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pou2f3 cDNA ORF clone, Danio rerio(zebrafish)

Summary

Gene Symbol pou2f3
Entrez Gene ID 553427
Full Name POU class 2 homeobox 3
Synonyms zgc:136377,zgc:158534
General protein information
Preferred Names

POU class 2 homeobox 3

Names

POU domain, class 2, transcription factor 3
POU transcription factor
Gene Type protein-coding
Organism Danio rerio(zebrafish)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_005171993.3 XP_005172050.1 POU domain, class 2, transcription factor 3 isoform X1
XM_017356085.1 XP_017211574.1 POU domain, class 2, transcription factor 3 isoform X2
XM_005171994.3 XP_005172051.1 POU domain, class 2, transcription factor 3 isoform X1
XM_005171994.4 XP_005172051.1 POU domain, class 2, transcription factor 3 isoform X1
NM_001199683.1 NP_001186612.1 POU domain, class 2, transcription factor 3 isoform 1
XM_017356085.2 XP_017211574.1 POU domain, class 2, transcription factor 3 isoform X2
NM_001045255.2 NP_001038720.2 POU domain, class 2, transcription factor 3 isoform 2
XM_005171993.4 XP_005172050.1 POU domain, class 2, transcription factor 3 isoform X1

Pathways from BioSystems


Homologies


Homo sapiens (human) POU2F3 NP_055167.2
Bos taurus (cattle) POU2F3 NP_001192759.1
Mus musculus (house mouse) Pou2f3 NP_035269.2
Danio rerio (zebrafish) pou2f3 NP_001038720.2
Xenopus tropicalis (tropical clawed frog) pou2f3 XP_002935067.2
Pan troglodytes (chimpanzee) POU2F3 XP_001151894.3
Gallus gallus (chicken) POU2F3 XP_425799.4
POU2F3 XP_001100709.2
Canis lupus familiaris (dog) POU2F3 XP_005619723.1
Rattus norvegicus (Norway rat) Pou2f3 NP_001099215.1

Gene Ontology


Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following pou2f3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the pou2f3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa30675 NM_001045255.2
Latest version!		 Danio rerio POU class 2 homeobox 3 (pou2f3), transcript variant 2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00
ODa30760 NM_001199683.1
Latest version!		 Danio rerio POU class 2 homeobox 3 (pou2f3), transcript variant 1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00
ODa11040 XM_005171993.4
Latest version!		 Danio rerio POU class 2 homeobox 3 (pou2f3), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00
ODa11040 XM_005171994.4
Latest version!		 Danio rerio POU class 2 homeobox 3 (pou2f3), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00
ODa30675 XM_017356085.2
Latest version!		 Danio rerio POU class 2 homeobox 3 (pou2f3), transcript variant X3, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00
View Old Accession Versions >>
ODa11040 XM_005171994.3 Danio rerio POU class 2 homeobox 3 (pou2f3), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00
ODa30675 XM_017356085.1 Danio rerio POU class 2 homeobox 3 (pou2f3), transcript variant X3, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00
ODa11040 XM_005171993.3 Danio rerio POU class 2 homeobox 3 (pou2f3), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ODa30675
Clone ID Related Accession (Same CDS sequence) XM_017356085.1 , XM_017356085.2 , NM_001045255.2
Accession Version NM_001045255.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1194bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-03-07
Organism Danio rerio(zebrafish)
Product POU domain, class 2, transcription factor 3 isoform 2
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CT955996.8. On or before Dec 12, 2010 this sequence version replaced XM_002662147.1, NM_001045255.1. Transcript Variant: This variant (2) uses two alternate splice sites in the coding region compared to variant 1. The resulting protein (isoform 2) is shorter but has the same N- and C-termini compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: BC116523.1, GFIL01030985.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

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961
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ATGAGCACAG ACGCTGTTGA GCAGACAGAA TCTCAGCATG AACAAGCTGA CATTGAACAA 
AATGGCATCG ACTTCACCAG ACAAATTAAG ACCGAGAACC TGAACGATTC ACCACATTCT 
GGATCTTCAC ACAAGACATG CCACTTAACT CAGGGATCAC CGCTGCCTCC TGGCCAGCTG 
ACTGGGGAGA TGCCCTCCCT GCACCCTCTG CCGCAGCTCG TCCTGATGCC TGGATCTCAC 
CTGTCTTCTC CTTCATCATT CCTCCTCTCA CAGGCCCAGT CAGGACATCA AGCACTCCTG 
CCACCCAATC TGCTTTCCTT GCCATCCCAG ACTCAGACAG GACTTCTCCC GCACCAACCT 
GGTCTTGCAC TCACTCCACA GGCAATGGGC AGGTCAGGTC TCGCTGGTTC CTCTATGGAT 
GGACATCTGG ACATGTCTCA CTTACAGGTG CCTAAACATG TGGGATCGCC ACAAGATGAG 
CCCAATGACC TGGAGGAGCT GGAGCAGTTC GCTAAAGCCT TTAAACAGAG ACGCATTAAA 
CTAGGCTTTA CTCAGGGTGA TGTGGGTCTG GCCATGGGAA AGCTGTATGG AAATGACTTC 
AGTCAGACTA CCATCTCACG CTTTGAAGCT CTCAATCTAA GCTTCAAAAA CATGTGCAAG 
CTCAAGCCTT TACTGGAAAA GTGGCTAAGT GATGCAGAGA ATTCACCGTC TGACACCATG 
ACCAACACCA CTACTTTACC ACCCCTCATG GAGGGATATG GAAGGAAGAG AAAAAAGAGA 
ACAAGCATCG AAACGAACAT CAAGCTCACG CTTGAGAAAC GCTTTCTAGA TAACCCAAAA 
CCCAACTCTG AAGAGATTAC GCTGATCTCA GAGCAGCTGG CCATGGAGAA GGAGGTGGTG 
CGGGTTTGGT TCTGCAACCG GCGGCAGAAG GAGAAGAGGA TATACTGCCC AGTTTCCACT 
TCACCCATAA AACCTCACAA CTTCAACCCT CGTCTGCCTT CAACTTCCCG CTCCTTTAGT 
CCACTTACTT CTGGAGGTGT CTCATCAAGC TCCTCCCCTG GCAGCCCCAG CCGAGGCTCT 
TCCCCAGGCA CACTGTCCAC CACCTCCAGT CCGCTGACAG CACAGAGCGT CAACCAGACC 
TTTAACACTG CCGGATCGTG GTATCGCTGG AACACCGCCT CATACCATCA CTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001038720.2
CDS118..1311
Translation

Target ORF information:

