Gene Symbol |
SH2D1B |
Entrez Gene ID |
418411 |
Full Name |
SH2 domain containing 1B |
General protein information |
- Preferred Names
SH2 domain containing 1B
Names
SH2 domain-containing protein 1B
|
Gene Type |
protein-coding |
Organism |
Gallus gallus(chicken) |
mRNA and Protein(s)
mRNA |
Protein |
Name |
XM_025149329.1 |
XP_025005097.1 |
SH2 domain-containing protein 1B isoform X1 |
XM_025149335.1 |
XP_025005103.1 |
SH2 domain-containing protein 1B isoform X2 |
XM_025149334.1 |
XP_025005102.1 |
SH2 domain-containing protein 1B isoform X1 |
XM_015296239.1 |
XP_015151725.1 |
SH2 domain-containing protein 1B isoform X1 |
NM_001278073.1 |
NP_001265002.1 |
SH2 domain-containing protein 1B |
XM_015296239.2 |
XP_015151725.1 |
SH2 domain-containing protein 1B isoform X1 |
Homo sapiens (human) |
SH2D1B |
NP_444512.2 |
Pan troglodytes (chimpanzee) |
SH2D1B |
XP_003949678.1 |
Rattus norvegicus (Norway rat) |
Sh2d1b |
XP_577285.1 |
Canis lupus familiaris (dog) |
SH2D1B |
XP_005640915.1 |
Bos taurus (cattle) |
SH2D1B |
NP_001180091.1 |
Mus musculus (house mouse) |
Sh2d1b1 |
NP_036139.3 |
Danio rerio (zebrafish) |
si:dkey-11p10.10 |
NP_001189421.1 |
Xenopus tropicalis (tropical clawed frog) |
LOC100486929 |
XP_002932331.1 |
|
SH2D1B |
XP_001118174.1 |
Gallus gallus (chicken) |
SH2D1B |
NP_001265002.1 |
Related articles in PubMed
Chicken genomics resource: sequencing and annotation of 35,407 ESTs from single and multiple tissue cDNA libraries and CAP3 assembly of a chicken gene index.
Carre W, Wang X, Porter TE, Nys Y, Tang J, Bernberg E, Morgan R, Burnside J, Aggrey SE, Simon J, Cogburn LA
Physiological genomics25(3)514-24(2006 May)
A comprehensive collection of chicken cDNAs.
Boardman PE, Sanz-Ezquerro J, Overton IM, Burt DW, Bosch E, Fong WT, Tickle C, Brown WR, Wilson SA, Hubbard SJ
Current biology : CB12(22)1965-9(2002 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following SH2D1B gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SH2D1B cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OGa23659 |
Clone ID Related Accession (Same CDS sequence) |
XM_025149329.1
, XM_025149334.1
, XM_015296239.1
, NM_001278073.1
, XM_015296239.2
|
Accession Version |
NM_001278073.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 405bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-20 |
Organism |
Gallus gallus(chicken) |
Product |
SH2 domain-containing protein 1B |
Comment |
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BI393889.1 and BU233812.1. On May 9, 2013 this sequence version replaced XM_416626.3.
Sequence Note: This RefSeq record was created with transcript data from different strains to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments.
##Evidence-Data-START##
Transcript exon combination :: BI393889.1 [ECO:0000332]
##Evidence-Data-END##
|
1 61 121 181 241 301 361
| ATGGAGTTTC CATTTTTTCA TGGAAAGATA TCAAGAAAAG CATGTGAAGA TCTGCTGTGC AAGAAAGGAA AGAATGGTAG CTATTTAATA CGGGAGAGTG AAACCGTGGC TGGAGCCTTG TGTCTGTGTG TTCTCTTTGA AAAAGTCATC TACACTTACC GTATCTTCAG GGAATATGAA GGATGTTATA AAGTACAGAC TTCTGAAGGT GTTCCACAAA AGGTCTTCAA AACATTAAAG GATTTAATAT ATAACTATGA AAAGCCAAAC CAAGGGCTAG TAACAAAGCT TCGCTACCCA GTCAAGAAAA CAAGCTCCTC ACGAAGAAGC CAGAGGTTCA AGACAGGAAA TGATGACATT TACGATGAAA TTGATGAAAG TGATTATGTT GATGTCTTAT CTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001265002.1 |
CDS | 60..464 |
Translation | |
Target ORF information:
RefSeq Version | NM_001278073.1 |
Organism | Gallus gallus(chicken) |
Definition | Gallus gallus SH2 domain containing 1B (SH2D1B), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001278073.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361
| ATGGAGTTTC CATTTTTTCA TGGAAAGATA TCAAGAAAAG CATGTGAAGA TCTGCTGTGC AAGAAAGGAA AGAATGGTAG CTATTTAATA CGGGAGAGTG AAACCGTGGC TGGAGCCTTG TGTCTGTGTG TTCTCTTTGA AAAAGTCATC TACACTTACC GTATCTTCAG GGAATATGAA GGATGTTATA AAGTACAGAC TTCTGAAGGT GTTCCACAAA AGGTCTTCAA AACATTAAAG GATTTAATAT ATAACTATGA AAAGCCAAAC CAAGGGCTAG TAACAAAGCT TCGCTACCCA GTCAAGAAAA CAAGCTCCTC ACGAAGAAGC CAGAGGTTCA AGACAGGAAA TGATGACATT TACGATGAAA TTGATGAAAG TGATTATGTT GATGTCTTAT CTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OGa23659 |
Clone ID Related Accession (Same CDS sequence) |
XM_025149329.1
, XM_025149334.1
, XM_015296239.1
, NM_001278073.1
, XM_015296239.2
|
Accession Version |
XM_025149329.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 405bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-16 |
Organism |
Gallus gallus(chicken) |
Product |
SH2 domain-containing protein 1B isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006088.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Gallus gallus Annotation Release 104
Annotation Version :: 104
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361
| ATGGAGTTTC CATTTTTTCA TGGAAAGATA TCAAGAAAAG CATGTGAAGA TCTGCTGTGC AAGAAAGGAA AGAATGGTAG CTATTTAATA CGGGAGAGTG AAACCGTGGC TGGAGCCTTG TGTCTGTGTG TTCTCTTTGA AAAAGTCATC TACACTTACC GTATCTTCAG GGAATATGAA GGATGTTATA AAGTACAGAC TTCTGAAGGT GTTCCACAAA AGGTCTTCAA AACATTAAAG GATTTAATAT ATAACTATGA AAAGCCAAAC CAAGGGCTAG TAACAAAGCT TCGCTACCCA GTCAAGAAAA CAAGCTCCTC ACGAAGAAGC CAGAGGTTCA AGACAGGAAA TGATGACATT TACGATGAAA TTGATGAAAG TGATTATGTT GATGTCTTAT CTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_025005097.1 |
CDS | 3509..3913 |
Translation | |
Target ORF information:
RefSeq Version | XM_025149329.1 |
Organism | Gallus gallus(chicken) |
Definition | Gallus gallus SH2 domain containing 1B (SH2D1B), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_025149329.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361
| ATGGAGTTTC CATTTTTTCA TGGAAAGATA TCAAGAAAAG CATGTGAAGA TCTGCTGTGC AAGAAAGGAA AGAATGGTAG CTATTTAATA CGGGAGAGTG AAACCGTGGC TGGAGCCTTG TGTCTGTGTG TTCTCTTTGA AAAAGTCATC TACACTTACC GTATCTTCAG GGAATATGAA GGATGTTATA AAGTACAGAC TTCTGAAGGT GTTCCACAAA AGGTCTTCAA AACATTAAAG GATTTAATAT ATAACTATGA AAAGCCAAAC CAAGGGCTAG TAACAAAGCT TCGCTACCCA GTCAAGAAAA CAAGCTCCTC ACGAAGAAGC CAGAGGTTCA AGACAGGAAA TGATGACATT TACGATGAAA TTGATGAAAG TGATTATGTT GATGTCTTAT CTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OGa23659 |
Clone ID Related Accession (Same CDS sequence) |
XM_025149329.1
, XM_025149334.1
, XM_015296239.1
, NM_001278073.1
, XM_015296239.2
|
Accession Version |
XM_025149334.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 405bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-16 |
Organism |
Gallus gallus(chicken) |
Product |
SH2 domain-containing protein 1B isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006088.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Gallus gallus Annotation Release 104
Annotation Version :: 104
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361
| ATGGAGTTTC CATTTTTTCA TGGAAAGATA TCAAGAAAAG CATGTGAAGA TCTGCTGTGC AAGAAAGGAA AGAATGGTAG CTATTTAATA CGGGAGAGTG AAACCGTGGC TGGAGCCTTG TGTCTGTGTG TTCTCTTTGA AAAAGTCATC TACACTTACC GTATCTTCAG GGAATATGAA GGATGTTATA AAGTACAGAC TTCTGAAGGT GTTCCACAAA AGGTCTTCAA AACATTAAAG GATTTAATAT ATAACTATGA AAAGCCAAAC CAAGGGCTAG TAACAAAGCT TCGCTACCCA GTCAAGAAAA CAAGCTCCTC ACGAAGAAGC CAGAGGTTCA AGACAGGAAA TGATGACATT TACGATGAAA TTGATGAAAG TGATTATGTT GATGTCTTAT CTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_025005102.1 |
CDS | 291..695 |
Translation | |
Target ORF information:
RefSeq Version | XM_025149334.1 |
Organism | Gallus gallus(chicken) |
Definition | Gallus gallus SH2 domain containing 1B (SH2D1B), transcript variant X3, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_025149334.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361
| ATGGAGTTTC CATTTTTTCA TGGAAAGATA TCAAGAAAAG CATGTGAAGA TCTGCTGTGC AAGAAAGGAA AGAATGGTAG CTATTTAATA CGGGAGAGTG AAACCGTGGC TGGAGCCTTG TGTCTGTGTG TTCTCTTTGA AAAAGTCATC TACACTTACC GTATCTTCAG GGAATATGAA GGATGTTATA AAGTACAGAC TTCTGAAGGT GTTCCACAAA AGGTCTTCAA AACATTAAAG GATTTAATAT ATAACTATGA AAAGCCAAAC CAAGGGCTAG TAACAAAGCT TCGCTACCCA GTCAAGAAAA CAAGCTCCTC ACGAAGAAGC CAGAGGTTCA AGACAGGAAA TGATGACATT TACGATGAAA TTGATGAAAG TGATTATGTT GATGTCTTAT CTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OGa23659 |
Clone ID Related Accession (Same CDS sequence) |
XM_025149329.1
, XM_025149334.1
, XM_015296239.1
, NM_001278073.1
, XM_015296239.2
|
Accession Version |
XM_015296239.1 |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 405bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-01-03 |
Organism |
Gallus gallus(chicken) |
Product |
SH2 domain-containing protein 1B isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NT_455730.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Gallus gallus Annotation Release 103
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 6.5
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361
| ATGGAGTTTC CATTTTTTCA TGGAAAGATA TCAAGAAAAG CATGTGAAGA TCTGCTGTGC AAGAAAGGAA AGAATGGTAG CTATTTAATA CGGGAGAGTG AAACCGTGGC TGGAGCCTTG TGTCTGTGTG TTCTCTTTGA AAAAGTCATC TACACTTACC GTATCTTCAG GGAATATGAA GGATGTTATA AAGTACAGAC TTCTGAAGGT GTTCCACAAA AGGTCTTCAA AACATTAAAG GATTTAATAT ATAACTATGA AAAGCCAAAC CAAGGGCTAG TAACAAAGCT TCGCTACCCA GTCAAGAAAA CAAGCTCCTC ACGAAGAAGC CAGAGGTTCA AGACAGGAAA TGATGACATT TACGATGAAA TTGATGAAAG TGATTATGTT GATGTCTTAT CTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_015151725.1 |
CDS | 1757..2161 |
Translation | |
Target ORF information:
RefSeq Version | XM_015296239.1 |
Organism | Gallus gallus(chicken) |
Definition | Gallus gallus SH2 domain containing 1B (SH2D1B), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_015296239.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361
| ATGGAGTTTC CATTTTTTCA TGGAAAGATA TCAAGAAAAG CATGTGAAGA TCTGCTGTGC AAGAAAGGAA AGAATGGTAG CTATTTAATA CGGGAGAGTG AAACCGTGGC TGGAGCCTTG TGTCTGTGTG TTCTCTTTGA AAAAGTCATC TACACTTACC GTATCTTCAG GGAATATGAA GGATGTTATA AAGTACAGAC TTCTGAAGGT GTTCCACAAA AGGTCTTCAA AACATTAAAG GATTTAATAT ATAACTATGA AAAGCCAAAC CAAGGGCTAG TAACAAAGCT TCGCTACCCA GTCAAGAAAA CAAGCTCCTC ACGAAGAAGC CAGAGGTTCA AGACAGGAAA TGATGACATT TACGATGAAA TTGATGAAAG TGATTATGTT GATGTCTTAT CTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OGa23659 |
Clone ID Related Accession (Same CDS sequence) |
XM_025149329.1
, XM_025149334.1
, XM_015296239.1
, NM_001278073.1
, XM_015296239.2
|
Accession Version |
XM_015296239.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 405bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-16 |
Organism |
Gallus gallus(chicken) |
Product |
SH2 domain-containing protein 1B isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006088.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On May 17, 2018 this sequence version replaced XM_015296239.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Gallus gallus Annotation Release 104
Annotation Version :: 104
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361
| ATGGAGTTTC CATTTTTTCA TGGAAAGATA TCAAGAAAAG CATGTGAAGA TCTGCTGTGC AAGAAAGGAA AGAATGGTAG CTATTTAATA CGGGAGAGTG AAACCGTGGC TGGAGCCTTG TGTCTGTGTG TTCTCTTTGA AAAAGTCATC TACACTTACC GTATCTTCAG GGAATATGAA GGATGTTATA AAGTACAGAC TTCTGAAGGT GTTCCACAAA AGGTCTTCAA AACATTAAAG GATTTAATAT ATAACTATGA AAAGCCAAAC CAAGGGCTAG TAACAAAGCT TCGCTACCCA GTCAAGAAAA CAAGCTCCTC ACGAAGAAGC CAGAGGTTCA AGACAGGAAA TGATGACATT TACGATGAAA TTGATGAAAG TGATTATGTT GATGTCTTAT CTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_015151725.1 |
CDS | 2454..2858 |
Translation | |
Target ORF information:
RefSeq Version | XM_015296239.2 |
Organism | Gallus gallus(chicken) |
Definition | Gallus gallus SH2 domain containing 1B (SH2D1B), transcript variant X2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_015296239.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361
| ATGGAGTTTC CATTTTTTCA TGGAAAGATA TCAAGAAAAG CATGTGAAGA TCTGCTGTGC AAGAAAGGAA AGAATGGTAG CTATTTAATA CGGGAGAGTG AAACCGTGGC TGGAGCCTTG TGTCTGTGTG TTCTCTTTGA AAAAGTCATC TACACTTACC GTATCTTCAG GGAATATGAA GGATGTTATA AAGTACAGAC TTCTGAAGGT GTTCCACAAA AGGTCTTCAA AACATTAAAG GATTTAATAT ATAACTATGA AAAGCCAAAC CAAGGGCTAG TAACAAAGCT TCGCTACCCA GTCAAGAAAA CAAGCTCCTC ACGAAGAAGC CAGAGGTTCA AGACAGGAAA TGATGACATT TACGATGAAA TTGATGAAAG TGATTATGTT GATGTCTTAT CTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OGa142222 |
Clone ID Related Accession (Same CDS sequence) |
XM_025149335.1
|
Accession Version |
XM_025149335.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 405bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-05-16 |
Organism |
Gallus gallus(chicken) |
Product |
SH2 domain-containing protein 1B isoform X2 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006088.5) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Gallus gallus Annotation Release 104
Annotation Version :: 104
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361
| ATGGAGTTTC CATTTTTTCA TGGAAAGATA TCAAGAAAAG CATGTGAAGA TCTGCTGTGC AAGAAAGGAA AGAATGGTAG CTATTTAATA CGGGAGAGTG AAACCGTGGC TGGAGCCTTG TGTCTGTGTG TTCTTACAAT AGAAGACATT CCTAAAGACA GCCTTTCAGA ACATCACTTC ACACCAATGT TCTTGTTTCT ATACAACATG GTAATCTTGT GTCATATCCC AGCTTTGAAA AAGTCATCTA CACTTACCGT ATCTTCAGGG AATATGAAGG ATGTTATAAA GTACAGGAAA TCCCAAAGGG AAGAACGGAG AATTAGTCAG ACCTGCAGGG CCATGAGTGG GGTGGTTACA GACAGCAGCT ATTGGAATGA AGGAGGTAAC ATTTGTTCTT TCTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_025005103.1 |
CDS | 284..688 |
Translation | |
Target ORF information:
RefSeq Version | XM_025149335.1 |
Organism | Gallus gallus(chicken) |
Definition | Gallus gallus SH2 domain containing 1B (SH2D1B), transcript variant X4, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_025149335.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361
| ATGGAGTTTC CATTTTTTCA TGGAAAGATA TCAAGAAAAG CATGTGAAGA TCTGCTGTGC AAGAAAGGAA AGAATGGTAG CTATTTAATA CGGGAGAGTG AAACCGTGGC TGGAGCCTTG TGTCTGTGTG TTCTTACAAT AGAAGACATT CCTAAAGACA GCCTTTCAGA ACATCACTTC ACACCAATGT TCTTGTTTCT ATACAACATG GTAATCTTGT GTCATATCCC AGCTTTGAAA AAGTCATCTA CACTTACCGT ATCTTCAGGG AATATGAAGG ATGTTATAAA GTACAGGAAA TCCCAAAGGG AAGAACGGAG AATTAGTCAG ACCTGCAGGG CCATGAGTGG GGTGGTTACA GACAGCAGCT ATTGGAATGA AGGAGGTAAC ATTTGTTCTT TCTAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
Chicken genomics resource: sequencing and annotation of 35,407 ESTs from single and multiple tissue cDNA libraries and CAP3 assembly of a chicken gene index.
Physiological genomics25(3)514-24(2006 May)
Carre W,Wang X,Porter TE,Nys Y,Tang J,Bernberg E,Morgan R,Burnside J,Aggrey SE,Simon J,Cogburn LA |