Gene Symbol | b3gnt3 |
Entrez Gene ID | 561172 |
Full Name | UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 |
Synonyms | wu:fk30b12,zgc:171538 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » b3gnt3 cDNA ORF clone
Gene Symbol | b3gnt3 |
Entrez Gene ID | 561172 |
Full Name | UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 |
Synonyms | wu:fk30b12,zgc:171538 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_009303809.3 | XP_009302084.1 | beta-3-galactosyltransferase-like isoform X1 |
XM_005166854.3 | XP_005166911.1 | beta-3-galactosyltransferase-like isoform X1 |
XM_005166856.3 | XP_005166913.1 | beta-3-galactosyltransferase-like isoform X1 |
XM_009303809.2 | XP_009302084.1 | beta-3-galactosyltransferase-like isoform X1 |
XM_005166854.4 | XP_005166911.1 | beta-3-galactosyltransferase-like isoform X1 |
NM_001110110.2 | NP_001103580.1 | beta-3-galactosyltransferase-like |
XM_005166856.4 | XP_005166913.1 | beta-3-galactosyltransferase-like isoform X1 |
Canis lupus familiaris (dog) | B3GNT3 | XP_541947.1 |
Danio rerio (zebrafish) | si:ch211-126g16.11 | NP_001121717.1 |
Danio rerio (zebrafish) | b3gnt3 | NP_001103580.1 |
B3GNT3 | XP_001113907.1 | |
Danio rerio (zebrafish) | zgc:86586 | NP_001009903.2 |
Homo sapiens (human) | B3GNT3 | NP_055071.2 |
Xenopus tropicalis (tropical clawed frog) | LOC100145701 | NP_001120547.1 |
Pan troglodytes (chimpanzee) | B3GNT3 | XP_001173674.1 |
Bos taurus (cattle) | B3GNT3 | NP_001091943.1 |
Mus musculus (house mouse) | B3gnt3 | NP_082465.3 |
Rattus norvegicus (Norway rat) | B3gnt3 | NP_001099538.1 |
Danio rerio (zebrafish) | si:ch211-126g16.10 | NP_001122024.1 |
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
Global analysis of the haematopoietic and endothelial transcriptome during zebrafish development.
Cannon JE, Place ES, Eve AM, Bradshaw CR, Sesay A, Morrell NW, Smith JC
Mechanisms of development130(2-3)122-31(2013 Feb)
Evolution of JAK-STAT pathway components: mechanisms and role in immune system development.
Liongue C, O'Sullivan LA, Trengove MC, Ward AC
PloS one7(3)e32777(2012)
Identification of vasculature-specific genes by microarray analysis of Etsrp/Etv2 overexpressing zebrafish embryos.
Wong KS, Proulx K, Rost MS, Sumanas S
Developmental dynamics : an official publication of the American Association of Anatomists238(7)1836-50(2009 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following b3gnt3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the b3gnt3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa13997 | |
Clone ID Related Accession (Same CDS sequence) | XM_009303809.3 , XM_005166854.3 , XM_005166856.3 , XM_009303809.2 , XM_005166854.4 , NM_001110110.2 , XM_005166856.4 | |
Accession Version | NM_001110110.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1161bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-11-23 | |
Organism | Danio rerio(zebrafish) | |
Product | beta-3-galactosyltransferase-like | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CR786572.20. On Aug 7, 2009 this sequence version replaced NM_001110110.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: BC153957.1, CK028198.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAAAAAGA AAACAGTGGA CATTCTAGCA TTATTTCTGA CAGGTGTTGT GTGCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001103580.1 |
CDS | 267..1427 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001110110.2 |
1 | ATGAAAAAGA AAACAGTGGA CATTCTAGCA TTATTTCTGA CAGGTGTTGT GTGCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa13997 | |
Clone ID Related Accession (Same CDS sequence) | XM_009303809.3 , XM_005166854.3 , XM_005166856.3 , XM_009303809.2 , XM_005166854.4 , NM_001110110.2 , XM_005166856.4 | |
Accession Version | XM_009303809.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1161bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | beta-3-galactosyltransferase-like isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007119.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_009303809.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAAAAGA AAACAGTGGA CATTCTAGCA TTATTTCTGA CAGGTGTTGT GTGCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009302084.1 |
CDS | 269..1429 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009303809.3 |
1 | ATGAAAAAGA AAACAGTGGA CATTCTAGCA TTATTTCTGA CAGGTGTTGT GTGCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa13997 | |
Clone ID Related Accession (Same CDS sequence) | XM_009303809.3 , XM_005166854.3 , XM_005166856.3 , XM_009303809.2 , XM_005166854.4 , NM_001110110.2 , XM_005166856.4 | |
