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pgghg cDNA ORF clone, Danio rerio(zebrafish)

Summary

Gene Symbol pgghg
Entrez Gene ID 777617
Full Name protein-glucosylgalactosylhydroxylysine glucosidase
Synonyms athl1,zgc:154078
General protein information
Preferred Names

protein-glucosylgalactosylhydroxylysine glucosidase

Names

protein-glucosylgalactosylhydroxylysine glucosidase
ATH1, acid trehalase-like 1
acid trehalase-like protein 1
Gene Type protein-coding
Organism Danio rerio(zebrafish)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_001077725.1 NP_001071193.1 protein-glucosylgalactosylhydroxylysine glucosidase

Pathways from BioSystems


Homologies


Pan troglodytes (chimpanzee) ATHL1 XP_001147777.2
Canis lupus familiaris (dog) ATHL1 XP_540514.2
ATHL1 XP_001085102.2
Rattus norvegicus (Norway rat) Athl1 XP_006230649.1
Danio rerio (zebrafish) athl1 NP_001071193.1
Anopheles gambiae (African malaria mosquito) AgaP_AGAP008548 XP_001237582.2
Drosophila melanogaster (fruit fly) CG16965 NP_609528.3
Homo sapiens (human) ATHL1 NP_079368.3
Mus musculus (house mouse) Athl1 NP_663362.2
Gallus gallus (chicken) ATHL1 XP_004941368.1
Xenopus tropicalis (tropical clawed frog) athl1 XP_002939378.2

Gene Ontology


Bibliography

Related articles in PubMed

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following pgghg gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the pgghg cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa38285 NM_001077725.1
Latest version!		 Danio rerio protein-glucosylgalactosylhydroxylysine glucosidase (pgghg), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $342.30
$489.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ODa38285
Clone ID Related Accession (Same CDS sequence) NM_001077725.1
Accession Version NM_001077725.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1968bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-24
Organism Danio rerio(zebrafish)
Product protein-glucosylgalactosylhydroxylysine glucosidase
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC125951.1. ##Evidence-Data-START## Transcript exon combination :: BC125951.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
ATGGGCGGGG TTTATAACGG TGATGGTGGG ACTTGTCACC GTGGCAACAT CCCATGTCCA 
CTGGCAGCAC AGATGAAGAC AGGAGAAGTC GGACGACAGT TATACGAGTT AAACATGCAC 
ACAGGTGTTT TCTCTCATAC TGTGGTCACG TCTGATTTTG AGGCCATTCA GGTTTTGTAT 
GCTCATCGAA ACCAATCAAA CCTGCTGGTC ATGGAGATTC TCCTCAAGCG CATTAAAACC 
AGTGCTGAAC CAATCACCAT TCAGCTGGAG AGCTCATTCA AACCCCAAAG TGAAGACATT 
GCTTTTCAAA ATGCACCAGA CTACAAGGGT GGAAGGCATA TATTTGGACA GACCGCCTCT 
TCTGAAGTTC CTGGAGGAGT ACGTCCAGTT GTACATCTGA TCTGGACGCC AGTCACACCC 
ACTCTCACAC TCCCGGCCAA TCAGAGCCAG TCCAGCTGGA CTTTCCTAGT TGCTGTTGCT 
AGGAGCAACG AAAGCGCCCA ATCATTTTAC GATTCTGGTT TAGCACTCAT TAATACTGGT 
GACTTACGCC CCTCCCACCA GAGGAGCTGG GCGGAGCTTT GGAAGGGGAG CAGTATTGAG 
GTGATAGGAG CTGAGAGTCT GAACCGTGCT CTGATTGGTT GCATGTTTTA CCTGCTCGGT 
TCATTTCCAT ATGTAAATAA AGAGGCGAGT GCTGCGTTTG AGTTTGGAGG AGTCAGTCCT 
GGAGGATTGT CCAATGGCAG TGAAGACGAG GATTATCATG GACATGTGTT CTGGGATCAG 
GACACATGGA TGTACCCCAG CATTGCCCTC TTTTATCCTG CTCTGGCCCG GGCTGTCCTG 
CAGTACCGTG TAGAAACACT AGAAGGAGCT CAAGTCAACG CTCAGCAGAT GGGCTGCAAG 
GGTTTGAAGT TTGCATGGGA GAGCGCAGTG ACAGGCGTCG ATGTTTGTCC AGAAGACGTT 
TACTCCCAGC AGGAGCTTCA CATCAATGGA GACGTGATTC TGGCCTTCCA GCAGTACTAT 
TATCTTACAC AGGACCTGGA GCTGTTTCAG TCTGGACGGG GCAGTGAGGT GGTGTGGGGC 
GTCGCTGATT TCTGGGTTTC ACGGGTGACA TGGGACTCTG CTGACCAACA GTACCACATT 
AAAGGTGTGA TTCCTCCTGA TGAATATTAC TTCACTGTGG ACAACTCAGT GTTCACTAAT 
GCCGTCGCTC AGCGCAGTCT TGAGTTTGCA GTGGAGCTTT CGGCTCTGTT AGCTGAGGTT 
CCTCCTCCCG CTTGGCAGGA CATCGCTGAC AAGATCAAAA TCCCCTTTGA CCCGGAGTTG 
AAGTTTCACC CGGAGTTTGA CGGATATAAG CCAGGCAATA AAGTGAAGCA GGCGGATGTG 
GTTTTGCTGG GTTTCCCGCT GGCCTTTCCC ATGAGCCCAG AGATCAGACG CAACGATCTG 
GAGATGTACG AGGCCGTCAC TGACCCGCTC GGACCCGCCA TGACCTGGGG CATGTTTGCT 
TTGGGCTGGC TTGAACTTGG AGAGGCAGAA AAAGCCCAAA AGCTTCTGCA GAAATGCTTC 
AAAAATGTGC AGAAACCATT TCAGGTCTGG AGTGAATCAG CTGACGGCTC TGGATGTGTG 
AACTTCCTGA CAGGGATGGG TGGATTCCTG CAGGCTGTAC TGTTCGGCTA CACAGGCTTC 
AGAGTGCAGA AGGAGCAGCT AGCCTTCTCT CCACTGCTGC CGCTGGATGT TTCTGCACTC 
AGTGTGAAGG GTGTTTGTTA TCTCGGCCAT AAGATGGACT GGACGATCAC AAGTGAAGAA 
GTAAAAGTTT CTGTGAGGAA GACTGACAGC AAAGAGACAT TCACTCTTCA AGTTGTGCTC 
AATTCTGGAT CTACCCTCCT GCTTACTCCA GGACAGTCTG TGAGCTTTCC TCGCCAGCCT 
GGTCACATCT GTCAACTAAA ATCCAGTTCT TCCTGCTGGC CCATCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001071193.1
CDS198..2165
Translation

Target ORF information:

RefSeq Version NM_001077725.1
Organism Danio rerio(zebrafish)
Definition Danio rerio protein-glucosylgalactosylhydroxylysine glucosidase (pgghg), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001077725.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
ATGGGCGGGG TTTATAACGG TGATGGTGGG ACTTGTCACC GTGGCAACAT CCCATGTCCA 
CTGGCAGCAC AGATGAAGAC AGGAGAAGTC GGACGACAGT TATACGAGTT AAACATGCAC 
ACAGGTGTTT TCTCTCATAC TGTGGTCACG TCTGATTTTG AGGCCATTCA GGTTTTGTAT 
GCTCATCGAA ACCAATCAAA CCTGCTGGTC ATGGAGATTC TCCTCAAGCG CATTAAAACC 
AGTGCTGAAC CAATCACCAT TCAGCTGGAG AGCTCATTCA AACCCCAAAG TGAAGACATT 
GCTTTTCAAA ATGCACCAGA CTACAAGGGT GGAAGGCATA TATTTGGACA GACCGCCTCT 
TCTGAAGTTC CTGGAGGAGT ACGTCCAGTT GTACATCTGA TCTGGACGCC AGTCACACCC 
ACTCTCACAC TCCCGGCCAA TCAGAGCCAG TCCAGCTGGA CTTTCCTAGT TGCTGTTGCT 
AGGAGCAACG AAAGCGCCCA ATCATTTTAC GATTCTGGTT TAGCACTCAT TAATACTGGT 
GACTTACGCC CCTCCCACCA GAGGAGCTGG GCGGAGCTTT GGAAGGGGAG CAGTATTGAG 
GTGATAGGAG CTGAGAGTCT GAACCGTGCT CTGATTGGTT GCATGTTTTA CCTGCTCGGT 
TCATTTCCAT ATGTAAATAA AGAGGCGAGT GCTGCGTTTG AGTTTGGAGG AGTCAGTCCT 
GGAGGATTGT CCAATGGCAG TGAAGACGAG GATTATCATG GACATGTGTT CTGGGATCAG 
GACACATGGA TGTACCCCAG CATTGCCCTC TTTTATCCTG CTCTGGCCCG GGCTGTCCTG 
CAGTACCGTG TAGAAACACT AGAAGGAGCT CAAGTCAACG CTCAGCAGAT GGGCTGCAAG 
GGTTTGAAGT TTGCATGGGA GAGCGCAGTG ACAGGCGTCG ATGTTTGTCC AGAAGACGTT 
TACTCCCAGC AGGAGCTTCA CATCAATGGA GACGTGATTC TGGCCTTCCA GCAGTACTAT 
TATCTTACAC AGGACCTGGA GCTGTTTCAG TCTGGACGGG GCAGTGAGGT GGTGTGGGGC 
GTCGCTGATT TCTGGGTTTC ACGGGTGACA TGGGACTCTG CTGACCAACA GTACCACATT 
AAAGGTGTGA TTCCTCCTGA TGAATATTAC TTCACTGTGG ACAACTCAGT GTTCACTAAT 
GCCGTCGCTC AGCGCAGTCT TGAGTTTGCA GTGGAGCTTT CGGCTCTGTT AGCTGAGGTT 
CCTCCTCCCG CTTGGCAGGA CATCGCTGAC AAGATCAAAA TCCCCTTTGA CCCGGAGTTG 
AAGTTTCACC CGGAGTTTGA CGGATATAAG CCAGGCAATA AAGTGAAGCA GGCGGATGTG 
GTTTTGCTGG GTTTCCCGCT GGCCTTTCCC ATGAGCCCAG AGATCAGACG CAACGATCTG 
GAGATGTACG AGGCCGTCAC TGACCCGCTC GGACCCGCCA TGACCTGGGG CATGTTTGCT 
TTGGGCTGGC TTGAACTTGG AGAGGCAGAA AAAGCCCAAA AGCTTCTGCA GAAATGCTTC 
AAAAATGTGC AGAAACCATT TCAGGTCTGG AGTGAATCAG CTGACGGCTC TGGATGTGTG 
AACTTCCTGA CAGGGATGGG TGGATTCCTG CAGGCTGTAC TGTTCGGCTA CACAGGCTTC 
AGAGTGCAGA AGGAGCAGCT AGCCTTCTCT CCACTGCTGC CGCTGGATGT TTCTGCACTC 
AGTGTGAAGG GTGTTTGTTA TCTCGGCCAT AAGATGGACT GGACGATCAC AAGTGAAGAA 
GTAAAAGTTT CTGTGAGGAA GACTGACAGC AAAGAGACAT TCACTCTTCA AGTTGTGCTC 
AATTCTGGAT CTACCCTCCT GCTTACTCCA GGACAGTCTG TGAGCTTTCC TCGCCAGCCT 
GGTCACATCT GTCAACTAAA ATCCAGTTCT TCCTGCTGGC CCATCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R