RefSeq Version NM_001045255.2
Organism Danio rerio(zebrafish)
Definition Danio rerio POU class 2 homeobox 3 (pou2f3), transcript variant 2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001045255.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGAGCACAG ACGCTGTTGA GCAGACAGAA TCTCAGCATG AACAAGCTGA CATTGAACAA 
AATGGCATCG ACTTCACCAG ACAAATTAAG ACCGAGAACC TGAACGATTC ACCACATTCT 
GGATCTTCAC ACAAGACATG CCACTTAACT CAGGGATCAC CGCTGCCTCC TGGCCAGCTG 
ACTGGGGAGA TGCCCTCCCT GCACCCTCTG CCGCAGCTCG TCCTGATGCC TGGATCTCAC 
CTGTCTTCTC CTTCATCATT CCTCCTCTCA CAGGCCCAGT CAGGACATCA AGCACTCCTG 
CCACCCAATC TGCTTTCCTT GCCATCCCAG ACTCAGACAG GACTTCTCCC GCACCAACCT 
GGTCTTGCAC TCACTCCACA GGCAATGGGC AGGTCAGGTC TCGCTGGTTC CTCTATGGAT 
GGACATCTGG ACATGTCTCA CTTACAGGTG CCTAAACATG TGGGATCGCC ACAAGATGAG 
CCCAATGACC TGGAGGAGCT GGAGCAGTTC GCTAAAGCCT TTAAACAGAG ACGCATTAAA 
CTAGGCTTTA CTCAGGGTGA TGTGGGTCTG GCCATGGGAA AGCTGTATGG AAATGACTTC 
AGTCAGACTA CCATCTCACG CTTTGAAGCT CTCAATCTAA GCTTCAAAAA CATGTGCAAG 
CTCAAGCCTT TACTGGAAAA GTGGCTAAGT GATGCAGAGA ATTCACCGTC TGACACCATG 
ACCAACACCA CTACTTTACC ACCCCTCATG GAGGGATATG GAAGGAAGAG AAAAAAGAGA 
ACAAGCATCG AAACGAACAT CAAGCTCACG CTTGAGAAAC GCTTTCTAGA TAACCCAAAA 
CCCAACTCTG AAGAGATTAC GCTGATCTCA GAGCAGCTGG CCATGGAGAA GGAGGTGGTG 
CGGGTTTGGT TCTGCAACCG GCGGCAGAAG GAGAAGAGGA TATACTGCCC AGTTTCCACT 
TCACCCATAA AACCTCACAA CTTCAACCCT CGTCTGCCTT CAACTTCCCG CTCCTTTAGT 
CCACTTACTT CTGGAGGTGT CTCATCAAGC TCCTCCCCTG GCAGCCCCAG CCGAGGCTCT 
TCCCCAGGCA CACTGTCCAC CACCTCCAGT CCGCTGACAG CACAGAGCGT CAACCAGACC 
TTTAACACTG CCGGATCGTG GTATCGCTGG AACACCGCCT CATACCATCA CTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa30760
Clone ID Related Accession (Same CDS sequence) NM_001199683.1
Accession Version NM_001199683.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1197bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-03-07
Organism Danio rerio(zebrafish)
Product POU domain, class 2, transcription factor 3 isoform 1
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CT955996.8. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: BC129274.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN06350654, SAMN06645146 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGAGCACAG ACGCTGTTGA GCAGACAGAA TCTCAGCATG AACAAGCTGA CATTGAACAA 
AATGGCATCG ACTTCACCAG ACAAATTAAG ACCGAGAACC TGAACGATTC ACCACATTCT 
GGATCTTCAC ACAAGACATG CCACTTAACT CAGGGATCAC CGCTGCCTCC TGGCCAGCTG 
ACTGGGATGC CCTCCCTGCA CCCTCTGCCG CAGCTCGTCC TGATGCCTGG ATCTCACCTG 
TCTTCTCCTT CATCATTCCT CCTCTCACAG GCCCAGTCAG GACATCAAGG TCTGTCACTC 
CTGCCACCCA ATCTGCTTTC CTTGCCATCC CAGACTCAGA CAGGACTTCT CCCGCACCAA 
CCTGGTCTTG CACTCACTCC ACAGGCAATG GGCAGGTCAG GTCTCGCTGG TTCCTCTATG 
GATGGACATC TGGACATGTC TCACTTACAG GTGCCTAAAC ATGTGGGATC GCCACAAGAT 
GAGCCCAATG ACCTGGAGGA GCTGGAGCAG TTCGCTAAAG CCTTTAAACA GAGACGCATT 
AAACTAGGCT TTACTCAGGG TGATGTGGGT CTGGCCATGG GAAAGCTGTA TGGAAATGAC 
TTCAGTCAGA CTACCATCTC ACGCTTTGAA GCTCTCAATC TAAGCTTCAA AAACATGTGC 
AAGCTCAAGC CTTTACTGGA AAAGTGGCTA AGTGATGCAG AGAATTCACC GTCTGACACC 
ATGACCAACA CCACTACTTT ACCACCCCTC ATGGAGGGAT ATGGAAGGAA GAGAAAAAAG 
AGAACAAGCA TCGAAACGAA CATCAAGCTC ACGCTTGAGA AACGCTTTCT AGATAACCCA 
AAACCCAACT CTGAAGAGAT TACGCTGATC TCAGAGCAGC TGGCCATGGA GAAGGAGGTG 
GTGCGGGTTT GGTTCTGCAA CCGGCGGCAG AAGGAGAAGA GGATATACTG CCCAGTTTCC 
ACTTCACCCA TAAAACCTCA CAACTTCAAC CCTCGTCTGC CTTCAACTTC CCGCTCCTTT 
AGTCCACTTA CTTCTGGAGG TGTCTCATCA AGCTCCTCCC CTGGCAGCCC CAGCCGAGGC 
TCTTCCCCAG GCACACTGTC CACCACCTCC AGTCCGCTGA CAGCACAGAG CGTCAACCAG 
ACCTTTAACA CTGCCGGATC GTGGTATCGC TGGAACACCG CCTCATACCA TCACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001186612.1
CDS118..1314
Translation

Target ORF information:

