Gene Symbol | ahi1 |
Entrez Gene ID | 562701 |
Full Name | Abelson helper integration site 1 |
General protein information |
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Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » ahi1 cDNA ORF clone
gRNAs
Gene Symbol | ahi1 |
Entrez Gene ID | 562701 |
Full Name | Abelson helper integration site 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
NM_001319989.1 | NP_001306918.1 | jouberin |
Homo sapiens (human) | AHI1 | NP_001128303.1 |
Rattus norvegicus (Norway rat) | Ahi1 | NP_001002277.1 |
Mus musculus (house mouse) | Ahi1 | NP_080479.2 |
Gallus gallus (chicken) | AHI1 | XP_004935779.1 |
AHI1 | XP_001099136.2 | |
Canis lupus familiaris (dog) | AHI1 | XP_005615497.1 |
Xenopus tropicalis (tropical clawed frog) | ahi1 | XP_004914630.1 |
Pan troglodytes (chimpanzee) | AHI1 | XP_527511.3 |
Bos taurus (cattle) | AHI1 | XP_002690311.1 |
Danio rerio (zebrafish) | ahi1 | NP_001071029.1 |
The Ciliopathy Gene ahi1 Is Required for Zebrafish Cone Photoreceptor Outer Segment Morphogenesis and Survival.
Lessieur EM, Fogerty J, Gaivin RJ, Song P, Perkins BD
Investigative ophthalmology & visual science58(1)448-460(2017 01)
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
Non-manifesting AHI1 truncations indicate localized loss-of-function tolerance in a severe Mendelian disease gene.
Elsayed SM, Phillips JB, Heller R, Thoenes M, Elsobky E, N?rnberg G, N?rnberg P, Seland S, Ebermann I, Altm?ller J, Thiele H, Toliat M, K?rber F, Hu XJ, Wu YD, Zaki MS, Abdel-Salam G, Gleeson J, Boltshauser E, Westerfield M, Bolz HJ
Human molecular genetics24(9)2594-603(2015 May)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The ahi1lri46 mutation in zebrafish resulted in shorter cone outer segments but did not affect visual behavior at 5 days after fertilization (dpf).
Title: The Ciliopathy Gene ahi1 Is Required for Zebrafish Cone Photoreceptor Outer Segment Morphogenesis and Survival.
a role for Ahi1 in epithelial cell organization and ciliary formation and explain the ciliopathy phenotype of AHI1 mutations in man.
Title: Modelling a ciliopathy: Ahi1 knockdown in model systems reveals an essential role in brain, retinal, and renal development.
Results describe spatiotemporal expression patterns of AHI1 and orthologs throughout development, in human, mouse, and zebrafish, and suggest roles for AHI1 in neurodevelopmental processes behind most of the neuroanatomical defects in Joubert syndrome.
Title: Species differences in the expression of Ahi1, a protein implicated in the neurodevelopmental disorder Joubert syndrome, with preferential accumulation to stigmoid bodies.
We cloned the full cDNA sequence of Ahi-1 homologous in zebrafish.RT-PCR reveal that ZAhi-1 expressed highest in the mature gonad. In situ hybridization results of zebrafish gonad show that ZAhi-1 only expressed in the early stages' gamete cells.[ZAhi-1]
Title: Molecular cloning of a novel gene ZAhi-1 and its expression analysis during zebrafish gametogenesis.
The following ahi1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ahi1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa43867 | |
Clone ID Related Accession (Same CDS sequence) | NM_001319989.1 | |
Accession Version | NM_001319989.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3573bp) Protein sequence SNP |
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Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2020-01-04 | |
Organism | Danio rerio(zebrafish) | |
Product | jouberin | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EB855290.1, EH466743.1, BX248131.6, EB931323.1 and CR407704.10. On Feb 9, 2016 this sequence version replaced XM_009292820.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data because no single transcript from the reference strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data. ##Evidence-Data-START## Transcript exon combination :: GDQH01019081.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGCCAGCAG GTCAAAGTGA TGTGAGAGCT AAGACGAAAG CTCGCTTTGA CGAGGTTTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001306918.1 |
CDS | 143..3715 |
Translation |
Target ORF information:
Target ORF information:
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1 | ATGCCAGCAG GTCAAAGTGA TGTGAGAGCT AAGACGAAAG CTCGCTTTGA CGAGGTTTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The Ciliopathy Gene ahi1 Is Required for Zebrafish Cone Photoreceptor Outer Segment Morphogenesis and Survival. |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
RFX transcription factors are essential for hearing in mice. |
Non-manifesting AHI1 truncations indicate localized loss-of-function tolerance in a severe Mendelian disease gene. |