Gene Symbol | hpn |
Entrez Gene ID | 569259 |
Full Name | si:dkey-33i11.3 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » hpn cDNA ORF clone
Gene Symbol | hpn |
Entrez Gene ID | 569259 |
Full Name | si:dkey-33i11.3 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_021466731.1 | XP_021322406.1 | serine protease hepsin isoform X1 |
NM_001098187.1 | NP_001091657.1 | serine protease hepsin |
NM_001098187.2 | NP_001091657.2 | serine protease hepsin |
Pan troglodytes (chimpanzee) | HPN | XP_001157575.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP004552 | XP_313850.5 |
Canis lupus familiaris (dog) | HPN | XP_541697.2 |
Bos taurus (cattle) | HPN | NP_001073710.1 |
Danio rerio (zebrafish) | si:dkey-33i11.3 | NP_001091657.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP008649 | XP_314746.4 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP004568 | XP_313873.5 |
Homo sapiens (human) | HPN | NP_892028.1 |
Rattus norvegicus (Norway rat) | Hpn | NP_058808.1 |
Danio rerio (zebrafish) | LOC100536154 | XP_003200307.1 |
HPN | XP_001093699.2 | |
Mus musculus (house mouse) | Hpn | NP_032307.2 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
Role of hepsin in factor VII activation in zebrafish.
Khandekar G, Jagadeeswaran P
Blood cells, molecules & diseases52(1)76-81(2014 Jan)
Hematopoietic gene expression profile in zebrafish kidney marrow.
Song HD, Sun XJ, Deng M, Zhang GW, Zhou Y, Wu XY, Sheng Y, Chen Y, Ruan Z, Jiang CL, Fan HY, Zon LI, Kanki JP, Liu TX, Look AT, Chen Z
Proceedings of the National Academy of Sciences of the United States of America101(46)16240-5(2004 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Hepsin plays a physiologically important role in factor VII activation and hemostasis in zebrafish.
Title: Role of hepsin in factor VII activation in zebrafish.
The following hpn gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the hpn cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa32828 | |
Clone ID Related Accession (Same CDS sequence) | NM_001098187.1 | |
Accession Version | NM_001098187.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1272bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-08-05 | |
Organism | Danio rerio(zebrafish) | |
Product | serine protease hepsin | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC139858.1. On May 24, 2007 this sequence version replaced XM_692634.2. ##Evidence-Data-START## Transcript exon combination :: BC139858.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168447, SAMEA2168448 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTCAGAGA AGAAGGTCGG ACGTCCAGGC ATGAGCATCT TCAGTCCATG CCGGGTGGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001091657.1 |
CDS | 257..1528 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001098187.1 |
1 | ATGTCAGAGA AGAAGGTCGG ACGTCCAGGC ATGAGCATCT TCAGTCCATG CCGGGTGGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa159701 | |
Clone ID Related Accession (Same CDS sequence) | NM_001098187.2 | |
Accession Version | NM_001098187.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1278bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-03-20 | |
Organism | Danio rerio(zebrafish) | |
Product | serine protease hepsin | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from FP016247.6. On Aug 15, 2018 this sequence version replaced NM_001098187.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: BC139858.1, GFIL01019053.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168447, SAMEA2168448 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAACATGT CAGAGAAGAA GGTCGGACGT CCAGGCATGA GCATCTTCAG TCCATGCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001091657.2 |
CDS | 351..1628 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001098187.2 |
1 | ATGAACATGT CAGAGAAGAA GGTCGGACGT CCAGGCATGA GCATCTTCAG TCCATGCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa45709 | |
Clone ID Related Accession (Same CDS sequence) | XM_021466731.1 | |
Accession Version | XM_021466731.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1242bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | serine protease hepsin isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007127.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCATCT TCAGTCCATG CCGGGTGGTC GCTGCAGTTT CTCTGATCTT GATTATTCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021322406.1 |
CDS | 408..1649 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021466731.1 |
1 | ATGAGCATCT TCAGTCCATG CCGGGTGGTC GCTGCAGTTT CTCTGATCTT GATTATTCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
Role of hepsin in factor VII activation in zebrafish. |
Hematopoietic gene expression profile in zebrafish kidney marrow. |