RefSeq Version NM_001199683.1
Organism Danio rerio(zebrafish)
Definition Danio rerio POU class 2 homeobox 3 (pou2f3), transcript variant 1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001199683.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGAGCACAG ACGCTGTTGA GCAGACAGAA TCTCAGCATG AACAAGCTGA CATTGAACAA 
AATGGCATCG ACTTCACCAG ACAAATTAAG ACCGAGAACC TGAACGATTC ACCACATTCT 
GGATCTTCAC ACAAGACATG CCACTTAACT CAGGGATCAC CGCTGCCTCC TGGCCAGCTG 
ACTGGGATGC CCTCCCTGCA CCCTCTGCCG CAGCTCGTCC TGATGCCTGG ATCTCACCTG 
TCTTCTCCTT CATCATTCCT CCTCTCACAG GCCCAGTCAG GACATCAAGG TCTGTCACTC 
CTGCCACCCA ATCTGCTTTC CTTGCCATCC CAGACTCAGA CAGGACTTCT CCCGCACCAA 
CCTGGTCTTG CACTCACTCC ACAGGCAATG GGCAGGTCAG GTCTCGCTGG TTCCTCTATG 
GATGGACATC TGGACATGTC TCACTTACAG GTGCCTAAAC ATGTGGGATC GCCACAAGAT 
GAGCCCAATG ACCTGGAGGA GCTGGAGCAG TTCGCTAAAG CCTTTAAACA GAGACGCATT 
AAACTAGGCT TTACTCAGGG TGATGTGGGT CTGGCCATGG GAAAGCTGTA TGGAAATGAC 
TTCAGTCAGA CTACCATCTC ACGCTTTGAA GCTCTCAATC TAAGCTTCAA AAACATGTGC 
AAGCTCAAGC CTTTACTGGA AAAGTGGCTA AGTGATGCAG AGAATTCACC GTCTGACACC 
ATGACCAACA CCACTACTTT ACCACCCCTC ATGGAGGGAT ATGGAAGGAA GAGAAAAAAG 
AGAACAAGCA TCGAAACGAA CATCAAGCTC ACGCTTGAGA AACGCTTTCT AGATAACCCA 
AAACCCAACT CTGAAGAGAT TACGCTGATC TCAGAGCAGC TGGCCATGGA GAAGGAGGTG 
GTGCGGGTTT GGTTCTGCAA CCGGCGGCAG AAGGAGAAGA GGATATACTG CCCAGTTTCC 
ACTTCACCCA TAAAACCTCA CAACTTCAAC CCTCGTCTGC CTTCAACTTC CCGCTCCTTT 
AGTCCACTTA CTTCTGGAGG TGTCTCATCA AGCTCCTCCC CTGGCAGCCC CAGCCGAGGC 
TCTTCCCCAG GCACACTGTC CACCACCTCC AGTCCGCTGA CAGCACAGAG CGTCAACCAG 
ACCTTTAACA CTGCCGGATC GTGGTATCGC TGGAACACCG CCTCATACCA TCACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa11040
Clone ID Related Accession (Same CDS sequence) XM_005171993.3 , XM_005171994.3 , XM_005171994.4 , XM_005171993.4
Accession Version XM_005171993.3 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1200bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-23
Organism Danio rerio(Zebrafish)
Product POU domain, class 2, transcription factor 3 isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007116.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005171993.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
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841
901
961
1021
1081
1141
ATGAGCACAG ACGCTGTTGA GCAGACAGAA TCTCAGCATG AACAAGCTGA CATTGAACAA 
AATGGCATCG ACTTCACCAG ACAAATTAAG ACCGAGAACC TGAACGATTC ACCACATTCT 
GGATCTTCAC ACAAGACATG CCACTTAACT CAGGGATCAC CGCTGCCTCC TGGCCAGCTG 
ACTGGGGAGA TGCCCTCCCT GCACCCTCTG CCGCAGCTCG TCCTGATGCC TGGATCTCAC 
CTGTCTTCTC CTTCATCATT CCTCCTCTCA CAGGCCCAGT CAGGACATCA AGGTCTGTCA 
CTCCTGCCAC CCAATCTGCT TTCCTTGCCA TCCCAGACTC AGACAGGACT TCTCCCGCAC 
CAACCTGGTC TTGCACTCAC TCCACAGGCA ATGGGCAGGT CAGGTCTCGC TGGTTCCTCT 
ATGGATGGAC ATCTGGACAT GTCTCACTTA CAGGTGCCTA AACATGTGGG ATCGCCACAA 
GATGAGCCCA ATGACCTGGA GGAGCTGGAG CAGTTCGCTA AAGCCTTTAA ACAGAGACGC 
ATTAAACTAG GCTTTACTCA GGGTGATGTG GGTCTGGCCA TGGGAAAGCT GTATGGAAAT 
GACTTCAGTC AGACTACCAT CTCACGCTTT GAAGCTCTCA ATCTAAGCTT CAAAAACATG 
TGCAAGCTCA AGCCTTTACT GGAAAAGTGG CTAAGTGATG CAGAGAATTC ACCGTCTGAC 
ACCATGACCA ACACCACTAC TTTACCACCC CTCATGGAGG GATATGGAAG GAAGAGAAAA 
AAGAGAACAA GCATCGAAAC GAACATCAAG CTCACGCTTG AGAAACGCTT TCTAGATAAC 
CCAAAACCCA ACTCTGAAGA GATTACGCTG ATCTCAGAGC AGCTGGCCAT GGAGAAGGAG 
GTGGTGCGGG TTTGGTTCTG CAACCGGCGG CAGAAGGAGA AGAGGATATA CTGCCCAGTT 
TCCACTTCAC CCATAAAACC TCACAACTTC AACCCTCGTC TGCCTTCAAC TTCCCGCTCC 
TTTAGTCCAC TTACTTCTGG AGGTGTCTCA TCAAGCTCCT CCCCTGGCAG CCCCAGCCGA 
GGCTCTTCCC CAGGCACACT GTCCACCACC TCCAGTCCGC TGACAGCACA GAGCGTCAAC 
CAGACCTTTA ACACTGCCGG ATCGTGGTAT CGCTGGAACA CCGCCTCATA CCATCACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005172050.1
CDS286..1485
Translation

Target ORF information:

RefSeq Version XM_005171993.3
Organism Danio rerio(Zebrafish)
Definition Danio rerio POU class 2 homeobox 3 (pou2f3), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005171993.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGAGCACAG ACGCTGTTGA GCAGACAGAA TCTCAGCATG AACAAGCTGA CATTGAACAA 
AATGGCATCG ACTTCACCAG ACAAATTAAG ACCGAGAACC TGAACGATTC ACCACATTCT 
GGATCTTCAC ACAAGACATG CCACTTAACT CAGGGATCAC CGCTGCCTCC TGGCCAGCTG 
ACTGGGGAGA TGCCCTCCCT GCACCCTCTG CCGCAGCTCG TCCTGATGCC TGGATCTCAC 
CTGTCTTCTC CTTCATCATT CCTCCTCTCA CAGGCCCAGT CAGGACATCA AGGTCTGTCA 
CTCCTGCCAC CCAATCTGCT TTCCTTGCCA TCCCAGACTC AGACAGGACT TCTCCCGCAC 
CAACCTGGTC TTGCACTCAC TCCACAGGCA ATGGGCAGGT CAGGTCTCGC TGGTTCCTCT 
ATGGATGGAC ATCTGGACAT GTCTCACTTA CAGGTGCCTA AACATGTGGG ATCGCCACAA 
GATGAGCCCA ATGACCTGGA GGAGCTGGAG CAGTTCGCTA AAGCCTTTAA ACAGAGACGC 
ATTAAACTAG GCTTTACTCA GGGTGATGTG GGTCTGGCCA TGGGAAAGCT GTATGGAAAT 
GACTTCAGTC AGACTACCAT CTCACGCTTT GAAGCTCTCA ATCTAAGCTT CAAAAACATG 
TGCAAGCTCA AGCCTTTACT GGAAAAGTGG CTAAGTGATG CAGAGAATTC ACCGTCTGAC 
ACCATGACCA ACACCACTAC TTTACCACCC CTCATGGAGG GATATGGAAG GAAGAGAAAA 
AAGAGAACAA GCATCGAAAC GAACATCAAG CTCACGCTTG AGAAACGCTT TCTAGATAAC 
CCAAAACCCA ACTCTGAAGA GATTACGCTG ATCTCAGAGC AGCTGGCCAT GGAGAAGGAG 
GTGGTGCGGG TTTGGTTCTG CAACCGGCGG CAGAAGGAGA AGAGGATATA CTGCCCAGTT 
TCCACTTCAC CCATAAAACC TCACAACTTC AACCCTCGTC TGCCTTCAAC TTCCCGCTCC 
TTTAGTCCAC TTACTTCTGG AGGTGTCTCA TCAAGCTCCT CCCCTGGCAG CCCCAGCCGA 
GGCTCTTCCC CAGGCACACT GTCCACCACC TCCAGTCCGC TGACAGCACA GAGCGTCAAC 
CAGACCTTTA ACACTGCCGG ATCGTGGTAT CGCTGGAACA CCGCCTCATA CCATCACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa11040
Clone ID Related Accession (Same CDS sequence) XM_005171993.3 , XM_005171994.3 , XM_005171994.4 , XM_005171993.4
Accession Version XM_005171994.3 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1200bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-23
Organism Danio rerio(Zebrafish)
Product POU domain, class 2, transcription factor 3 isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007116.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005171994.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGAGCACAG ACGCTGTTGA GCAGACAGAA TCTCAGCATG AACAAGCTGA CATTGAACAA 
AATGGCATCG ACTTCACCAG ACAAATTAAG ACCGAGAACC TGAACGATTC ACCACATTCT 
GGATCTTCAC ACAAGACATG CCACTTAACT CAGGGATCAC CGCTGCCTCC TGGCCAGCTG 
ACTGGGGAGA TGCCCTCCCT GCACCCTCTG CCGCAGCTCG TCCTGATGCC TGGATCTCAC 
CTGTCTTCTC CTTCATCATT CCTCCTCTCA CAGGCCCAGT CAGGACATCA AGGTCTGTCA 
CTCCTGCCAC CCAATCTGCT TTCCTTGCCA TCCCAGACTC AGACAGGACT TCTCCCGCAC 
CAACCTGGTC TTGCACTCAC TCCACAGGCA ATGGGCAGGT CAGGTCTCGC TGGTTCCTCT 
ATGGATGGAC ATCTGGACAT GTCTCACTTA CAGGTGCCTA AACATGTGGG ATCGCCACAA 
GATGAGCCCA ATGACCTGGA GGAGCTGGAG CAGTTCGCTA AAGCCTTTAA ACAGAGACGC 
ATTAAACTAG GCTTTACTCA GGGTGATGTG GGTCTGGCCA TGGGAAAGCT GTATGGAAAT 
GACTTCAGTC AGACTACCAT CTCACGCTTT GAAGCTCTCA ATCTAAGCTT CAAAAACATG 
TGCAAGCTCA AGCCTTTACT GGAAAAGTGG CTAAGTGATG CAGAGAATTC ACCGTCTGAC 
ACCATGACCA ACACCACTAC TTTACCACCC CTCATGGAGG GATATGGAAG GAAGAGAAAA 
AAGAGAACAA GCATCGAAAC GAACATCAAG CTCACGCTTG AGAAACGCTT TCTAGATAAC 
CCAAAACCCA ACTCTGAAGA GATTACGCTG ATCTCAGAGC AGCTGGCCAT GGAGAAGGAG 
GTGGTGCGGG TTTGGTTCTG CAACCGGCGG CAGAAGGAGA AGAGGATATA CTGCCCAGTT 
TCCACTTCAC CCATAAAACC TCACAACTTC AACCCTCGTC TGCCTTCAAC TTCCCGCTCC 
TTTAGTCCAC TTACTTCTGG AGGTGTCTCA TCAAGCTCCT CCCCTGGCAG CCCCAGCCGA 
GGCTCTTCCC CAGGCACACT GTCCACCACC TCCAGTCCGC TGACAGCACA GAGCGTCAAC 
CAGACCTTTA ACACTGCCGG ATCGTGGTAT CGCTGGAACA CCGCCTCATA CCATCACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005172051.1
CDS197..1396
Translation

Target ORF information:

RefSeq Version XM_005171994.3
Organism Danio rerio(Zebrafish)
Definition Danio rerio POU class 2 homeobox 3 (pou2f3), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005171994.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGAGCACAG ACGCTGTTGA GCAGACAGAA TCTCAGCATG AACAAGCTGA CATTGAACAA 
AATGGCATCG ACTTCACCAG ACAAATTAAG ACCGAGAACC TGAACGATTC ACCACATTCT 
GGATCTTCAC ACAAGACATG CCACTTAACT CAGGGATCAC CGCTGCCTCC TGGCCAGCTG 
ACTGGGGAGA TGCCCTCCCT GCACCCTCTG CCGCAGCTCG TCCTGATGCC TGGATCTCAC 
CTGTCTTCTC CTTCATCATT CCTCCTCTCA CAGGCCCAGT CAGGACATCA AGGTCTGTCA 
CTCCTGCCAC CCAATCTGCT TTCCTTGCCA TCCCAGACTC AGACAGGACT TCTCCCGCAC 
CAACCTGGTC TTGCACTCAC TCCACAGGCA ATGGGCAGGT CAGGTCTCGC TGGTTCCTCT 
ATGGATGGAC ATCTGGACAT GTCTCACTTA CAGGTGCCTA AACATGTGGG ATCGCCACAA 
GATGAGCCCA ATGACCTGGA GGAGCTGGAG CAGTTCGCTA AAGCCTTTAA ACAGAGACGC 
ATTAAACTAG GCTTTACTCA GGGTGATGTG GGTCTGGCCA TGGGAAAGCT GTATGGAAAT 
GACTTCAGTC AGACTACCAT CTCACGCTTT GAAGCTCTCA ATCTAAGCTT CAAAAACATG 
TGCAAGCTCA AGCCTTTACT GGAAAAGTGG CTAAGTGATG CAGAGAATTC ACCGTCTGAC 
ACCATGACCA ACACCACTAC TTTACCACCC CTCATGGAGG GATATGGAAG GAAGAGAAAA 
AAGAGAACAA GCATCGAAAC GAACATCAAG CTCACGCTTG AGAAACGCTT TCTAGATAAC 
CCAAAACCCA ACTCTGAAGA GATTACGCTG ATCTCAGAGC AGCTGGCCAT GGAGAAGGAG 
GTGGTGCGGG TTTGGTTCTG CAACCGGCGG CAGAAGGAGA AGAGGATATA CTGCCCAGTT 
TCCACTTCAC CCATAAAACC TCACAACTTC AACCCTCGTC TGCCTTCAAC TTCCCGCTCC 
TTTAGTCCAC TTACTTCTGG AGGTGTCTCA TCAAGCTCCT CCCCTGGCAG CCCCAGCCGA 
GGCTCTTCCC CAGGCACACT GTCCACCACC TCCAGTCCGC TGACAGCACA GAGCGTCAAC 
CAGACCTTTA ACACTGCCGG ATCGTGGTAT CGCTGGAACA CCGCCTCATA CCATCACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa11040
Clone ID Related Accession (Same CDS sequence) XM_005171993.3 , XM_005171994.3 , XM_005171994.4 , XM_005171993.4
Accession Version XM_005171994.4 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1200bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-06-14
Organism Danio rerio(zebrafish)
Product POU domain, class 2, transcription factor 3 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007116.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005171994.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGAGCACAG ACGCTGTTGA GCAGACAGAA TCTCAGCATG AACAAGCTGA CATTGAACAA 
AATGGCATCG ACTTCACCAG ACAAATTAAG ACCGAGAACC TGAACGATTC ACCACATTCT 
GGATCTTCAC ACAAGACATG CCACTTAACT CAGGGATCAC CGCTGCCTCC TGGCCAGCTG 
ACTGGGGAGA TGCCCTCCCT GCACCCTCTG CCGCAGCTCG TCCTGATGCC TGGATCTCAC 
CTGTCTTCTC CTTCATCATT CCTCCTCTCA CAGGCCCAGT CAGGACATCA AGGTCTGTCA 
CTCCTGCCAC CCAATCTGCT TTCCTTGCCA TCCCAGACTC AGACAGGACT TCTCCCGCAC 
CAACCTGGTC TTGCACTCAC TCCACAGGCA ATGGGCAGGT CAGGTCTCGC TGGTTCCTCT 
ATGGATGGAC ATCTGGACAT GTCTCACTTA CAGGTGCCTA AACATGTGGG ATCGCCACAA 
GATGAGCCCA ATGACCTGGA GGAGCTGGAG CAGTTCGCTA AAGCCTTTAA ACAGAGACGC 
ATTAAACTAG GCTTTACTCA GGGTGATGTG GGTCTGGCCA TGGGAAAGCT GTATGGAAAT 
GACTTCAGTC AGACTACCAT CTCACGCTTT GAAGCTCTCA ATCTAAGCTT CAAAAACATG 
TGCAAGCTCA AGCCTTTACT GGAAAAGTGG CTAAGTGATG CAGAGAATTC ACCGTCTGAC 
ACCATGACCA ACACCACTAC TTTACCACCC CTCATGGAGG GATATGGAAG GAAGAGAAAA 
AAGAGAACAA GCATCGAAAC GAACATCAAG CTCACGCTTG AGAAACGCTT TCTAGATAAC 
CCAAAACCCA ACTCTGAAGA GATTACGCTG ATCTCAGAGC AGCTGGCCAT GGAGAAGGAG 
GTGGTGCGGG TTTGGTTCTG CAACCGGCGG CAGAAGGAGA AGAGGATATA CTGCCCAGTT 
TCCACTTCAC CCATAAAACC TCACAACTTC AACCCTCGTC TGCCTTCAAC TTCCCGCTCC 
TTTAGTCCAC TTACTTCTGG AGGTGTCTCA TCAAGCTCCT CCCCTGGCAG CCCCAGCCGA 
GGCTCTTCCC CAGGCACACT GTCCACCACC TCCAGTCCGC TGACAGCACA GAGCGTCAAC 
CAGACCTTTA ACACTGCCGG ATCGTGGTAT CGCTGGAACA CCGCCTCATA CCATCACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005172051.1
CDS228..1427
Translation

Target ORF information:

RefSeq Version XM_005171994.4
Organism Danio rerio(zebrafish)
Definition Danio rerio POU class 2 homeobox 3 (pou2f3), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005171994.4

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGAGCACAG ACGCTGTTGA GCAGACAGAA TCTCAGCATG AACAAGCTGA CATTGAACAA 
AATGGCATCG ACTTCACCAG ACAAATTAAG ACCGAGAACC TGAACGATTC ACCACATTCT 
GGATCTTCAC ACAAGACATG CCACTTAACT CAGGGATCAC CGCTGCCTCC TGGCCAGCTG 
ACTGGGGAGA TGCCCTCCCT GCACCCTCTG CCGCAGCTCG TCCTGATGCC TGGATCTCAC 
CTGTCTTCTC CTTCATCATT CCTCCTCTCA CAGGCCCAGT CAGGACATCA AGGTCTGTCA 
CTCCTGCCAC CCAATCTGCT TTCCTTGCCA TCCCAGACTC AGACAGGACT TCTCCCGCAC 
CAACCTGGTC TTGCACTCAC TCCACAGGCA ATGGGCAGGT CAGGTCTCGC TGGTTCCTCT 
ATGGATGGAC ATCTGGACAT GTCTCACTTA CAGGTGCCTA AACATGTGGG ATCGCCACAA 
GATGAGCCCA ATGACCTGGA GGAGCTGGAG CAGTTCGCTA AAGCCTTTAA ACAGAGACGC 
ATTAAACTAG GCTTTACTCA GGGTGATGTG GGTCTGGCCA TGGGAAAGCT GTATGGAAAT 
GACTTCAGTC AGACTACCAT CTCACGCTTT GAAGCTCTCA ATCTAAGCTT CAAAAACATG 
TGCAAGCTCA AGCCTTTACT GGAAAAGTGG CTAAGTGATG CAGAGAATTC ACCGTCTGAC 
ACCATGACCA ACACCACTAC TTTACCACCC CTCATGGAGG GATATGGAAG GAAGAGAAAA 
AAGAGAACAA GCATCGAAAC GAACATCAAG CTCACGCTTG AGAAACGCTT TCTAGATAAC 
CCAAAACCCA ACTCTGAAGA GATTACGCTG ATCTCAGAGC AGCTGGCCAT GGAGAAGGAG 
GTGGTGCGGG TTTGGTTCTG CAACCGGCGG CAGAAGGAGA AGAGGATATA CTGCCCAGTT 
TCCACTTCAC CCATAAAACC TCACAACTTC AACCCTCGTC TGCCTTCAAC TTCCCGCTCC 
TTTAGTCCAC TTACTTCTGG AGGTGTCTCA TCAAGCTCCT CCCCTGGCAG CCCCAGCCGA 
GGCTCTTCCC CAGGCACACT GTCCACCACC TCCAGTCCGC TGACAGCACA GAGCGTCAAC 
CAGACCTTTA ACACTGCCGG ATCGTGGTAT CGCTGGAACA CCGCCTCATA CCATCACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa11040
Clone ID Related Accession (Same CDS sequence) XM_005171993.3 , XM_005171994.3 , XM_005171994.4 , XM_005171993.4
Accession Version XM_005171993.4 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1200bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-06-14
Organism Danio rerio(zebrafish)
Product POU domain, class 2, transcription factor 3 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007116.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005171993.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGAGCACAG ACGCTGTTGA GCAGACAGAA TCTCAGCATG AACAAGCTGA CATTGAACAA 
AATGGCATCG ACTTCACCAG ACAAATTAAG ACCGAGAACC TGAACGATTC ACCACATTCT 
GGATCTTCAC ACAAGACATG CCACTTAACT CAGGGATCAC CGCTGCCTCC TGGCCAGCTG 
ACTGGGGAGA TGCCCTCCCT GCACCCTCTG CCGCAGCTCG TCCTGATGCC TGGATCTCAC 
CTGTCTTCTC CTTCATCATT CCTCCTCTCA CAGGCCCAGT CAGGACATCA AGGTCTGTCA 
CTCCTGCCAC CCAATCTGCT TTCCTTGCCA TCCCAGACTC AGACAGGACT TCTCCCGCAC 
CAACCTGGTC TTGCACTCAC TCCACAGGCA ATGGGCAGGT CAGGTCTCGC TGGTTCCTCT 
ATGGATGGAC ATCTGGACAT GTCTCACTTA CAGGTGCCTA AACATGTGGG ATCGCCACAA 
GATGAGCCCA ATGACCTGGA GGAGCTGGAG CAGTTCGCTA AAGCCTTTAA ACAGAGACGC 
ATTAAACTAG GCTTTACTCA GGGTGATGTG GGTCTGGCCA TGGGAAAGCT GTATGGAAAT 
GACTTCAGTC AGACTACCAT CTCACGCTTT GAAGCTCTCA ATCTAAGCTT CAAAAACATG 
TGCAAGCTCA AGCCTTTACT GGAAAAGTGG CTAAGTGATG CAGAGAATTC ACCGTCTGAC 
ACCATGACCA ACACCACTAC TTTACCACCC CTCATGGAGG GATATGGAAG GAAGAGAAAA 
AAGAGAACAA GCATCGAAAC GAACATCAAG CTCACGCTTG AGAAACGCTT TCTAGATAAC 
CCAAAACCCA ACTCTGAAGA GATTACGCTG ATCTCAGAGC AGCTGGCCAT GGAGAAGGAG 
GTGGTGCGGG TTTGGTTCTG CAACCGGCGG CAGAAGGAGA AGAGGATATA CTGCCCAGTT 
TCCACTTCAC CCATAAAACC TCACAACTTC AACCCTCGTC TGCCTTCAAC TTCCCGCTCC 
TTTAGTCCAC TTACTTCTGG AGGTGTCTCA TCAAGCTCCT CCCCTGGCAG CCCCAGCCGA 
GGCTCTTCCC CAGGCACACT GTCCACCACC TCCAGTCCGC TGACAGCACA GAGCGTCAAC 
CAGACCTTTA ACACTGCCGG ATCGTGGTAT CGCTGGAACA CCGCCTCATA CCATCACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005172050.1
CDS287..1486
Translation

Target ORF information:

RefSeq Version XM_005171993.4
Organism Danio rerio(zebrafish)
Definition Danio rerio POU class 2 homeobox 3 (pou2f3), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005171993.4

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGAGCACAG ACGCTGTTGA GCAGACAGAA TCTCAGCATG AACAAGCTGA CATTGAACAA 
AATGGCATCG ACTTCACCAG ACAAATTAAG ACCGAGAACC TGAACGATTC ACCACATTCT 
GGATCTTCAC ACAAGACATG CCACTTAACT CAGGGATCAC CGCTGCCTCC TGGCCAGCTG 
ACTGGGGAGA TGCCCTCCCT GCACCCTCTG CCGCAGCTCG TCCTGATGCC TGGATCTCAC 
CTGTCTTCTC CTTCATCATT CCTCCTCTCA CAGGCCCAGT CAGGACATCA AGGTCTGTCA 
CTCCTGCCAC CCAATCTGCT TTCCTTGCCA TCCCAGACTC AGACAGGACT TCTCCCGCAC 
CAACCTGGTC TTGCACTCAC TCCACAGGCA ATGGGCAGGT CAGGTCTCGC TGGTTCCTCT 
ATGGATGGAC ATCTGGACAT GTCTCACTTA CAGGTGCCTA AACATGTGGG ATCGCCACAA 
GATGAGCCCA ATGACCTGGA GGAGCTGGAG CAGTTCGCTA AAGCCTTTAA ACAGAGACGC 
ATTAAACTAG GCTTTACTCA GGGTGATGTG GGTCTGGCCA TGGGAAAGCT GTATGGAAAT 
GACTTCAGTC AGACTACCAT CTCACGCTTT GAAGCTCTCA ATCTAAGCTT CAAAAACATG 
TGCAAGCTCA AGCCTTTACT GGAAAAGTGG CTAAGTGATG CAGAGAATTC ACCGTCTGAC 
ACCATGACCA ACACCACTAC TTTACCACCC CTCATGGAGG GATATGGAAG GAAGAGAAAA 
AAGAGAACAA GCATCGAAAC GAACATCAAG CTCACGCTTG AGAAACGCTT TCTAGATAAC 
CCAAAACCCA ACTCTGAAGA GATTACGCTG ATCTCAGAGC AGCTGGCCAT GGAGAAGGAG 
GTGGTGCGGG TTTGGTTCTG CAACCGGCGG CAGAAGGAGA AGAGGATATA CTGCCCAGTT 
TCCACTTCAC CCATAAAACC TCACAACTTC AACCCTCGTC TGCCTTCAAC TTCCCGCTCC 
TTTAGTCCAC TTACTTCTGG AGGTGTCTCA TCAAGCTCCT CCCCTGGCAG CCCCAGCCGA 
GGCTCTTCCC CAGGCACACT GTCCACCACC TCCAGTCCGC TGACAGCACA GAGCGTCAAC 
CAGACCTTTA ACACTGCCGG ATCGTGGTAT CGCTGGAACA CCGCCTCATA CCATCACTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa30675
Clone ID Related Accession (Same CDS sequence) XM_017356085.1 , XM_017356085.2 , NM_001045255.2
Accession Version XM_017356085.1 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1194bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-23
Organism Danio rerio(Zebrafish)
Product POU domain, class 2, transcription factor 3 isoform X2
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007116.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGAGCACAG ACGCTGTTGA GCAGACAGAA TCTCAGCATG AACAAGCTGA CATTGAACAA 
AATGGCATCG ACTTCACCAG ACAAATTAAG ACCGAGAACC TGAACGATTC ACCACATTCT 
GGATCTTCAC ACAAGACATG CCACTTAACT CAGGGATCAC CGCTGCCTCC TGGCCAGCTG 
ACTGGGGAGA TGCCCTCCCT GCACCCTCTG CCGCAGCTCG TCCTGATGCC TGGATCTCAC 
CTGTCTTCTC CTTCATCATT CCTCCTCTCA CAGGCCCAGT CAGGACATCA AGCACTCCTG 
CCACCCAATC TGCTTTCCTT GCCATCCCAG ACTCAGACAG GACTTCTCCC GCACCAACCT 
GGTCTTGCAC TCACTCCACA GGCAATGGGC AGGTCAGGTC TCGCTGGTTC CTCTATGGAT 
GGACATCTGG ACATGTCTCA CTTACAGGTG CCTAAACATG TGGGATCGCC ACAAGATGAG 
CCCAATGACC TGGAGGAGCT GGAGCAGTTC GCTAAAGCCT TTAAACAGAG ACGCATTAAA 
CTAGGCTTTA CTCAGGGTGA TGTGGGTCTG GCCATGGGAA AGCTGTATGG AAATGACTTC 
AGTCAGACTA CCATCTCACG CTTTGAAGCT CTCAATCTAA GCTTCAAAAA CATGTGCAAG 
CTCAAGCCTT TACTGGAAAA GTGGCTAAGT GATGCAGAGA ATTCACCGTC TGACACCATG 
ACCAACACCA CTACTTTACC ACCCCTCATG GAGGGATATG GAAGGAAGAG AAAAAAGAGA 
ACAAGCATCG AAACGAACAT CAAGCTCACG CTTGAGAAAC GCTTTCTAGA TAACCCAAAA 
CCCAACTCTG AAGAGATTAC GCTGATCTCA GAGCAGCTGG CCATGGAGAA GGAGGTGGTG 
CGGGTTTGGT TCTGCAACCG GCGGCAGAAG GAGAAGAGGA TATACTGCCC AGTTTCCACT 
TCACCCATAA AACCTCACAA CTTCAACCCT CGTCTGCCTT CAACTTCCCG CTCCTTTAGT 
CCACTTACTT CTGGAGGTGT CTCATCAAGC TCCTCCCCTG GCAGCCCCAG CCGAGGCTCT 
TCCCCAGGCA CACTGTCCAC CACCTCCAGT CCGCTGACAG CACAGAGCGT CAACCAGACC 
TTTAACACTG CCGGATCGTG GTATCGCTGG AACACCGCCT CATACCATCA CTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_017211574.1
CDS195..1388
Translation

Target ORF information:

RefSeq Version XM_017356085.1
Organism Danio rerio(Zebrafish)
Definition Danio rerio POU class 2 homeobox 3 (pou2f3), transcript variant X3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_017356085.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGAGCACAG ACGCTGTTGA GCAGACAGAA TCTCAGCATG AACAAGCTGA CATTGAACAA 
AATGGCATCG ACTTCACCAG ACAAATTAAG ACCGAGAACC TGAACGATTC ACCACATTCT 
GGATCTTCAC ACAAGACATG CCACTTAACT CAGGGATCAC CGCTGCCTCC TGGCCAGCTG 
ACTGGGGAGA TGCCCTCCCT GCACCCTCTG CCGCAGCTCG TCCTGATGCC TGGATCTCAC 
CTGTCTTCTC CTTCATCATT CCTCCTCTCA CAGGCCCAGT CAGGACATCA AGCACTCCTG 
CCACCCAATC TGCTTTCCTT GCCATCCCAG ACTCAGACAG GACTTCTCCC GCACCAACCT 
GGTCTTGCAC TCACTCCACA GGCAATGGGC AGGTCAGGTC TCGCTGGTTC CTCTATGGAT 
GGACATCTGG ACATGTCTCA CTTACAGGTG CCTAAACATG TGGGATCGCC ACAAGATGAG 
CCCAATGACC TGGAGGAGCT GGAGCAGTTC GCTAAAGCCT TTAAACAGAG ACGCATTAAA 
CTAGGCTTTA CTCAGGGTGA TGTGGGTCTG GCCATGGGAA AGCTGTATGG AAATGACTTC 
AGTCAGACTA CCATCTCACG CTTTGAAGCT CTCAATCTAA GCTTCAAAAA CATGTGCAAG 
CTCAAGCCTT TACTGGAAAA GTGGCTAAGT GATGCAGAGA ATTCACCGTC TGACACCATG 
ACCAACACCA CTACTTTACC ACCCCTCATG GAGGGATATG GAAGGAAGAG AAAAAAGAGA 
ACAAGCATCG AAACGAACAT CAAGCTCACG CTTGAGAAAC GCTTTCTAGA TAACCCAAAA 
CCCAACTCTG AAGAGATTAC GCTGATCTCA GAGCAGCTGG CCATGGAGAA GGAGGTGGTG 
CGGGTTTGGT TCTGCAACCG GCGGCAGAAG GAGAAGAGGA TATACTGCCC AGTTTCCACT 
TCACCCATAA AACCTCACAA CTTCAACCCT CGTCTGCCTT CAACTTCCCG CTCCTTTAGT 
CCACTTACTT CTGGAGGTGT CTCATCAAGC TCCTCCCCTG GCAGCCCCAG CCGAGGCTCT 
TCCCCAGGCA CACTGTCCAC CACCTCCAGT CCGCTGACAG CACAGAGCGT CAACCAGACC 
TTTAACACTG CCGGATCGTG GTATCGCTGG AACACCGCCT CATACCATCA CTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa30675
Clone ID Related Accession (Same CDS sequence) XM_017356085.1 , XM_017356085.2 , NM_001045255.2
Accession Version XM_017356085.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1194bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-06-14
Organism Danio rerio(zebrafish)
Product POU domain, class 2, transcription factor 3 isoform X2
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007116.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_017356085.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGAGCACAG ACGCTGTTGA GCAGACAGAA TCTCAGCATG AACAAGCTGA CATTGAACAA 
AATGGCATCG ACTTCACCAG ACAAATTAAG ACCGAGAACC TGAACGATTC ACCACATTCT 
GGATCTTCAC ACAAGACATG CCACTTAACT CAGGGATCAC CGCTGCCTCC TGGCCAGCTG 
ACTGGGGAGA TGCCCTCCCT GCACCCTCTG CCGCAGCTCG TCCTGATGCC TGGATCTCAC 
CTGTCTTCTC CTTCATCATT CCTCCTCTCA CAGGCCCAGT CAGGACATCA AGCACTCCTG 
CCACCCAATC TGCTTTCCTT GCCATCCCAG ACTCAGACAG GACTTCTCCC GCACCAACCT 
GGTCTTGCAC TCACTCCACA GGCAATGGGC AGGTCAGGTC TCGCTGGTTC CTCTATGGAT 
GGACATCTGG ACATGTCTCA CTTACAGGTG CCTAAACATG TGGGATCGCC ACAAGATGAG 
CCCAATGACC TGGAGGAGCT GGAGCAGTTC GCTAAAGCCT TTAAACAGAG ACGCATTAAA 
CTAGGCTTTA CTCAGGGTGA TGTGGGTCTG GCCATGGGAA AGCTGTATGG AAATGACTTC 
AGTCAGACTA CCATCTCACG CTTTGAAGCT CTCAATCTAA GCTTCAAAAA CATGTGCAAG 
CTCAAGCCTT TACTGGAAAA GTGGCTAAGT GATGCAGAGA ATTCACCGTC TGACACCATG 
ACCAACACCA CTACTTTACC ACCCCTCATG GAGGGATATG GAAGGAAGAG AAAAAAGAGA 
ACAAGCATCG AAACGAACAT CAAGCTCACG CTTGAGAAAC GCTTTCTAGA TAACCCAAAA 
CCCAACTCTG AAGAGATTAC GCTGATCTCA GAGCAGCTGG CCATGGAGAA GGAGGTGGTG 
CGGGTTTGGT TCTGCAACCG GCGGCAGAAG GAGAAGAGGA TATACTGCCC AGTTTCCACT 
TCACCCATAA AACCTCACAA CTTCAACCCT CGTCTGCCTT CAACTTCCCG CTCCTTTAGT 
CCACTTACTT CTGGAGGTGT CTCATCAAGC TCCTCCCCTG GCAGCCCCAG CCGAGGCTCT 
TCCCCAGGCA CACTGTCCAC CACCTCCAGT CCGCTGACAG CACAGAGCGT CAACCAGACC 
TTTAACACTG CCGGATCGTG GTATCGCTGG AACACCGCCT CATACCATCA CTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_017211574.1
CDS226..1419
Translation

Target ORF information:

RefSeq Version XM_017356085.2
Organism Danio rerio(zebrafish)
Definition Danio rerio POU class 2 homeobox 3 (pou2f3), transcript variant X3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_017356085.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
ATGAGCACAG ACGCTGTTGA GCAGACAGAA TCTCAGCATG AACAAGCTGA CATTGAACAA 
AATGGCATCG ACTTCACCAG ACAAATTAAG ACCGAGAACC TGAACGATTC ACCACATTCT 
GGATCTTCAC ACAAGACATG CCACTTAACT CAGGGATCAC CGCTGCCTCC TGGCCAGCTG 
ACTGGGGAGA TGCCCTCCCT GCACCCTCTG CCGCAGCTCG TCCTGATGCC TGGATCTCAC 
CTGTCTTCTC CTTCATCATT CCTCCTCTCA CAGGCCCAGT CAGGACATCA AGCACTCCTG 
CCACCCAATC TGCTTTCCTT GCCATCCCAG ACTCAGACAG GACTTCTCCC GCACCAACCT 
GGTCTTGCAC TCACTCCACA GGCAATGGGC AGGTCAGGTC TCGCTGGTTC CTCTATGGAT 
GGACATCTGG ACATGTCTCA CTTACAGGTG CCTAAACATG TGGGATCGCC ACAAGATGAG 
CCCAATGACC TGGAGGAGCT GGAGCAGTTC GCTAAAGCCT TTAAACAGAG ACGCATTAAA 
CTAGGCTTTA CTCAGGGTGA TGTGGGTCTG GCCATGGGAA AGCTGTATGG AAATGACTTC 
AGTCAGACTA CCATCTCACG CTTTGAAGCT CTCAATCTAA GCTTCAAAAA CATGTGCAAG 
CTCAAGCCTT TACTGGAAAA GTGGCTAAGT GATGCAGAGA ATTCACCGTC TGACACCATG 
ACCAACACCA CTACTTTACC ACCCCTCATG GAGGGATATG GAAGGAAGAG AAAAAAGAGA 
ACAAGCATCG AAACGAACAT CAAGCTCACG CTTGAGAAAC GCTTTCTAGA TAACCCAAAA 
CCCAACTCTG AAGAGATTAC GCTGATCTCA GAGCAGCTGG CCATGGAGAA GGAGGTGGTG 
CGGGTTTGGT TCTGCAACCG GCGGCAGAAG GAGAAGAGGA TATACTGCCC AGTTTCCACT 
TCACCCATAA AACCTCACAA CTTCAACCCT CGTCTGCCTT CAACTTCCCG CTCCTTTAGT 
CCACTTACTT CTGGAGGTGT CTCATCAAGC TCCTCCCCTG GCAGCCCCAG CCGAGGCTCT 
TCCCCAGGCA CACTGTCCAC CACCTCCAGT CCGCTGACAG CACAGAGCGT CAACCAGACC 
TTTAACACTG CCGGATCGTG GTATCGCTGG AACACCGCCT CATACCATCA CTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J


book

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R