The following rfx7 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the rfx7 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
ODa13236 |
Clone ID Related Accession (Same CDS sequence) |
XM_683773.8
, XM_683773.9
|
Accession Version |
XM_683773.8 |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 4530bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-06-23 |
Organism |
Danio rerio(Zebrafish) |
Product |
DNA-binding protein RFX7 |
Comment |
MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007118.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 24, 2016 this sequence version replaced XM_683773.7.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Danio rerio Annotation Release 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821 2881 2941 3001 3061 3121 3181 3241 3301 3361 3421 3481 3541 3601 3661 3721 3781 3841 3901 3961 4021 4081 4141 4201 4261 4321 4381 4441 4501
| ATGGCAGATG ACCAGCAGCA GTCGGGACCC GGAGCTGGAC CTTTACCGTC CGCGGTTCAG GGATTGCAAG GGCCCGAGGC GAGTGCTCTG CAGCTGAAGA TAAAGAACTC TATCTGCAAA ACTGTACAAT CGAAGGTGGA TTGCATTTTG CAAGATGTGG AGAAGCTTAC GGACATTGAA AAACTCTACC TCTATCTCAA GTTGCCTTCT GGACCCAGCA GTGGCAATGA GAAAAATGAG CAGAGCTCCA TGACATCAAG TCGTACCCAG CAGATGCACG CATTTAGCTG GATTCGTAAC CATCTTGAGG AGCATCCGGA AACATCGCTG CCTAAACAGG AAGTCTACGA TGAGTACAAG AGTTACTGTG ATAGTTTGGG GTATCACGCT CTCAGTGCTG CGGACTTTGG AAAGATCATG AAGAACGTCT TTCCCAACAT GAAGGCACGT CGACTTGGCA TGCGAGGCAA ATCCAAATAT TGCTATAGTG GACTTAGGAA GAAGACCTTT GTACAGATGC CATCTCTTCC CAACTTAGAT CTTCACAAAT CGGGTGATGG GTGTGAAGTG TTTGAGTCTA CTGGTCAACT ATCCAGTGCT GAAGATGAGG TGCGCATGGC TGCATGTGGG TTGGTGTGCG AGTGGGCACA GAAGGTGCTG AGTCGGCAGT TTGACAGCGT TGAAGATCTG GCTCGGTTTC TTTTAAACAG CCACTACATA GGAACCAAGT CTGTGGCTGC TCTTACTGTG ATGACCGGTT CCCCCTCAGG AGCAAAGATG TCAATTCAGT CATCTGCATT TGCTCCCACA ACCGATTCAC ACTCATTCCA GCCTCAGGTT AAAACCCTGG TTTCACCCTC CATAGATGCC AAACAGCAGC TACAACGGAA AATACAGAAG AAACAGCAAG AACAGAAACT GCATTCTCCA CTCCCTGTAG AGGCTCAGGC CAGGAGGGCA GATGGGGGCA TAACTCCTGT AGCAGGCACA GGCATACCCT GTGGAAGTCC TGCTCTTCTG TCGCCACAAC CTATTGGCAT TGTGGTTGCA GCTGTTTCCA GCCCAATCAC GGTTCAGAGA AGTAGGCAAT TAATGTCTCC TAGCCCTGTA CCCATGGCAT CTGCAGACAG CAAAGTTCTT CCTGTAAACT TTCAAGTGGT TACCCAATCT GTTCAACCTG TTAAACAGTC CCCCAAGGCA CCTCATAATA TCTCAGCTAG TCCAGTAAGT GACCGATCAG CTCGTCACCG GTATGCTCAA ATTCTGCCCA AGCCATCTGC CTCAAGTGGC ATAACCCTAC GTTCACCAAC CTTACTCTTC ACCAATAGCC CCATAAAGAC TGTAATGTCT ACTCCACATG TCAGTTCAGT CAATGTAGTC AAGATGACGA CTATATCTCT GGGCTCTAAT GGCAGTGGGA CCAGCACGCC AGCAGATGCT CTTACCAGCA ACAAAGCCAG ACCTGCATCT GCTGGAGTTT CTAGTCTCAG CGACGATCCA CAGCCAGTTA CACGTGTCCG CAGTGGTTCT ATAGCTGCAA TGCCATCTGC TTTGGCTCGG TTAGGGCGCT CAACAACCAT AACACCTATC AGCGATACTA AAATAAACAC AGAAGCCATA ACTGGAAGTG GGCAAGAGCA GGGTGGTATT AGTAGGCTGG CAGCTGCTGC AGATGTTGGT GGTAGTGGTG TACCAAGGTC AGTAATGTTC AAACCCAGAG CAGCTAGCGT ACCCAGTCCT CATGACAAGG CTTCTCCTGG ATTGGGCACA GGGACCAAAT GCAATGGAAG GACTCTCCTT AGAGTCAATA CTATGGCTGC TGGCAGCAAT AATATATCCA ACACTAATGC AAACACTTTG TACCAGATCC CAGGCAGCGC TCAGTCAGTC ACTGATAAAG TAATGACATC ACCCAAAGAT GCAGTGTTGG CATCCAAGAG CCCTCACAAA AGACCTGGCT TGTGCACTGA TTTGAGCCCA ACACCTGTTA AAAAAGCCCA CATCTCAATA TTACCAGACA CTGGTTCAAA TGGACAAAAG TCAGATATAA TGGTGAAGCA AATTCCAAGA TCATGTACTC CAGTCAGGCC AGAAAGTGCA CCCCTCACGG CCATGGCCAA AGTTACCGCA GGTCCGGTAA GAAATTCTGG CTTTCAGACA GTTCACAGGC CACAAAGGAT CTCCCAAACC AATGAGATGC TTTGTGGACT AGAAGGAGCT TCATCAGGAT TGGACTATAG AGTTCCTGTC ACCTCTACTT TAAGTCAGGA TACTTCAATG GAGAATACAA TATTTCAGTC TGTTTGCAGA CCTCGGAGCA TCTCCCAAGG GAGATGGGAA GGATCTTCTA CAACCGTTGA AGGCAGAGTT GTGGTCACCC GAACTGTTAG CGCTCCAGGT CAAGCTTTGC TACAGCAAGC TGCAAAAATC TCACAAGATT TGCTTGTAGA CCAGACCGAT CCTTCTGGAG TTTGTGAAAT GAAAGGTGTC TTTTGGGAGA GTGAGCTGCA AGATGGCACT CAACAACATC AAGATGTTTA TGGTGCACAA ATGGTGCCTG AGCCAAAGAA AATGCCTACC CCAGTGATGG ACCCCCTTCC TGCAATTACT CAAGCTTCTC CTTCCAACCA AGAGGCTCAG ATGAGTGACT ATGGCACCCA GACCAACATC GGCTACTTCA CATTTAATGA TGATGACATG ACGCAGGATA GCATTGTGGA GGAACTTGTA CAAATGGAGG AGCAGATGAA AATTAATAAT AGCATACAAA ATTTCAGCAA CTGTGTGGAT ATTTCGATGC AAGGCCAGCA ACAATCAATG CAGACAACCA TGATGTCTAC CCTACAGACC AACACCTTGT ACTATAGTTC TGCTCATAGC AGGGGTACCC CAATCCAAAC ACCTACACCA ACACCTACTC CAACTTCTGA GATGATGGGA AGTGGCCAGG GATTGATGCA CGAAAGCCCT TGTTCACGCC TAGTTCCCAC CACTCCAGTC GACAGTGCTC TTGGAAGTAG TCGACAAACA CCTATTGGCA CACCACACTC TAGCTGCAGC AGTAGTGTCC CACCCAGCCC TGTGGAATGC AGGAACCCTT TTGCATTTAC TCCGATTAAC TCAAGCATCA CTGGATACCA TGATGGAAGT ACTGTCTCTT CAAGTCCTGT AAAGCCCATG CAAAGACCAA TGGCCACACA TCCAGGGAAG ACTAAACTGG AGTGGATGAA TAGTGGATAC AATAACAATG GTGGGAACTC TAACAATGGC ATTAGCATTC TGCCCAGCTA CCAAGACTTG GTAGATGACC ACTTTCGAAA GCCTCATGCT TTCGCCATCC CAGGCCAGAC CTGTCAGTCA CAGACCAGAC ATCATGACAC GCATATCAGC CGCTTGACAC CCATTTCACC TGTCCAACAG CAAGTGGCAA GTATGGCTAG CCTCAACAAG AAAGAGGGTT TTGCAGTTCC AGCACCTCTT GATAACAAGA CCAGCACTTC CTCTGGAACA TTTCGTTGTC GAAGCGTTAG CCCGGCAGTC AGACAGCGCA ACCTGAGTGG GACCCAAGGT CCAAATGTTC CTGACACCAT GGTCTCTCCA TTCAACTCAC CTGTAACACC TGAAGTGCTA AGCATATTTT CTAACAGTGA CCCTGACGCA AGCATCAGCA GCATGGCACA GAGGAGTCAG TCCGTTCCAG TTACTGTGAT GATGCAGTCT GAGGTGCTGC CCATGCAAGC AGGCCAGCAG ATTAATACCA AAAACATCAC CAATGTCCTC ATCAGCAAAA TGGATGGTGA TGGAGATGAC TCAGTACGTG GCCTCGGAAT CAACAACATG CCATCCAACT ATACTGCCCG CATGAATCTC ACCCAGATTC TGGAGACCAC CACAGTGCCC AGCCTCCCTG GTAGTGCCAG CCACCAAGCT CTGATCTCAC CTTGTTCATC AGCCTTTGAG TCCCAGAAGC CTGGTTACCT CATGAAAAAT GCCAGGGAGG AGCCGATGAT CTTCTCTGTT GGTGAAAGCC AAGCACAATC AGCCTCAGTG GAGCACCAGC CACCACCACC ACAACAACAG CAGCAGCAGC ACTTGGGTAG ACGGCAGCTC CTTGGGCAGG AACAGCAAAG TCAGGCCATT CTGTTGCCTT TACAGCAAAA CCTCCAACAA CATCAGCACC AGCAACCCTT GGATCTAGAT CGAACTGTTA AAGATCTTTT ACATGAGGAA AGCTTGAATG CTGGCTCACA GCTTGTGGGG CAAGGATCAG AGCTCAGTGC TGGAGGTTCA GAGTTTCCTA ACAATATGCG ACTGACTTCT GAACTGACAG GTAGCATAAA TGATTTAAAT ACTTTGGACA CCAACCTTCT TTTTGACCCC AGTCAACAGC AAGGACAATA TGAAGACTCG ACACTGGAAG AACTGAAGAA TGACCCACTT TTTCAACAGA TTTGCAGCGA GACTGTGAAT TCTGCTGGCT TTGACTGGTT GGAGAGCAAA GACCAGGCCA CAGTGGAAAT GCTGGGTTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_688865.4 |
CDS | 942..5471 |
Translation | |
Target ORF information:
RefSeq Version | XM_683773.8 |
Organism | Danio rerio(Zebrafish) |
Definition | Danio rerio regulatory factor X, 7 (rfx7), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_683773.8 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821 2881 2941 3001 3061 3121 3181 3241 3301 3361 3421 3481 3541 3601 3661 3721 3781 3841 3901 3961 4021 4081 4141 4201 4261 4321 4381 4441 4501
| ATGGCAGATG ACCAGCAGCA GTCGGGACCC GGAGCTGGAC CTTTACCGTC CGCGGTTCAG GGATTGCAAG GGCCCGAGGC GAGTGCTCTG CAGCTGAAGA TAAAGAACTC TATCTGCAAA ACTGTACAAT CGAAGGTGGA TTGCATTTTG CAAGATGTGG AGAAGCTTAC GGACATTGAA AAACTCTACC TCTATCTCAA GTTGCCTTCT GGACCCAGCA GTGGCAATGA GAAAAATGAG CAGAGCTCCA TGACATCAAG TCGTACCCAG CAGATGCACG CATTTAGCTG GATTCGTAAC CATCTTGAGG AGCATCCGGA AACATCGCTG CCTAAACAGG AAGTCTACGA TGAGTACAAG AGTTACTGTG ATAGTTTGGG GTATCACGCT CTCAGTGCTG CGGACTTTGG AAAGATCATG AAGAACGTCT TTCCCAACAT GAAGGCACGT CGACTTGGCA TGCGAGGCAA ATCCAAATAT TGCTATAGTG GACTTAGGAA GAAGACCTTT GTACAGATGC CATCTCTTCC CAACTTAGAT CTTCACAAAT CGGGTGATGG GTGTGAAGTG TTTGAGTCTA CTGGTCAACT ATCCAGTGCT GAAGATGAGG TGCGCATGGC TGCATGTGGG TTGGTGTGCG AGTGGGCACA GAAGGTGCTG AGTCGGCAGT TTGACAGCGT TGAAGATCTG GCTCGGTTTC TTTTAAACAG CCACTACATA GGAACCAAGT CTGTGGCTGC TCTTACTGTG ATGACCGGTT CCCCCTCAGG AGCAAAGATG TCAATTCAGT CATCTGCATT TGCTCCCACA ACCGATTCAC ACTCATTCCA GCCTCAGGTT AAAACCCTGG TTTCACCCTC CATAGATGCC AAACAGCAGC TACAACGGAA AATACAGAAG AAACAGCAAG AACAGAAACT GCATTCTCCA CTCCCTGTAG AGGCTCAGGC CAGGAGGGCA GATGGGGGCA TAACTCCTGT AGCAGGCACA GGCATACCCT GTGGAAGTCC TGCTCTTCTG TCGCCACAAC CTATTGGCAT TGTGGTTGCA GCTGTTTCCA GCCCAATCAC GGTTCAGAGA AGTAGGCAAT TAATGTCTCC TAGCCCTGTA CCCATGGCAT CTGCAGACAG CAAAGTTCTT CCTGTAAACT TTCAAGTGGT TACCCAATCT GTTCAACCTG TTAAACAGTC CCCCAAGGCA CCTCATAATA TCTCAGCTAG TCCAGTAAGT GACCGATCAG CTCGTCACCG GTATGCTCAA ATTCTGCCCA AGCCATCTGC CTCAAGTGGC ATAACCCTAC GTTCACCAAC CTTACTCTTC ACCAATAGCC CCATAAAGAC TGTAATGTCT ACTCCACATG TCAGTTCAGT CAATGTAGTC AAGATGACGA CTATATCTCT GGGCTCTAAT GGCAGTGGGA CCAGCACGCC AGCAGATGCT CTTACCAGCA ACAAAGCCAG ACCTGCATCT GCTGGAGTTT CTAGTCTCAG CGACGATCCA CAGCCAGTTA CACGTGTCCG CAGTGGTTCT ATAGCTGCAA TGCCATCTGC TTTGGCTCGG TTAGGGCGCT CAACAACCAT AACACCTATC AGCGATACTA AAATAAACAC AGAAGCCATA ACTGGAAGTG GGCAAGAGCA GGGTGGTATT AGTAGGCTGG CAGCTGCTGC AGATGTTGGT GGTAGTGGTG TACCAAGGTC AGTAATGTTC AAACCCAGAG CAGCTAGCGT ACCCAGTCCT CATGACAAGG CTTCTCCTGG ATTGGGCACA GGGACCAAAT GCAATGGAAG GACTCTCCTT AGAGTCAATA CTATGGCTGC TGGCAGCAAT AATATATCCA ACACTAATGC AAACACTTTG TACCAGATCC CAGGCAGCGC TCAGTCAGTC ACTGATAAAG TAATGACATC ACCCAAAGAT GCAGTGTTGG CATCCAAGAG