..3025 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017352390.1 |
1 | ATGTTTGCAG AGGCCAGTCT GTCCATCTGG GGATGGGGGG GTCTGGGAGT CGTCCTCTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |