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LOC555499 cDNA ORF clone, Danio rerio(zebrafish)

Summary

Gene Symbol LOC555499
Entrez Gene ID 555499
Full Name BTB/POZ domain-containing protein 2
Synonyms btbd2
Gene Type protein-coding
Organism Danio rerio(zebrafish)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_005168444.3 XP_005168501.1 BTB/POZ domain-containing protein 2
XM_005168444.4 XP_005168501.1 BTB/POZ domain-containing protein 2

Pathways from BioSystems


Homologies


Rattus norvegicus (Norway rat) Btbd2 XP_006241099.1
Danio rerio (zebrafish) btbd2a NP_001038557.1
Danio rerio (zebrafish) LOC555499 XP_005168501.1
Pan troglodytes (chimpanzee) BTBD2 XP_001172950.2
Bos taurus (cattle) BTBD2 XP_003586345.2
Mus musculus (house mouse) Btbd2 NP_663336.2
Caenorhabditis elegans (roundworm) tag-30 NP_502244.1
Homo sapiens (human) BTBD2 NP_060267.2
LOC721419 XP_001117560.2
Xenopus tropicalis (tropical clawed frog) btbd2 XP_002937976.1

Gene Ontology

The following LOC555499 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC555499 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa07616 XM_005168444.4
Latest version!		 Danio rerio BTB/POZ domain-containing protein 2 (LOC555499), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $342.30
$489.00
View Old Accession Versions >>
ODa07616 XM_005168444.3 Danio rerio BTB domain containing 2 (btbd2), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $342.30
$489.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ODa07616
Clone ID Related Accession (Same CDS sequence) XM_005168444.3 , XM_005168444.4
Accession Version XM_005168444.3 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1695bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-23
Organism Danio rerio(Zebrafish)
Product BTB/POZ domain-containing protein 2
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007113.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005168444.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
ATGGCTACAG GAGACAATAG CGGTCGGGTT CCGTGTTTAA ATTTCTCGGT GCCCGGACCT 
TTGGGTAACA GTCAACCGAG CAACAGCCCT TTCGCATTGG CGGCGAGTCA CGGAGGATCG 
GTCGGGGGCG GTGGAGGCTC TCAGGGGGTA ACGAGACGCT CAAATCCTCA ACCGGGGCCT 
CAGGCCCTTG AAAGCCCCGG TGTCGCGTCG GGACTTCCGC CGAACTTGAT GAACGCTGTC 
CCGGCTGCCG CGGCGGTGGT GGGCCCGCTG GCTCCGGCCG CCTCGAACAT GACAGGGAGC 
CCGTCTAACG CAGCGATGAC ACCGGCGGCC GCCACACACT CAGCCCTGTC CGCTCCACCA 
GCCGCTGCCG CCGTGCTTGT GTACCGGGAG CCTGTTTATA ACTGGCAGGC GACGAAAAGC 
ACCGTGAAAG AGAGATTTGC GTTTCTGTTC AATAATGAAG TACTGAGTGA CGTTCACTTT 
CTAGTGGGTA AAGGAATGGG AGTCCAGCGG ATACCTGCGC ACAGGTTTGT TCTGGCGGTT 
GGCAGTGCAG TATTTGATGC CATGTTCAAT GGAGGCATGG CCACCACGTC CACAGAGATC 
GAGCTCCCGG ATGTAGAACC TGCTGCATTC CTTTCATTGC TTAAATTCCT GTACTCTGAT 
GAAGTTCATA TCGGACCCGA GACAGTGATG ACGACTCTCT ACACGGCTAA AAAATACGCT 
GTTCCGGCTC TAGAGGCACA CTGTGTGGAG TTTCTGAAGA AGAACCTACG AGCGGATAAT 
GCGTTCATGC TGCTTACACA AGCGAGGCTG TTTGATGAGC CGCAGTTGGC CAGTCTGTGT 
CTGGAGAACA TCGATAAAAA CACAGGAGAC GCTCTGGCTG CAGAAGGATT CACTGATATT 
GATCTGGATA CGCTGGTGGC AGTGTTGGAG AGAGATACTC TGGGTGTGCG AGAGGTTCAT 
CTGTTCGGAG CAGCGGTCCG CTGGGCAGAA GCTGAAGCTC ACCGGCAGCA GCTTCAGCCT 
ACGCCGGAGA ACAAGAGACG AGTGCTGGGA AAAGCCCTCA GCCTCATCCG CTTCCCTCTC 
ATGACCATTG AGGAGTTCGC TGCAGGTCCT GCTCAGTCAG CCATTCTCAC AGACAGGGAG 
GTCGTGAGTC TGTTCCTGCA CTTCACGGTG AACCCTAAGC CACGTGTGGA GTTTATCGAC 
AGGCCGCGCT GCTGTTTGCG GGGCAAAGAG TGCAGCATCA CACGCTTCGG GCAGGTGGAA 
AGTCGCTGGG GCTACAGCGG GACCAGTGAC CGGATCCGGT TCTCTGTCAG CCGCAGGATA 
TTTATTGTGG GCTTTGGGCT TTATGGATCC ATACACGGAC CTACAGACTA TCAGGTCAAC 
ATACAGATCA TTCACACTGA CAGTAACACA GTTCTGGGTC AGAACGACAC GGGTTTCAGC 
TGTGACGGGT CTGCAAACAC ATTCAGAGTC ATGTTTAAGG AGCCAGTGGA GGTTCTGCCC 
AACGTCAACT ACACCGCCTG TGCTACATTA AAGGGTCCAG ACTCGCACTA CGGCACTAAA 
GGGATGAGGA AAGTCACTCA CGAGTCTTCA GGCTCCGGCA CCAAAACCTG CTTCACTTTC 
TGCTACGCCG CCGGGAACAA CAACGGCACA TCAGTGGAGG ACGGACAGAT CCCAGAAGTC 
ATCTTTTACA CGTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005168501.1
CDS135..1829
Translation

