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ZGC:162339 cDNA ORF clone, Danio rerio(Zebrafish)

Gene Symbol ZGC:162339
Entrez Gene ID 556473
Full Name zgc:162339
General protein information
Preferred Names

zgc:162339

Names

uncharacterized protein C11orf57 homolog

Gene Type protein-coding
Organism Danio rerio(Zebrafish)

mRNA and Protein(s)

mRNA Protein Name
XM_005157521.3 XP_005157578.1 uncharacterized protein C11orf57 homolog isoform X1
NM_001160409.1 NP_001153881.1 uncharacterized protein C11orf57 homolog



Related articles in PubMed

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD, Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T, Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL, Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P, Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH, Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW, Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW, Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U, Smailus DE, Schnerch A, Schein JE, Jones SJ, Marra MA,
Proceedings of the National Academy of Sciences of the United States of America99(26)16899-903(2002 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following ZGC:162339 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ZGC:162339 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID RefSeq Accession Definition **Vector *Turnaround time Price (USD) Select
ODa20386 NM_001160409.1
Latest version!
Danio rerio zgc:162339 (zgc:162339), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $174.30
$249.00
ODa20386 XM_005157521.3
Latest version!
Danio rerio zgc:162339 (zgc:162339), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $174.30
$249.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.


CloneID ODa20386
Clone ID Related Accession (Same CDS sequence) XM_005157521.3 , NM_001160409.1
Accession Version NM_001160409.1 Latest version! Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 768bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 2016-06-26
Organism Danio rerio(Zebrafish)
Product uncharacterized protein C11orf57 homolog
Comment PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from BC139569.1. On or before May 25, 2009 this sequence version replaced XM_679289.3, XM_001923739.1. ##Evidence-Data-START## Transcript exon combination :: BC139569.1, EH546758.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

1
61
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181
241
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361
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481
541
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721
ATGTCAAAGG TGTCTTTAGG TAAACTTCTA CTCCGAAATG TCATCAGACA CACAGATGCA 
CATAACAAGA TTCAAGAGGA GTCTGAGATG TGGAAGTTGA GGGATCTTGA ACGACATACC
TCGTCCACTC ATTTCCCAAA GCACAGGGGC AGCATGCATT GTGACCGCTA TTTGGACGAC
TCAGAAGGGT CAACGAGAGA CCGGCTGGGT GAGCGGAGAG ACGATGTATC TGAGAGAGAT
GAGAGGGAGG CACGATACTG GACACGCAAA CTGTATGAGT TTGAAGCCAA TGATCCTGAC
AGGTGGGGCC ACAGTGGCTT TAAGGAGCTT TATCCAGAAG AATTTCATAC AGACAGAGAG
AAAGCTTGCA GTGATAGTAA ACATAGAAAG AAAAAACACA AGAACAAACT GAACGCTGAC
TTGGAGAAAT CTTCCAAGAA GTCATCTAAG AAGAAGAAAA GGAAGAAAGA GAAGAAGAAA
AGGAAGACGG CGGCGCCTGG CTCAGAGACC TGCAGTGATG CAGAGGAGAC CGTGAGGAGG
AAACAGAGGA GAAAGGGGAG TAAAAGCAAA CATAAGAAAA AAGAGCACAA AAACAAAGAC
AGAACTGAGG ACAGCAGCAC AGAGGACAGC CGTTCAGACA CAAAGCCAAA AACCCACAGG
AAAAGAGAGT GTCCTGAAAC AGACACACTG ACTGAGCCTC AAAGGAAAAA GAGGAAAAAC
TGGAAAGTAG CGAACGAGGA GAGATCAGAG GAGAGCTCTG ATGCTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001153881.1
CDS93..860
Misc Feature(1)75..77
Misc Feature(2)330..>455
Translation

Target ORF information:

RefSeq Version NM_001160409.1
Organism Danio rerio(Zebrafish)
Definition Danio rerio zgc:162339 (zgc:162339), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
NM_001160409.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGTCAAAGG TGTCTTTAGG TAAACTTCTA CTCCGAAATG TCATCAGACA CACAGATGCA 
CATAACAAGA TTCAAGAGGA GTCTGAGATG TGGAAGTTGA GGGATCTTGA ACGACATACC
TCGTCCACTC ATTTCCCAAA GCACAGGGGC AGCATGCATT GTGACCGCTA TTTGGACGAC
TCAGAAGGGT CAACGAGAGA CCGGCTGGGT GAGCGGAGAG ACGATGTATC TGAGAGAGAT
GAGAGGGAGG CACGATACTG GACACGCAAA CTGTATGAGT TTGAAGCCAA TGATCCTGAC
AGGTGGGGCC ACAGTGGCTT TAAGGAGCTT TATCCAGAAG AATTTCATAC AGACAGAGAG
AAAGCTTGCA GTGATAGTAA ACATAGAAAG AAAAAACACA AGAACAAACT GAACGCTGAC
TTGGAGAAAT CTTCCAAGAA GTCATCTAAG AAGAAGAAAA GGAAGAAAGA GAAGAAGAAA
AGGAAGACGG CGGCGCCTGG CTCAGAGACC TGCAGTGATG CAGAGGAGAC CGTGAGGAGG
AAACAGAGGA GAAAGGGGAG TAAAAGCAAA CATAAGAAAA AAGAGCACAA AAACAAAGAC
AGAACTGAGG ACAGCAGCAC AGAGGACAGC CGTTCAGACA CAAAGCCAAA AACCCACAGG
AAAAGAGAGT GTCCTGAAAC AGACACACTG ACTGAGCCTC AAAGGAAAAA GAGGAAAAAC
TGGAAAGTAG CGAACGAGGA GAGATCAGAG GAGAGCTCTG ATGCTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ODa20386
Clone ID Related Accession (Same CDS sequence) XM_005157521.3 , NM_001160409.1
Accession Version XM_005157521.3 Latest version! Documents for ORF clone product in dufault vector
Sequence Information ORF Nucleotide Sequence (Length: 768bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ® Seamless cloning technology
Insert Structure linear
Update Date 2016-06-24
Organism Danio rerio(Zebrafish)
Product uncharacterized protein C11orf57 homolog isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007126.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005157521.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGTCAAAGG TGTCTTTAGG TAAACTTCTA CTCCGAAATG TCATCAGACA CACAGATGCA 
CATAACAAGA TTCAAGAGGA GTCTGAGATG TGGAAGTTGA GGGATCTTGA ACGACATACC
TCGTCCACTC ATTTCCCAAA GCACAGGGGC AGCATGCATT GTGACCGCTA TTTGGACGAC
TCAGAAGGGT CAACGAGAGA CCGGCTGGGT GAGCGGAGAG ACGATGTATC TGAGAGAGAT
GAGAGGGAGG CACGATACTG GACACGCAAA CTGTATGAGT TTGAAGCCAA TGATCCTGAC
AGGTGGGGCC ACAGTGGCTT TAAGGAGCTT TATCCAGAAG AATTTCATAC AGACAGAGAG
AAAGCTTGCA GTGATAGTAA ACATAGAAAG AAAAAACACA AGAACAAACT GAACGCTGAC
TTGGAGAAAT CTTCCAAGAA GTCATCTAAG AAGAAGAAAA GGAAGAAAGA GAAGAAGAAA
AGGAAGACGG CGGCGCCTGG CTCAGAGACC TGCAGTGATG CAGAGGAGAC CGTGAGGAGG
AAACAGAGGA GAAAGGGGAG TAAAAGCAAA CATAAGAAAA AAGAGCACAA AAACAAAGAC
AGAACTGAGG ACAGCAGCAC AGAGGACAGC CGTTCAGACA CAAAGCCAAA AACCCACAGG
AAAAGAGAGT GTCCTGAAAC AGACACACTG ACTGAGCCTC AAAGGAAAAA GAGGAAAAAC
TGGAAAGTAG CGAACGAGGA GAGATCAGAG GAGAGCTCTG ATGCTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_005157578.1
CDS213..980
Misc Feature(1)450..>575
Translation

Target ORF information:

RefSeq Version XM_005157521.3
Organism Danio rerio(Zebrafish)
Definition Danio rerio zgc:162339 (zgc:162339), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
XM_005157521.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGTCAAAGG TGTCTTTAGG TAAACTTCTA CTCCGAAATG TCATCAGACA CACAGATGCA 
CATAACAAGA TTCAAGAGGA GTCTGAGATG TGGAAGTTGA GGGATCTTGA ACGACATACC
TCGTCCACTC ATTTCCCAAA GCACAGGGGC AGCATGCATT GTGACCGCTA TTTGGACGAC
TCAGAAGGGT CAACGAGAGA CCGGCTGGGT GAGCGGAGAG ACGATGTATC TGAGAGAGAT
GAGAGGGAGG CACGATACTG GACACGCAAA CTGTATGAGT TTGAAGCCAA TGATCCTGAC
AGGTGGGGCC ACAGTGGCTT TAAGGAGCTT TATCCAGAAG AATTTCATAC AGACAGAGAG
AAAGCTTGCA GTGATAGTAA ACATAGAAAG AAAAAACACA AGAACAAACT GAACGCTGAC
TTGGAGAAAT CTTCCAAGAA GTCATCTAAG AAGAAGAAAA GGAAGAAAGA GAAGAAGAAA
AGGAAGACGG CGGCGCCTGG CTCAGAGACC TGCAGTGATG CAGAGGAGAC CGTGAGGAGG
AAACAGAGGA GAAAGGGGAG TAAAAGCAAA CATAAGAAAA AAGAGCACAA AAACAAAGAC
AGAACTGAGG ACAGCAGCAC AGAGGACAGC CGTTCAGACA CAAAGCCAAA AACCCACAGG
AAAAGAGAGT GTCCTGAAAC AGACACACTG ACTGAGCCTC AAAGGAAAAA GAGGAAAAAC
TGGAAAGTAG CGAACGAGGA GAGATCAGAG GAGAGCTCTG ATGCTTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

book

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
Proceedings of the National Academy of Sciences of the United States of America99(26)16899-903(2002 Dec)
Strausberg RL,Feingold EA,Grouse LH,Derge JG,Klausner RD,Collins FS,Wagner L,Shenmen CM,Schuler GD,Altschul SF,Zeeberg B,Buetow KH,Schaefer CF,Bhat NK,Hopkins RF,Jordan H,Moore T,Max SI,Wang J,Hsieh F,Diatchenko L,Marusina K,Farmer AA,Rubin GM,Hong L,Stapleton M,Soares MB,Bonaldo MF,Casavant TL,Scheetz TE,Brownstein MJ,Usdin TB,Toshiyuki S,Carninci P,Prange C,Raha SS,Loquellano NA,Peters GJ,Abramson RD,Mullahy SJ,Bosak SA,McEwan PJ,McKernan KJ,Malek JA,Gunaratne PH,Richards S,Worley KC,Hale S,Garcia AM,Gay LJ,Hulyk SW,Villalon DK,Muzny DM,Sodergren EJ,Lu X,Gibbs RA,Fahey J,Helton E,Ketteman M,Madan A,Rodrigues S,Sanchez A,Whiting M,Madan A,Young AC,Shevchenko Y,Bouffard GG,Blakesley RW,Touchman JW,Green ED,Dickson MC,Rodriguez AC,Grimwood J,Schmutz J,Myers RM,Butterfield YS,Krzywinski MI,Skalska U,Smailus DE,Schnerch A,Schein JE,Jones SJ,Marra MA,


 
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