Gene Symbol | rnaset2 |
Entrez Gene ID | 791890 |
Full Name | ribonuclease T2 |
Synonyms | dre2,wu:fc10c06,zgc:113369 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » rnaset2 cDNA ORF clone
gRNAs
Gene Symbol | rnaset2 |
Entrez Gene ID | 791890 |
Full Name | ribonuclease T2 |
Synonyms | dre2,wu:fc10c06,zgc:113369 |
General protein information |
|
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_021480672.1 | XP_021336347.1 | ribonuclease T2 isoform X1 |
NM_001030064.2 | NP_001025235.2 | ribonuclease T2 precursor |
NM_001320391.1 | NP_001307320.1 | ribonuclease T2 precursor |
Homo sapiens (human) | RNASET2 | NP_003721.2 |
Bos taurus (cattle) | RNASET2 | NP_001193266.1 |
Drosophila melanogaster (fruit fly) | RNaseX25 | NP_523966.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP009842 | XP_318955.3 |
Caenorhabditis elegans (roundworm) | K10C9.3 | NP_503370.1 |
Mus musculus (house mouse) | Rnaset2a | NP_001077407.1 |
RNASET2 | XP_001101976.1 | |
Mus musculus (house mouse) | Rnaset2b | NP_080887.1 |
Oryza sativa (rice) | Os08g0434100 | NP_001061877.1 |
Gallus gallus (chicken) | RNASET2 | NP_001034580.1 |
Danio rerio (zebrafish) | rnaset2 | NP_001025235.1 |
Arabidopsis thaliana (thale cress) | RNS1 | NP_178399.1 |
Arabidopsis thaliana (thale cress) | RNS3 | NP_564264.1 |
Arabidopsis thaliana (thale cress) | AT1G14220 | NP_563941.1 |
Xenopus tropicalis (tropical clawed frog) | rnaset2 | NP_001072716.1 |
Pan troglodytes (chimpanzee) | RNASET2 | XP_001136814.1 |
Canis lupus familiaris (dog) | RNASET2 | XP_005615626.1 |
Rattus norvegicus (Norway rat) | Rnaset2 | NP_001099680.1 |
RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)
rnaset2 mutant zebrafish model familial cystic leukoencephalopathy and reveal a role for RNase T2 in degrading ribosomal RNA.
Haud N, Kara F, Diekmann S, Henneke M, Willer JR, Hillwig MS, Gregg RG, Macintosh GC, G?rtner J, Alia A, Hurlstone AF
Proceedings of the National Academy of Sciences of the United States of America108(3)1099-103(2011 Jan)
Zebrafish RNase T2 genes and the evolution of secretory ribonucleases in animals.
Hillwig MS, Rizhsky L, Wang Y, Umanskaya A, Essner JJ, MacIntosh GC
BMC evolutionary biology9170(2009 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following rnaset2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the rnaset2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa18489 | |
Clone ID Related Accession (Same CDS sequence) | XM_021480672.1 , NM_001030064.2 , NM_001320391.1 | |
Accession Version | NM_001030064.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 723bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-28 | |
Organism | Danio rerio(zebrafish) | |
Product | ribonuclease T2 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX255965.12. On Feb 23, 2016 this sequence version replaced NM_001030064.1. Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: DT862834.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAGATTCA TTGCATTTGC TGTCATCTTT AGTGCTGTAT ATCTTTGCTC ATCAGCCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001025235.2 |
CDS | 250..972 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGATTCA TTGCATTTGC TGTCATCTTT AGTGCTGTAT ATCTTTGCTC ATCAGCCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa18489 | |
Clone ID Related Accession (Same CDS sequence) | XM_021480672.1 , NM_001030064.2 , NM_001320391.1 | |
Accession Version | NM_001320391.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 723bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-28 | |
Organism | Danio rerio(zebrafish) | |
Product | ribonuclease T2 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EB859385.1, BX255965.12 and EB930108.1. On Feb 23, 2016 this sequence version replaced XM_005157081.2. Transcript Variant: This variant (2) lacks an alternate exon the 5' UTR compared to variant 1. Variants 1 and 2 encode the same protein. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: EL648461.1, FJ460212.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAGATTCA TTGCATTTGC TGTCATCTTT AGTGCTGTAT ATCTTTGCTC ATCAGCCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001307320.1 |
CDS | 229..951 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGATTCA TTGCATTTGC TGTCATCTTT AGTGCTGTAT ATCTTTGCTC ATCAGCCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa18489 | |
Clone ID Related Accession (Same CDS sequence) | XM_021480672.1 , NM_001030064.2 , NM_001320391.1 | |
Accession Version | XM_021480672.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 723bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | ribonuclease T2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGATTCA TTGCATTTGC TGTCATCTTT AGTGCTGTAT ATCTTTGCTC ATCAGCCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021336347.1 |
CDS | 269..991 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGATTCA TTGCATTTGC TGTCATCTTT AGTGCTGTAT ATCTTTGCTC ATCAGCCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RFX transcription factors are essential for hearing in mice. |
rnaset2 mutant zebrafish model familial cystic leukoencephalopathy and reveal a role for RNase T2 in degrading ribosomal RNA. |
Zebrafish RNase T2 genes and the evolution of secretory ribonucleases in animals. |