Target ORF information:

RefSeq Version XM_005168444.3
Organism Danio rerio(Zebrafish)
Definition Danio rerio BTB domain containing 2 (btbd2), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005168444.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
ATGGCTACAG GAGACAATAG CGGTCGGGTT CCGTGTTTAA ATTTCTCGGT GCCCGGACCT 
TTGGGTAACA GTCAACCGAG CAACAGCCCT TTCGCATTGG CGGCGAGTCA CGGAGGATCG 
GTCGGGGGCG GTGGAGGCTC TCAGGGGGTA ACGAGACGCT CAAATCCTCA ACCGGGGCCT 
CAGGCCCTTG AAAGCCCCGG TGTCGCGTCG GGACTTCCGC CGAACTTGAT GAACGCTGTC 
CCGGCTGCCG CGGCGGTGGT GGGCCCGCTG GCTCCGGCCG CCTCGAACAT GACAGGGAGC 
CCGTCTAACG CAGCGATGAC ACCGGCGGCC GCCACACACT CAGCCCTGTC CGCTCCACCA 
GCCGCTGCCG CCGTGCTTGT GTACCGGGAG CCTGTTTATA ACTGGCAGGC GACGAAAAGC 
ACCGTGAAAG AGAGATTTGC GTTTCTGTTC AATAATGAAG TACTGAGTGA CGTTCACTTT 
CTAGTGGGTA AAGGAATGGG AGTCCAGCGG ATACCTGCGC ACAGGTTTGT TCTGGCGGTT 
GGCAGTGCAG TATTTGATGC CATGTTCAAT GGAGGCATGG CCACCACGTC CACAGAGATC 
GAGCTCCCGG ATGTAGAACC TGCTGCATTC CTTTCATTGC TTAAATTCCT GTACTCTGAT 
GAAGTTCATA TCGGACCCGA GACAGTGATG ACGACTCTCT ACACGGCTAA AAAATACGCT 
GTTCCGGCTC TAGAGGCACA CTGTGTGGAG TTTCTGAAGA AGAACCTACG AGCGGATAAT 
GCGTTCATGC TGCTTACACA AGCGAGGCTG TTTGATGAGC CGCAGTTGGC CAGTCTGTGT 
CTGGAGAACA TCGATAAAAA CACAGGAGAC GCTCTGGCTG CAGAAGGATT CACTGATATT 
GATCTGGATA CGCTGGTGGC AGTGTTGGAG AGAGATACTC TGGGTGTGCG AGAGGTTCAT 
CTGTTCGGAG CAGCGGTCCG CTGGGCAGAA GCTGAAGCTC ACCGGCAGCA GCTTCAGCCT 
ACGCCGGAGA ACAAGAGACG AGTGCTGGGA AAAGCCCTCA GCCTCATCCG CTTCCCTCTC 
ATGACCATTG AGGAGTTCGC TGCAGGTCCT GCTCAGTCAG CCATTCTCAC AGACAGGGAG 
GTCGTGAGTC TGTTCCTGCA CTTCACGGTG AACCCTAAGC CACGTGTGGA GTTTATCGAC 
AGGCCGCGCT GCTGTTTGCG GGGCAAAGAG TGCAGCATCA CACGCTTCGG GCAGGTGGAA 
AGTCGCTGGG GCTACAGCGG GACCAGTGAC CGGATCCGGT TCTCTGTCAG CCGCAGGATA 
TTTATTGTGG GCTTTGGGCT TTATGGATCC ATACACGGAC CTACAGACTA TCAGGTCAAC 
ATACAGATCA TTCACACTGA CAGTAACACA GTTCTGGGTC AGAACGACAC GGGTTTCAGC 
TGTGACGGGT CTGCAAACAC ATTCAGAGTC ATGTTTAAGG AGCCAGTGGA GGTTCTGCCC 
AACGTCAACT ACACCGCCTG TGCTACATTA AAGGGTCCAG ACTCGCACTA CGGCACTAAA 
GGGATGAGGA AAGTCACTCA CGAGTCTTCA GGCTCCGGCA CCAAAACCTG CTTCACTTTC 
TGCTACGCCG CCGGGAACAA CAACGGCACA TCAGTGGAGG ACGGACAGAT CCCAGAAGTC 
ATCTTTTACA CGTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa07616
Clone ID Related Accession (Same CDS sequence) XM_005168444.3 , XM_005168444.4
Accession Version XM_005168444.4 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1695bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-06-14
Organism Danio rerio(zebrafish)
Product BTB/POZ domain-containing protein 2
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007113.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005168444.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
ATGGCTACAG GAGACAATAG CGGTCGGGTT CCGTGTTTAA ATTTCTCGGT GCCCGGACCT 
TTGGGTAACA GTCAACCGAG CAACAGCCCT TTCGCATTGG CGGCGAGTCA CGGAGGATCG 
GTCGGGGGCG GTGGAGGCTC TCAGGGGGTA ACGAGACGCT CAAATCCTCA ACCGGGGCCT 
CAGGCCCTTG AAAGCCCCGG TGTCGCGTCG GGACTTCCGC CGAACTTGAT GAACGCTGTC 
CCGGCTGCCG CGGCGGTGGT GGGCCCGCTG GCTCCGGCCG CCTCGAACAT GACAGGGAGC 
CCGTCTAACG CAGCGATGAC ACCGGCGGCC GCCACACACT CAGCCCTGTC CGCTCCACCA 
GCCGCTGCCG CCGTGCTTGT GTACCGGGAG CCTGTTTATA ACTGGCAGGC GACGAAAAGC 
ACCGTGAAAG AGAGATTTGC GTTTCTGTTC AATAATGAAG TACTGAGTGA CGTTCACTTT 
CTAGTGGGTA AAGGAATGGG AGTCCAGCGG ATACCTGCGC ACAGGTTTGT TCTGGCGGTT 
GGCAGTGCAG TATTTGATGC CATGTTCAAT GGAGGCATGG CCACCACGTC CACAGAGATC 
GAGCTCCCGG ATGTAGAACC TGCTGCATTC CTTTCATTGC TTAAATTCCT GTACTCTGAT 
GAAGTTCATA TCGGACCCGA GACAGTGATG ACGACTCTCT ACACGGCTAA AAAATACGCT 
GTTCCGGCTC TAGAGGCACA CTGTGTGGAG TTTCTGAAGA AGAACCTACG AGCGGATAAT 
GCGTTCATGC TGCTTACACA AGCGAGGCTG TTTGATGAGC CGCAGTTGGC CAGTCTGTGT 
CTGGAGAACA TCGATAAAAA CACAGGAGAC GCTCTGGCTG CAGAAGGATT CACTGATATT 
GATCTGGATA CGCTGGTGGC AGTGTTGGAG AGAGATACTC TGGGTGTGCG AGAGGTTCAT 
CTGTTCGGAG CAGCGGTCCG CTGGGCAGAA GCTGAAGCTC ACCGGCAGCA GCTTCAGCCT 
ACGCCGGAGA ACAAGAGACG AGTGCTGGGA AAAGCCCTCA GCCTCATCCG CTTCCCTCTC 
ATGACCATTG AGGAGTTCGC TGCAGGTCCT GCTCAGTCAG CCATTCTCAC AGACAGGGAG 
GTCGTGAGTC TGTTCCTGCA CTTCACGGTG AACCCTAAGC CACGTGTGGA GTTTATCGAC 
AGGCCGCGCT GCTGTTTGCG GGGCAAAGAG TGCAGCATCA CACGCTTCGG GCAGGTGGAA 
AGTCGCTGGG GCTACAGCGG GACCAGTGAC CGGATCCGGT TCTCTGTCAG CCGCAGGATA 
TTTATTGTGG GCTTTGGGCT TTATGGATCC ATACACGGAC CTACAGACTA TCAGGTCAAC 
ATACAGATCA TTCACACTGA CAGTAACACA GTTCTGGGTC AGAACGACAC GGGTTTCAGC 
TGTGACGGGT CTGCAAACAC ATTCAGAGTC ATGTTTAAGG AGCCAGTGGA GGTTCTGCCC 
AACGTCAACT ACACCGCCTG TGCTACATTA AAGGGTCCAG ACTCGCACTA CGGCACTAAA 
GGGATGAGGA AAGTCACTCA CGAGTCTTCA GGCTCCGGCA CCAAAACCTG CTTCACTTTC 
TGCTACGCCG CCGGGAACAA CAACGGCACA TCAGTGGAGG ACGGACAGAT CCCAGAAGTC 
ATCTTTTACA CGTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005168501.1
CDS67..1761
Translation

