Gene Symbol | pcgf5b |
Entrez Gene ID | 692252 |
Full Name | polycomb group ring finger 5b |
Synonyms | pcgf5,zgc:136815 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » pcgf5b cDNA ORF clone
Gene Symbol | pcgf5b |
Entrez Gene ID | 692252 |
Full Name | polycomb group ring finger 5b |
Synonyms | pcgf5,zgc:136815 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_005156115.3 | XP_005156172.1 | polycomb group RING finger protein 5-B isoform X1 |
XM_005156115.4 | XP_005156172.1 | polycomb group RING finger protein 5-B isoform X1 |
XM_009306506.2 | XP_009304781.1 | polycomb group RING finger protein 5-B isoform X2 |
NM_001045235.1 | NP_001038700.1 | polycomb group RING finger protein 5-B |
Danio rerio (zebrafish) | pcgf5b | NP_001038700.1 |
LOC697020 | XP_002805794.1 | |
Bos taurus (cattle) | PCGF5 | NP_001071448.1 |
Danio rerio (zebrafish) | pcgf5a | NP_001122184.1 |
Canis lupus familiaris (dog) | PCGF5 | XP_005637589.1 |
Mus musculus (house mouse) | Pcgf5 | NP_083784.1 |
Gallus gallus (chicken) | PCGF5 | NP_001264290.1 |
Homo sapiens (human) | PCGF5 | NP_001243478.1 |
Pan troglodytes (chimpanzee) | PCGF5 | XP_003312724.1 |
Rattus norvegicus (Norway rat) | Pcgf5 | NP_001123354.1 |
Xenopus tropicalis (tropical clawed frog) | pcgf5 | XP_004915945.1 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
The Polycomb Group Protein Pcgf1 Is Dispensable in Zebrafish but Involved in Early Growth and Aging.
Dupret B, V?lkel P, Le Bourhis X, Angrand PO
PloS one11(7)e0158700(2016)
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following pcgf5b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the pcgf5b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa38320 | |
Clone ID Related Accession (Same CDS sequence) | NM_001045235.1 | |
Accession Version | NM_001045235.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 699bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-19 | |
Organism | Danio rerio(zebrafish) | |
Product | polycomb group RING finger protein 5-B | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC116619.1. ##Evidence-Data-START## Transcript exon combination :: BC116619.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476805, SAMN01765705 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGACATCAC ATAGGAAACA CCTGGTGAGG GACTTCAACC ATTTCATCAC CTGTTTTGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001038700.1 |
CDS | 298..996 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001045235.1 |
1 | ATGACATCAC ATAGGAAACA CCTGGTGAGG GACTTCAACC ATTTCATCAC CTGTTTTGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa17729 | |
Clone ID Related Accession (Same CDS sequence) | XM_005156115.3 , XM_005156115.4 | |
Accession Version | XM_005156115.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 498bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | polycomb group RING finger protein 5-B isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007123.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005156115.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTAAGGT TGGACAACAC TTTAGAGGAA GTGATATTTA AGCTCGTGCC TGGTCTCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005156172.1 |
CDS | 738..1235 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005156115.3 |
1 | ATGTTAAGGT TGGACAACAC TTTAGAGGAA GTGATATTTA AGCTCGTGCC TGGTCTCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa17729 | |
Clone ID Related Accession (Same CDS sequence) | XM_005156115.3 , XM_005156115.4 | |
Accession Version | XM_005156115.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 498bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | polycomb group RING finger protein 5-B isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007123.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005156115.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTAAGGT TGGACAACAC TTTAGAGGAA GTGATATTTA AGCTCGTGCC TGGTCTCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005156172.1 |
CDS | 645..1142 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005156115.4 |
1 | ATGTTAAGGT TGGACAACAC TTTAGAGGAA GTGATATTTA AGCTCGTGCC TGGTCTCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa46437 | |
Clone ID Related Accession (Same CDS sequence) | XM_009306506.2 | |
Accession Version | XM_009306506.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 372bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | polycomb group RING finger protein 5-B isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007123.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009306506.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGTAAGA AACGGCGTGT TGATGAAGAG GATGATGATA AAGGTGATGG AGACTATCAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_009304781.1 |
CDS | 117..488 |
Translation |
Target ORF information:
Target ORF information:
|
XM_009306506.2 |
1 | ATGTGTAAGA AACGGCGTGT TGATGAAGAG GATGATGATA AAGGTGATGG AGACTATCAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |
The Polycomb Group Protein Pcgf1 Is Dispensable in Zebrafish but Involved in Early Growth and Aging. |
RFX transcription factors are essential for hearing in mice. |