Accession Version | XM_005166854.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1161bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | beta-3-galactosyltransferase-like isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007119.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005166854.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAAAAGA AAACAGTGGA CATTCTAGCA TTATTTCTGA CAGGTGTTGT GTGCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005166911.1 |
CDS | 164..1324 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005166854.3 |
1 | ATGAAAAAGA AAACAGTGGA CATTCTAGCA TTATTTCTGA CAGGTGTTGT GTGCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa13997 | |
Clone ID Related Accession (Same CDS sequence) | XM_009303809.3 , XM_005166854.3 , XM_005166856.3 , XM_009303809.2 , XM_005166854.4 , NM_001110110.2 , XM_005166856.4 | |
Accession Version | XM_005166856.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1161bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | beta-3-galactosyltransferase-like isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007119.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005166856.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAAAAGA AAACAGTGGA CATTCTAGCA TTATTTCTGA CAGGTGTTGT GTGCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005166913.1 |
CDS | 169..1329 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005166856.3 |
1 | ATGAAAAAGA AAACAGTGGA CATTCTAGCA TTATTTCTGA CAGGTGTTGT GTGCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa13997 | |
Clone ID Related Accession (Same CDS sequence) | XM_009303809.3 , XM_005166854.3 , XM_005166856.3 , XM_009303809.2 , XM_005166854.4 , NM_001110110.2 , XM_005166856.4 | |
Accession Version | XM_009303809.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1161bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | beta-3-galactosyltransferase-like isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007119.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009303809.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAAAAGA AAACAGTGGA CATTCTAGCA TTATTTCTGA CAGGTGTTGT GTGCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009302084.1 |
CDS | 264..1424 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009303809.2 |
1 | ATGAAAAAGA AAACAGTGGA CATTCTAGCA TTATTTCTGA CAGGTGTTGT GTGCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa13997 | |
Clone ID Related Accession (Same CDS sequence) | XM_009303809.3 , XM_005166854.3 , XM_005166856.3 , XM_009303809.2 , XM_005166854.4 , NM_001110110.2 , XM_005166856.4 | |
Accession Version | XM_005166854.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1161bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | beta-3-galactosyltransferase-like isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007119.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005166854.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAAAAGA AAACAGTGGA CATTCTAGCA TTATTTCTGA CAGGTGTTGT GTGCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005166911.1 |
CDS | 169..1329 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005166854.4 |
1 | ATGAAAAAGA AAACAGTGGA CATTCTAGCA TTATTTCTGA CAGGTGTTGT GTGCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa13997 | |
Clone ID Related Accession (Same CDS sequence) | XM_009303809.3 , XM_005166854.3 , XM_005166856.3 , XM_009303809.2 , XM_005166854.4 , NM_001110110.2 , XM_005166856.4 | |
Accession Version | XM_005166856.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1161bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | beta-3-galactosyltransferase-like isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007119.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005166856.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAAAAGA AAACAGTGGA CATTCTAGCA TTATTTCTGA CAGGTGTTGT GTGCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005166913.1 |
CDS | 174..1334 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005166856.4 |
1 | ATGAAAAAGA AAACAGTGGA CATTCTAGCA TTATTTCTGA CAGGTGTTGT GTGCCTGCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RFX transcription factors are essential for hearing in mice. |
Global analysis of the haematopoietic and endothelial transcriptome during zebrafish development. |
Evolution of JAK-STAT pathway components: mechanisms and role in immune system development. |
Identification of vasculature-specific genes by microarray analysis of Etsrp/Etv2 overexpressing zebrafish embryos. |