CCCTCACAAA AGACCTGGCT TGTGCACTGA TTTGAGCCCA ACACCTGTTA AAAAAGCCCA CATCTCAATA TTACCAGACA CTGGTTCAAA TGGACAAAAG TCAGATATAA TGGTGAAGCA AATTCCAAGA TCATGTACTC CAGTCAGGCC AGAAAGTGCA CCCCTCACGG CCATGGCCAA AGTTACCGCA GGTCCGGTAA GAAATTCTGG CTTTCAGACA GTTCACAGGC CACAAAGGAT CTCCCAAACC AATGAGATGC TTTGTGGACT AGAAGGAGCT TCATCAGGAT TGGACTATAG AGTTCCTGTC ACCTCTACTT TAAGTCAGGA TACTTCAATG GAGAATACAA TATTTCAGTC TGTTTGCAGA CCTCGGAGCA TCTCCCAAGG GAGATGGGAA GGATCTTCTA CAACCGTTGA AGGCAGAGTT GTGGTCACCC GAACTGTTAG CGCTCCAGGT CAAGCTTTGC TACAGCAAGC TGCAAAAATC TCACAAGATT TGCTTGTAGA CCAGACCGAT CCTTCTGGAG TTTGTGAAAT GAAAGGTGTC TTTTGGGAGA GTGAGCTGCA AGATGGCACT CAACAACATC AAGATGTTTA TGGTGCACAA ATGGTGCCTG AGCCAAAGAA AATGCCTACC CCAGTGATGG ACCCCCTTCC TGCAATTACT CAAGCTTCTC CTTCCAACCA AGAGGCTCAG ATGAGTGACT ATGGCACCCA GACCAACATC GGCTACTTCA CATTTAATGA TGATGACATG ACGCAGGATA GCATTGTGGA GGAACTTGTA CAAATGGAGG AGCAGATGAA AATTAATAAT AGCATACAAA ATTTCAGCAA CTGTGTGGAT ATTTCGATGC AAGGCCAGCA ACAATCAATG CAGACAACCA TGATGTCTAC CCTACAGACC AACACCTTGT ACTATAGTTC TGCTCATAGC AGGGGTACCC CAATCCAAAC ACCTACACCA ACACCTACTC CAACTTCTGA GATGATGGGA AGTGGCCAGG GATTGATGCA CGAAAGCCCT TGTTCACGCC TAGTTCCCAC CACTCCAGTC GACAGTGCTC TTGGAAGTAG TCGACAAACA CCTATTGGCA CACCACACTC TAGCTGCAGC AGTAGTGTCC CACCCAGCCC TGTGGAATGC AGGAACCCTT TTGCATTTAC TCCGATTAAC TCAAGCATCA CTGGATACCA TGATGGAAGT ACTGTCTCTT CAAGTCCTGT AAAGCCCATG CAAAGACCAA TGGCCACACA TCCAGGGAAG ACTAAACTGG AGTGGATGAA TAGTGGATAC AATAACAATG GTGGGAACTC TAACAATGGC ATTAGCATTC TGCCCAGCTA CCAAGACTTG GTAGATGACC ACTTTCGAAA GCCTCATGCT TTCGCCATCC CAGGCCAGAC CTGTCAGTCA CAGACCAGAC ATCATGACAC GCATATCAGC CGCTTGACAC CCATTTCACC TGTCCAACAG CAAGTGGCAA GTATGGCTAG CCTCAACAAG AAAGAGGGTT TTGCAGTTCC AGCACCTCTT GATAACAAGA CCAGCACTTC CTCTGGAACA TTTCGTTGTC GAAGCGTTAG CCCGGCAGTC AGACAGCGCA ACCTGAGTGG GACCCAAGGT CCAAATGTTC CTGACACCAT GGTCTCTCCA TTCAACTCAC CTGTAACACC TGAAGTGCTA AGCATATTTT CTAACAGTGA CCCTGACGCA AGCATCAGCA GCATGGCACA GAGGAGTCAG TCCGTTCCAG TTACTGTGAT GATGCAGTCT GAGGTGCTGC CCATGCAAGC AGGCCAGCAG ATTAATACCA AAAACATCAC CAATGTCCTC ATCAGCAAAA TGGATGGTGA TGGAGATGAC TCAGTACGTG GCCTCGGAAT CAACAACATG CCATCCAACT ATACTGCCCG CATGAATCTC ACCCAGATTC TGGAGACCAC CACAGTGCCC AGCCTCCCTG GTAGTGCCAG CCACCAAGCT CTGATCTCAC CTTGTTCATC AGCCTTTGAG TCCCAGAAGC CTGGTTACCT CATGAAAAAT GCCAGGGAGG AGCCGATGAT CTTCTCTGTT GGTGAAAGCC AAGCACAATC AGCCTCAGTG GAGCACCAGC CACCACCACC ACAACAACAG CAGCAGCAGC ACTTGGGTAG ACGGCAGCTC CTTGGGCAGG AACAGCAAAG TCAGGCCATT CTGTTGCCTT TACAGCAAAA CCTCCAACAA CATCAGCACC AGCAACCCTT GGATCTAGAT CGAACTGTTA AAGATCTTTT ACATGAGGAA AGCTTGAATG CTGGCTCACA GCTTGTGGGG CAAGGATCAG AGCTCAGTGC TGGAGGTTCA GAGTTTCCTA ACAATATGCG ACTGACTTCT GAACTGACAG GTAGCATAAA TGATTTAAAT ACTTTGGACA CCAACCTTCT TTTTGACCCC AGTCAACAGC AAGGACAATA TGAAGACTCG ACACTGGAAG AACTGAAGAA TGACCCACTT TTTCAACAGA TTTGCAGCGA GACTGTGAAT TCTGCTGGCT TTGACTGGTT GGAGAGCAAA GACCAGGCCA CAGTGGAAAT GCTGGGTTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
ODa13236 |
Clone ID Related Accession (Same CDS sequence) |
XM_683773.8
, XM_683773.9
|
Accession Version |
XM_683773.9 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 4530bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2017-06-14 |
Organism |
Danio rerio(zebrafish) |
Product |
DNA-binding protein RFX7 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007118.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 15, 2017 this sequence version replaced XM_683773.8.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Danio rerio Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.4
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821 2881 2941 3001 3061 3121 3181 3241 3301 3361 3421 3481 3541 3601 3661 3721 3781 3841 3901 3961 4021 4081 4141 4201 4261 4321 4381 4441 4501
| ATGGCAGATG ACCAGCAGCA GTCGGGACCC GGAGCTGGAC CTTTACCGTC CGCGGTTCAG GGATTGCAAG GGCCCGAGGC GAGTGCTCTG CAGCTGAAGA TAAAGAACTC TATCTGCAAA ACTGTACAAT CGAAGGTGGA TTGCATTTTG CAAGATGTGG AGAAGCTTAC GGACATTGAA AAACTCTACC TCTATCTCAA GTTGCCTTCT GGACCCAGCA GTGGCAATGA GAAAAATGAG CAGAGCTCCA TGACATCAAG TCGTACCCAG CAGATGCACG CATTTAGCTG GATTCGTAAC CATCTTGAGG AGCATCCGGA AACATCGCTG CCTAAACAGG AAGTCTACGA TGAGTACAAG AGTTACTGTG ATAGTTTGGG GTATCACGCT CTCAGTGCTG CGGACTTTGG AAAGATCATG AAGAACGTCT TTCCCAACAT GAAGGCACGT CGACTTGGCA TGCGAGGCAA ATCCAAATAT TGCTATAGTG GACTTAGGAA GAAGACCTTT GTACAGATGC CATCTCTTCC CAACTTAGAT CTTCACAAAT CGGGTGATGG GTGTGAAGTG TTTGAGTCTA CTGGTCAACT ATCCAGTGCT GAAGATGAGG TGCGCATGGC TGCATGTGGG TTGGTGTGCG AGTGGGCACA GAAGGTGCTG AGTCGGCAGT TTGACAGCGT TGAAGATCTG GCTCGGTTTC TTTTAAACAG CCACTACATA GGAACCAAGT CTGTGGCTGC TCTTACTGTG ATGACCGGTT CCCCCTCAGG AGCAAAGATG TCAATTCAGT CATCTGCATT TGCTCCCACA ACCGATTCAC ACTCATTCCA GCCTCAGGTT AAAACCCTGG TTTCACCCTC CATAGATGCC AAACAGCAGC TACAACGGAA AATACAGAAG AAACAGCAAG AACAGAAACT GCATTCTCCA CTCCCTGTAG AGGCTCAGGC CAGGAGGGCA GATGGGGGCA TAACTCCTGT AGCAGGCACA GGCATACCCT GTGGAAGTCC TGCTCTTCTG TCGCCACAAC CTATTGGCAT TGTGGTTGCA GCTGTTTCCA GCCCAATCAC GGTTCAGAGA AGTAGGCAAT TAATGTCTCC TAGCCCTGTA CCCATGGCAT CTGCAGACAG CAAAGTTCTT CCTGTAAACT TTCAAGTGGT TACCCAATCT GTTCAACCTG TTAAACAGTC CCCCAAGGCA CCTCATAATA TCTCAGCTAG TCCAGTAAGT GACCGATCAG CTCGTCACCG GTATGCTCAA ATTCTGCCCA AGCCATCTGC CTCAAGTGGC ATAACCCTAC GTTCACCAAC CTTACTCTTC ACCAATAGCC CCATAAAGAC TGTAATGTCT ACTCCACATG TCAGTTCAGT CAATGTAGTC AAGATGACGA CTATATCTCT GGGCTCTAAT GGCAGTGGGA CCAGCACGCC AGCAGATGCT CTTACCAGCA ACAAAGCCAG ACCTGCATCT GCTGGAGTTT CTAGTCTCAG CGACGATCCA CAGCCAGTTA CACGTGTCCG CAGTGGTTCT ATAGCTGCAA TGCCATCTGC TTTGGCTCGG TTAGGGCGCT CAACAACCAT AACACCTATC AGCGATACTA AAATAAACAC AGAAGCCATA ACTGGAAGTG GGCAAGAGCA GGGTGGTATT AGTAGGCTGG CAGCTGCTGC AGATGTTGGT GGTAGTGGTG TACCAAGGTC AGTAATGTTC AAACCCAGAG CAGCTAGCGT ACCCAGTCCT CATGACAAGG CTTCTCCTGG ATTGGGCACA GGGACCAAAT GCAATGGAAG GACTCTCCTT AGAGTCAATA CTATGGCTGC TGGCAGCAAT AATATATCCA ACACTAATGC AAACACTTTG TACCAGATCC CAGGCAGCGC TCAGTCAGTC ACTGATAAAG TAATGACATC ACCCAAAGAT GCAGTGTTGG CATCCAAGAG CCCTCACAAA AGACCTGGCT TGTGCACTGA TTTGAGCCCA ACACCTGTTA AAAAAGCCCA CATCTCAATA TTACCAGACA CTGGTTCAAA TGGACAAAAG TCAGATATAA TGGTGAAGCA AATTCCAAGA TCATGTACTC CAGTCAGGCC AGAAAGTGCA CCCCTCACGG CCATGGCCAA AGTTACCGCA GGTCCGGTAA GAAATTCTGG CTTTCAGACA GTTCACAGGC CACAAAGGAT CTCCCAAACC AATGAGATGC TTTGTGGACT AGAAGGAGCT TCATCAGGAT TGGACTATAG AGTTCCTGTC ACCTCTACTT TAAGTCAGGA TACTTCAATG GAGAATACAA TATTTCAGTC TGTTTGCAGA CCTCGGAGCA TCTCCCAAGG GAGATGGGAA GGATCTTCTA CAACCGTTGA AGGCAGAGTT GTGGTCACCC GAACTGTTAG CGCTCCAGGT CAAGCTTTGC TACAGCAAGC TGCAAAAATC TCACAAGATT TGCTTGTAGA CCAGACCGAT CCTTCTGGAG TTTGTGAAAT GAAAGGTGTC TTTTGGGAGA GTGAGCTGCA AGATGGCACT CAACAACATC AAGATGTTTA TGGTGCACAA ATGGTGCCTG AGCCAAAGAA AATGCCTACC CCAGTGATGG ACCCCCTTCC TGCAATTACT CAAGCTTCTC CTTCCAACCA AGAGGCTCAG ATGAGTGACT ATGGCACCCA GACCAACATC GGCTACTTCA CATTTAATGA TGATGACATG ACGCAGGATA GCATTGTGGA GGAACTTGTA CAAATGGAGG AGCAGATGAA AATTAATAAT AGCATACAAA ATTTCAGCAA CTGTGTGGAT ATTTCGATGC AAGGCCAGCA ACAATCAATG CAGACAACCA TGATGTCTAC CCTACAGACC AACACCTTGT ACTATAGTTC TGCTCATAGC AGGGGTACCC CAATCCAAAC ACCTACACCA ACACCTACTC CAACTTCTGA GATGATGGGA AGTGGCCAGG GATTGATGCA CGAAAGCCCT TGTTCACGCC TAGTTCCCAC CACTCCAGTC GACAGTGCTC TTGGAAGTAG TCGACAAACA CCTATTGGCA CACCACACTC TAGCTGCAGC AGTAGTGTCC CACCCAGCCC TGTGGAATGC AGGAACCCTT TTGCATTTAC TCCGATTAAC TCAAGCATCA CTGGATACCA TGATGGAAGT ACTGTCTCTT CAAGTCCTGT AAAGCCCATG CAAAGACCAA TGGCCACACA TCCAGGGAAG ACTAAACTGG AGTGGATGAA TAGTGGATAC AATAACAATG GTGGGAACTC TAACAATGGC ATTAGCATTC TGCCCAGCTA CCAAGACTTG GTAGATGACC ACTTTCGAAA GCCTCATGCT TTCGCCATCC CAGGCCAGAC CTGTCAGTCA CAGACCAGAC ATCATGACAC GCATATCAGC CGCTTGACAC CCATTTCACC TGTCCAACAG CAAGTGGCAA GTATGGCTAG CCTCAACAAG AAAGAGGGTT TTGCAGTTCC AGCACCTCTT GATAACAAGA CCAGCACTTC CTCTGGAACA TTTCGTTGTC GAAGCGTTAG CCCGGCAGTC AGACAGCGCA ACCTGAGTGG GACCCAAGGT CCAAATGTTC CTGACACCAT GGTCTCTCCA TTCAACTCAC CTGTAACACC TGAAGTGCTA AGCATATTTT CTAACAGTGA CCCTGACGCA AGCATCAGCA GCATGGCACA GAGGAGTCAG TCCGTTCCAG TTACTGTGAT GATGCAGTCT GAGGTGCTGC CCATGCAAGC AGGCCAGCAG ATTAATACCA AAAACATCAC CAATGTCCTC ATCAGCAAAA TGGATGGTGA TGGAGATGAC TCAGTACGTG GCCTCGGAAT CAACAACATG CCATCCAACT ATACTGCCCG CATGAATCTC ACCCAGATTC TGGAGACCAC CACAGTGCCC AGCCTCCCTG GTAGTGCCAG CCACCAAGCT CTGATCTCAC CTTGTTCATC AGCCTTTGAG TCCCAGAAGC CTGGTTACCT CATGAAAAAT GCCAGGGAGG AGCCGATGAT CTTCTCTGTT GGTGAAAGCC AAGCACAATC AGCCTCAGTG GAGCACCAGC CACCACCACC ACAACAACAG CAGCAGCAGC ACTTGGGTAG ACGGCAGCTC CTTGGGCAGG AACAGCAAAG TCAGGCCATT CTGTTGCCTT TACAGCAAAA CCTCCAACAA CATCAGCACC AGCAACCCTT GGATCTAGAT CGAACTGTTA AAGATCTTTT ACATGAGGAA AGCTTGAATG CTGGCTCACA GCTTGTGGGG CAAGGATCAG AGCTCAGTGC TGGAGGTTCA GAGTTTCCTA ACAATATGCG ACTGACTTCT GAACTGACAG GTAGCATAAA TGATTTAAAT ACTTTGGACA CCAACCTTCT TTTTGACCCC AGTCAACAGC AAGGACAATA TGAAGACTCG ACACTGGAAG AACTGAAGAA TGACCCACTT TTTCAACAGA TTTGCAGCGA GACTGTGAAT TCTGCTGGCT TTGACTGGTT GGAGAGCAAA GACCAGGCCA CAGTGGAAAT GCTGGGTTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_688865.4 |
CDS | 617..5146 |
Translation | |
Target ORF information:
RefSeq Version | XM_683773.9 |
Organism | Danio rerio(zebrafish) |
Definition | Danio rerio regulatory factor X, 7 (rfx7), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_683773.9 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821 2881 2941 3001 3061 3121 3181 3241 3301 3361 3421 3481 3541 3601 3661 3721 3781 3841 3901 3961 4021 4081 4141 4201 4261 4321 4381 4441 4501
| ATGGCAGATG ACCAGCAGCA GTCGGGACCC GGAGCTGGAC CTTTACCGTC CGCGGTTCAG GGATTGCAAG GGCCCGAGGC GAGTGCTCTG CAGCTGAAGA TAAAGAACTC TATCTGCAAA ACTGTACAAT CGAAGGTGGA TTGCATTTTG CAAGATGTGG AGAAGCTTAC GGACATTGAA AAACTCTACC TCTATCTCAA GTTGCCTTCT GGACCCAGCA GTGGCAATGA GAAAAATGAG CAGAGCTCCA TGACATCAAG TCGTACCCAG CAGATGCACG CATTTAGCTG GATTCGTAAC CATCTTGAGG AGCATCCGGA AACATCGCTG CCTAAACAGG AAGTCTACGA TGAGTACAAG AGTTACTGTG ATAGTTTGGG GTATCACGCT CTCAGTGCTG CGGACTTTGG AAAGATCATG AAGAACGTCT TTCCCAACAT GAAGGCACGT CGACTTGGCA TGCGAGGCAA ATCCAAATAT TGCTATAGTG GACTTAGGAA GAAGACCTTT GTACAGATGC CATCTCTTCC CAACTTAGAT CTTCACAAAT CGGGTGATGG GTGTGAAGTG TTTGAGTCTA CTGGTCAACT ATCCAGTGCT GAAGATGAGG TGCGCATGGC TGCATGTGGG TTGGTGTGCG AGTGGGCACA GAAGGTGCTG AGTCGGCAGT TTGACAGCGT TGAAGATCTG GCTCGGTTTC TTTTAAACAG CCACTACATA GGAACCAAGT CTGTGGCTGC TCTTACTGTG ATGACCGGTT CCCCCTCAGG AGCAAAGATG TCAATTCAGT CATCTGCATT TGCTCCCACA ACCGATTCAC ACTCATTCCA GCCTCAGGTT AAAACCCTGG TTTCACCCTC CATAGATGCC AAACAGCAGC TACAACGGAA AATACAGAAG AAACAGCAAG AACAGAAACT GCATTCTCCA CTCCCTGTAG AGGCTCAGGC CAGGAGGGCA GATGGGGGCA TAACTCCTGT AGCAGGCACA GGCATACCCT GTGGAAGTCC TGCTCTTCTG TCGCCACAAC CTATTGGCAT TGTGGTTGCA GCTGTTTCCA GCCCAATCAC GGTTCAGAGA AGTAGGCAAT TAATGTCTCC TAGCCCTGTA CCCATGGCAT CTGCAGACAG CAAAGTTCTT CCTGTAAACT TTCAAGTGGT TACCCAATCT GTTCAACCTG TTAAACAGTC CCCCAAGGCA CCTCATAATA TCTCAGCTAG TCCAGTAAGT GACCGATCAG CTCGTCACCG GTATGCTCAA ATTCTGCCCA AGCCATCTGC CTCAAGTGGC ATAACCCTAC GTTCACCAAC CTTACTCTTC ACCAATAGCC CCATAAAGAC TGTAATGTCT ACTCCACATG TCAGTTCAGT CAATGTAGTC AAGATGACGA CTATATCTCT GGGCTCTAAT GGCAGTGGGA CCAGCACGCC AGCAGATGCT CTTACCAGCA ACAAAGCCAG ACCTGCATCT GCTGGAGTTT CTAGTCTCAG CGACGATCCA CAGCCAGTTA CACGTGTCCG CAGTGGTTCT ATAGCTGCAA TGCCATCTGC TTTGGCTCGG TTAGGGCGCT CAACAACCAT AACACCTATC AGCGATACTA AAATAAACAC AGAAGCCATA ACTGGAAGTG GGCAAGAGCA GGGTGGTATT AGTAGGCTGG CAGCTGCTGC AGATGTTGGT GGTAGTGGTG TACCAAGGTC AGTAATGTTC AAACCCAGAG CAGCTAGCGT ACCCAGTCCT CATGACAAGG CTTCTCCTGG ATTGGGCACA GGGACCAAAT GCAATGGAAG GACTCTCCTT AGAGTCAATA CTATGGCTGC TGGCAGCAAT AATATATCCA ACACTAATGC AAACACTTTG TACCAGATCC CAGGCAGCGC TCAGTCAGTC ACTGATAAAG TAATGACATC ACCCAAAGAT GCAGTGTTGG CATCCAAGAG CCCTCACAAA AGACCTGGCT TGTGCACTGA TTTGAGCCCA ACACCTGTTA AAAAAGCCCA CATCTCAATA TTACCAGACA CTGGTTCAAA TGGACAAAAG TCAGATATAA TGGTGAAGCA AATTCCAAGA TCATGTACTC CAGTCAGGCC AGAAAGTGCA CCCCTCACGG CCATGGCCAA AGTTACCGCA GGTCCGGTAA GAAATTCTGG CTTTCAGACA GTTCACAGGC CACAAAGGAT CTCCCAAACC AATGAGATGC TTTGTGGACT AGAAGGAGCT TCATCAGGAT TGGACTATAG AGTTCCTGTC ACCTCTACTT TAAGTCAGGA TACTTCAATG GAGAATACAA TATTTCAGTC TGTTTGCAGA CCTCGGAGCA TCTCCCAAGG GAGATGGGAA GGATCTTCTA CAACCGTTGA AGGCAGAGTT GTGGTCACCC GAACTGTTAG CGCTCCAGGT CAAGCTTTGC TACAGCAAGC TGCAAAAATC TCACAAGATT TGCTTGTAGA CCAGACCGAT CCTTCTGGAG TTTGTGAAAT GAAAGGTGTC TTTTGGGAGA GTGAGCTGCA AGATGGCACT CAACAACATC AAGATGTTTA TGGTGCACAA ATGGTGCCTG AGCCAAAGAA AATGCCTACC CCAGTGATGG ACCCCCTTCC TGCAATTACT CAAGCTTCTC CTTCCAACCA AGAGGCTCAG ATGAGTGACT ATGGCACCCA GACCAACATC GGCTACTTCA CATTTAATGA TGATGACATG ACGCAGGATA GCATTGTGGA GGAACTTGTA CAAATGGAGG AGCAGATGAA AATTAATAAT AGCATACAAA ATTTCAGCAA CTGTGTGGAT ATTTCGATGC AAGGCCAGCA ACAATCAATG CAGACAACCA TGATGTCTAC CCTACAGACC AACACCTTGT ACTATAGTTC TGCTCATAGC AGGGGTACCC CAATCCAAAC ACCTACACCA ACACCTACTC CAACTTCTGA GATGATGGGA AGTGGCCAGG GATTGATGCA CGAAAGCCCT TGTTCACGCC TAGTTCCCAC CACTCCAGTC GACAGTGCTC TTGGAAGTAG TCGACAAACA CCTATTGGCA CACCACACTC TAGCTGCAGC AGTAGTGTCC CACCCAGCCC TGTGGAATGC AGGAACCCTT TTGCATTTAC TCCGATTAAC TCAAGCATCA CTGGATACCA TGATGGAAGT ACTGTCTCTT CAAGTCCTGT AAAGCCCATG CAAAGACCAA TGGCCACACA TCCAGGGAAG ACTAAACTGG AGTGGATGAA TAGTGGATAC AATAACAATG GTGGGAACTC TAACAATGGC ATTAGCATTC TGCCCAGCTA CCAAGACTTG GTAGATGACC ACTTTCGAAA GCCTCATGCT TTCGCCATCC CAGGCCAGAC CTGTCAGTCA CAGACCAGAC ATCATGACAC GCATATCAGC CGCTTGACAC CCATTTCACC TGTCCAACAG CAAGTGGCAA GTATGGCTAG CCTCAACAAG AAAGAGGGTT TTGCAGTTCC AGCACCTCTT GATAACAAGA CCAGCACTTC CTCTGGAACA TTTCGTTGTC GAAGCGTTAG CCCGGCAGTC AGACAGCGCA ACCTGAGTGG GACCCAAGGT CCAAATGTTC CTGACACCAT GGTCTCTCCA TTCAACTCAC CTGTAACACC TGAAGTGCTA AGCATATTTT CTAACAGTGA CCCTGACGCA AGCATCAGCA GCATGGCACA GAGGAGTCAG TCCGTTCCAG TTACTGTGAT GATGCAGTCT GAGGTGCTGC CCATGCAAGC AGGCCAGCAG ATTAATACCA AAAACATCAC CAATGTCCTC ATCAGCAAAA TGGATGGTGA TGGAGATGAC TCAGTACGTG GCCTCGGAAT CAACAACATG CCATCCAACT ATACTGCCCG CATGAATCTC ACCCAGATTC TGGAGACCAC CACAGTGCCC AGCCTCCCTG GTAGTGCCAG CCACCAAGCT CTGATCTCAC CTTGTTCATC AGCCTTTGAG TCCCAGAAGC CTGGTTACCT CATGAAAAAT GCCAGGGAGG AGCCGATGAT CTTCTCTGTT GGTGAAAGCC AAGCACAATC AGCCTCAGTG GAGCACCAGC CACCACCACC ACAACAACAG CAGCAGCAGC ACTTGGGTAG ACGGCAGCTC CTTGGGCAGG AACAGCAAAG TCAGGCCATT CTGTTGCCTT TACAGCAAAA CCTCCAACAA CATCAGCACC AGCAACCCTT GGATCTAGAT CGAACTGTTA AAGATCTTTT ACATGAGGAA AGCTTGAATG CTGGCTCACA GCTTGTGGGG CAAGGATCAG AGCTCAGTGC TGGAGGTTCA GAGTTTCCTA ACAATATGCG ACTGACTTCT GAACTGACAG GTAGCATAAA TGATTTAAAT ACTTTGGACA CCAACCTTCT TTTTGACCCC AGTCAACAGC AAGGACAATA TGAAGACTCG ACACTGGAAG AACTGAAGAA TGACCCACTT TTTCAACAGA TTTGCAGCGA GACTGTGAAT TCTGCTGGCT TTGACTGGTT GGAGAGCAAA GACCAGGCCA CAGTGGAAAT GCTGGGTTAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.