Target ORF information:

RefSeq Version XM_005168444.4
Organism Danio rerio(zebrafish)
Definition Danio rerio BTB/POZ domain-containing protein 2 (LOC555499), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_005168444.4

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
ATGGCTACAG GAGACAATAG CGGTCGGGTT CCGTGTTTAA ATTTCTCGGT GCCCGGACCT 
TTGGGTAACA GTCAACCGAG CAACAGCCCT TTCGCATTGG CGGCGAGTCA CGGAGGATCG 
GTCGGGGGCG GTGGAGGCTC TCAGGGGGTA ACGAGACGCT CAAATCCTCA ACCGGGGCCT 
CAGGCCCTTG AAAGCCCCGG TGTCGCGTCG GGACTTCCGC CGAACTTGAT GAACGCTGTC 
CCGGCTGCCG CGGCGGTGGT GGGCCCGCTG GCTCCGGCCG CCTCGAACAT GACAGGGAGC 
CCGTCTAACG CAGCGATGAC ACCGGCGGCC GCCACACACT CAGCCCTGTC CGCTCCACCA 
GCCGCTGCCG CCGTGCTTGT GTACCGGGAG CCTGTTTATA ACTGGCAGGC GACGAAAAGC 
ACCGTGAAAG AGAGATTTGC GTTTCTGTTC AATAATGAAG TACTGAGTGA CGTTCACTTT 
CTAGTGGGTA AAGGAATGGG AGTCCAGCGG ATACCTGCGC ACAGGTTTGT TCTGGCGGTT 
GGCAGTGCAG TATTTGATGC CATGTTCAAT GGAGGCATGG CCACCACGTC CACAGAGATC 
GAGCTCCCGG ATGTAGAACC TGCTGCATTC CTTTCATTGC TTAAATTCCT GTACTCTGAT 
GAAGTTCATA TCGGACCCGA GACAGTGATG ACGACTCTCT ACACGGCTAA AAAATACGCT 
GTTCCGGCTC TAGAGGCACA CTGTGTGGAG TTTCTGAAGA AGAACCTACG AGCGGATAAT 
GCGTTCATGC TGCTTACACA AGCGAGGCTG TTTGATGAGC CGCAGTTGGC CAGTCTGTGT 
CTGGAGAACA TCGATAAAAA CACAGGAGAC GCTCTGGCTG CAGAAGGATT CACTGATATT 
GATCTGGATA CGCTGGTGGC AGTGTTGGAG AGAGATACTC TGGGTGTGCG AGAGGTTCAT 
CTGTTCGGAG CAGCGGTCCG CTGGGCAGAA GCTGAAGCTC ACCGGCAGCA GCTTCAGCCT 
ACGCCGGAGA ACAAGAGACG AGTGCTGGGA AAAGCCCTCA GCCTCATCCG CTTCCCTCTC 
ATGACCATTG AGGAGTTCGC TGCAGGTCCT GCTCAGTCAG CCATTCTCAC AGACAGGGAG 
GTCGTGAGTC TGTTCCTGCA CTTCACGGTG AACCCTAAGC CACGTGTGGA GTTTATCGAC 
AGGCCGCGCT GCTGTTTGCG GGGCAAAGAG TGCAGCATCA CACGCTTCGG GCAGGTGGAA 
AGTCGCTGGG GCTACAGCGG GACCAGTGAC CGGATCCGGT TCTCTGTCAG CCGCAGGATA 
TTTATTGTGG GCTTTGGGCT TTATGGATCC ATACACGGAC CTACAGACTA TCAGGTCAAC 
ATACAGATCA TTCACACTGA CAGTAACACA GTTCTGGGTC AGAACGACAC GGGTTTCAGC 
TGTGACGGGT CTGCAAACAC ATTCAGAGTC ATGTTTAAGG AGCCAGTGGA GGTTCTGCCC 
AACGTCAACT ACACCGCCTG TGCTACATTA AAGGGTCCAG ACTCGCACTA CGGCACTAAA 
GGGATGAGGA AAGTCACTCA CGAGTCTTCA GGCTCCGGCA CCAAAACCTG CTTCACTTTC 
TGCTACGCCG CCGGGAACAA CAACGGCACA TCAGTGGAGG ACGGACAGAT CCCAGAAGTC 
ATCTTTTACA CGTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed