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PCDHAC2 cDNA ORF clone, Gallus gallus(chicken)

Summary

Gene Symbol PCDHAC2
Entrez Gene ID 497224
Full Name protocadherin alpha subfamily C, 2
Synonyms CNRC02,PCHD
General protein information
Preferred Names

protocadherin alpha subfamily C, 2

Names

protocadherin alpha-C2
cadherin-related neuronal receptor c02
Gene Type protein-coding
Organism Gallus gallus(chicken)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_001111131.1 NP_001104601.1 protocadherin alpha-C2 precursor

Pathways from BioSystems


Homologies


Homo sapiens (human) PCDHAC2 NP_061722.1
Danio rerio (zebrafish) LOC101882651 XP_005157161.1
Pan troglodytes (chimpanzee) PCDHAC2 NP_001076061.1
Mus musculus (house mouse) Pcdhac2 NP_001003672.1
Gallus gallus (chicken) PCDHAC2 NP_001104601.1
PCDHAC2 XP_001089305.1
Rattus norvegicus (Norway rat) Pcdhac2 NP_958825.1
Danio rerio (zebrafish) pcdh2ac NP_001007763.1
Xenopus tropicalis (tropical clawed frog) pcdhac2 XP_004912839.1

Gene Ontology


Bibliography

Related articles in PubMed

Distinct genomic sequence of the CNR/Pcdhalpha genes in chicken.
Sugino H, Yanase H, Hamada S, Kurokawa K, Asakawa S, Shimizu N, Yagi T
Biochemical and biophysical research communications316(2)437-45(2004 Apr)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Complete genomic sequence and organization of the Gallus gallus protocadherin alpha gene
Title: Distinct genomic sequence of the CNR/Pcdhalpha genes in chicken.

The following PCDHAC2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PCDHAC2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OGa01136 NM_001111131.1
Latest version!		 Gallus gallus protocadherin alpha subfamily C, 2 (PCDHAC2), mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $510.30
$729.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OGa01136
Clone ID Related Accession (Same CDS sequence) NM_001111131.1
Accession Version NM_001111131.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2979bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2013-05-14
Organism Gallus gallus(chicken)
Product protocadherin alpha-C2 precursor
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY519500.1. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
ATGGCGGCGG CGGCTCGGCG GAGCCGCGGC GGGGCGGTGG CGCTGGGCCT GCCGCTGCTG 
CTAGTGCTGG GGCTGAGCAG CGGGCGGACG GCGGGCGGGC CGCTCCGCTA CTCGGTGCGG 
GAGGAGCTGC CGCACGGCGC CTTCGTGGGT AACGTGGCGA GCGACCTGGG CGTGGATCCG 
CGGCGACTGG CAGAGCGGGG AGCGCGGCTC ACGTCGGGCA GTGGCCGGCA GTACCTGGAG 
CTGGAACTGG GCCGTGGGGC ACTGCTGGTA CGGGAGCGTA TGGACCGAGA GGTGCTCTGT 
GAGCTGAGCC CCACCTGCTT CCTCAGCCTC GAGCTGGTCA TCGAGCAGCC CATCGAGGTG 
CACAACGTGG AGGTGGAAGT GCTGGACATC AATGACAACG CACCTCGCTT TCCCCGCCAG 
GATTACCGGT TGGAGATCAG TGAGTCTGCC GTTCCCGGGG CCCGCTTCCA CATTGAGAGT 
GCTCAGGACC CTGATGTGGG CACCAACTCT GTGCAGAGCT ACCAGCTGAG CCCCAGCCAC 
CACTTTGCCC TGGACCTTAA AGGCTTCCAG AGTGGCAGCA AGCTCCTGGA GCTTGTGCTG 
CAGCAGCCAC TGGACCGGGA GCAGAGTGCC CTGCTGCAGC TAGTGCTCAC TGCCGTGGAC 
GGTGGGGATC CTCCCAGGTC CGGCACAGCT CAGATCTCTG TGCGAGTTGT GGATACCAAT 
GACAACCCAC CTGCCTTTGA CCGCTCCACA TACACCGTGA ACCTGCTGGA GAACTCCCCC 
CCTGGCACGC TAGTTGTCAA ACTCAATGCT TCAGACCCCG ATGAGGGCTC CAATGGGGAT 
GTGATCTATT CTTTTGGCAG CTATACCCCA CAGAAGGTGA GGCAGCTCTT TCGTGTGGAT 
CCACATTCAG GGGAGGTACG GGTTAATGGC ACCTTGGATT ATGAAGAAGC ATCCTCTTAT 
GAGATCTATG TGCAAGCCAC TGATCAAGGC CCTGTCTCTA TGGCTGGGCA CTGCAAAGTA 
CTGGTCAACA TTGTGGATGC CAATGATAAT GTTCCTGAGG TGGTCCTGAC CTCCCTGTAC 
AGCCCAGTGC CAGAGGATGC AAAGCCAGGA ACTGTGGTGG CTTTGATGAG TGTCACAGAC 
CAGGACTCAG GACTGAACAA GCAGGTGAGC CTGCGTATTC CCCCTGGCCT CCCCTTTATG 
CTCAACTCTT TCAAGAATTC CTACACCTTG ATGACCCAAG GCAATCTGGA CCGTGAGAAA 
GCAGCAGCCT ACAACATCAC AGTTACAGCT ACTGACTCTG GGAGCCCCCC TCTCTACTCC 
CAGAAGGTGA TCCATGTGGT CATCTCTGAC ATCAATGACA ATCCTCCACT CTTCGAGGAA 
CCTGTGTACT CAGTTTACAT CCCTGAGAAC AACCCCCTTG GAGTTTTGCT TTGCACTATC 
AAAGCCACTG ACCCGGATGT TGCCGAAAAT GCCTACATAT CCTATTCTCT GTTGGATGGG 
GAGATTGAAG GGCTACCTGC CGCCTCCTTT GTTACCATTA AATCCGACAG CGGTGACATG 
TATGCTGTCA AATCCTTTGA CTATGAGACA CTAAGGGAGT TTCATGTTGT TGTCCAGGCT 
CAGGATGCTG GGATCCCATC ACTGAGCAGC ACTGTCACTG TCTACATCTA TGTGGTAGAC 
GTGAATGACC ATGCTCCAGA GATTCTGTAT CCTACCTCAA CCAACACTTC AGCAGCCCTG 
GAGATGATCC CACGCTCAGC TCATGCTGGA TATTTGGTAA CCAAGATTAT AGCCATTGAT 
GGGGACTCAG GACAAAATGC CTGGTTGTTC TACTACGTGG TGCAAACCTC AGATCCGGAT 
TTGTTCAGGA TAGAGCTCCA TACTGGGGAG ATTAGGACTA CTCGGAAACT GAGGGAGGAG 
GGCACACCTA CTTTCAACCT GACGGTGGAG GTGAGAGACA ATGGAGAGCC ACCGATGTCC 
TCGTCAGTAG CCATCACTGT TGCTGTGGTG GACAGAGTTT CCAAAATCAT CCCTGATACA 
AGAAGGCACA TTAGAAGTCC GAGCAATTAT TCAGAAATCA CTCTTTATCT CATCATTGCT 
TTGTGCTCCA TCTCCTTTGT TTTCCTTTTC ACAATCATTG GGCTTACTGT TATCAAGTGC 
TACAGATACA GTCTGTACGG GGACTCCTGC TGTACAGGTT TTTGTGGGGT CAGAGAACGG 
TGCCCTGCTG AATTGTACAA GCAGGCCAAC AATAACATCG ATGCAAGGTT GCCTCATGGT 
TTAAAAGTGC AGCCCCATTT CATTGAAGTG CGGGGCAATG GGTCTCTCAC TAAGACCTAC 
TGCTATAAGG CTTGCTTAAC TGCAGGATCG GGAAGTGACA CTTTTATGTT TTACAATACT 
TGTGGGCCAA CAGGAACGGT TCCCTCTGCA GTGGTGACTG AGAGGCATCT GACAGGACAG 
AGTGGGCAGA GTGCACAAAA CCTGATCATA CTTAAAAATG ACTCCATTAC TCCTAATGAG 
CCAAAACACC CCAATCCTGA CTGGCGCTAC TCCGCGTCCC TAAGGGCGGG AATGCAAAGG 
GTGCTGTGCA TATGGAGGAG GCAGGGATCT TACGTGGAGG ACCAGGAGGG CCTGACCAGC 
AGTGGCCAAC AGTCTCCAGT GCTACTCCAG CCTGAGGCAG GAGAGGTGTC CCCCCCGGTG 
GGAGCTGGTG TGAACAGCAA CAGCTGGACC TTTAAATTTG GACCCAGCAA TTCGAAACAA 
GGTGGTCCTG GTGAGTTGCC AGACAAATTC ATTATCCCAG GATCTCCTGC AATCATCTCC 
ATCCGGCAGG AGCCACCAAA CAGCCAAATT GACAAAAGTG ACTTCATAAC CTTTGGCAAG 
AAGGAAGAGA CCAAGAAAAA GAAGAAAAAG AAGAAGGGAA ACAAGACTCA GGAGAAAAAA 
GAAAAGGGCA ACAGCACCAC TGAGAACAGT GACCAGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001104601.1
CDS1..2979
Translation

Target ORF information:

RefSeq Version NM_001111131.1
Organism Gallus gallus(chicken)
Definition Gallus gallus protocadherin alpha subfamily C, 2 (PCDHAC2), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001111131.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
ATGGCGGCGG CGGCTCGGCG GAGCCGCGGC GGGGCGGTGG CGCTGGGCCT GCCGCTGCTG 
CTAGTGCTGG GGCTGAGCAG CGGGCGGACG GCGGGCGGGC CGCTCCGCTA CTCGGTGCGG 
GAGGAGCTGC CGCACGGCGC CTTCGTGGGT AACGTGGCGA GCGACCTGGG CGTGGATCCG 
CGGCGACTGG CAGAGCGGGG AGCGCGGCTC ACGTCGGGCA GTGGCCGGCA GTACCTGGAG 
CTGGAACTGG GCCGTGGGGC ACTGCTGGTA CGGGAGCGTA TGGACCGAGA GGTGCTCTGT 
GAGCTGAGCC CCACCTGCTT CCTCAGCCTC GAGCTGGTCA TCGAGCAGCC CATCGAGGTG 
CACAACGTGG AGGTGGAAGT GCTGGACATC AATGACAACG CACCTCGCTT TCCCCGCCAG 
GATTACCGGT TGGAGATCAG TGAGTCTGCC GTTCCCGGGG CCCGCTTCCA CATTGAGAGT 
GCTCAGGACC CTGATGTGGG CACCAACTCT GTGCAGAGCT ACCAGCTGAG CCCCAGCCAC 
CACTTTGCCC TGGACCTTAA AGGCTTCCAG AGTGGCAGCA AGCTCCTGGA GCTTGTGCTG 
CAGCAGCCAC TGGACCGGGA GCAGAGTGCC CTGCTGCAGC TAGTGCTCAC TGCCGTGGAC 
GGTGGGGATC CTCCCAGGTC CGGCACAGCT CAGATCTCTG TGCGAGTTGT GGATACCAAT 
GACAACCCAC CTGCCTTTGA CCGCTCCACA TACACCGTGA ACCTGCTGGA GAACTCCCCC 
CCTGGCACGC TAGTTGTCAA ACTCAATGCT TCAGACCCCG ATGAGGGCTC CAATGGGGAT 
GTGATCTATT CTTTTGGCAG CTATACCCCA CAGAAGGTGA GGCAGCTCTT TCGTGTGGAT 
CCACATTCAG GGGAGGTACG GGTTAATGGC ACCTTGGATT ATGAAGAAGC ATCCTCTTAT 
GAGATCTATG TGCAAGCCAC TGATCAAGGC CCTGTCTCTA TGGCTGGGCA CTGCAAAGTA 
CTGGTCAACA TTGTGGATGC CAATGATAAT GTTCCTGAGG TGGTCCTGAC CTCCCTGTAC 
AGCCCAGTGC CAGAGGATGC AAAGCCAGGA ACTGTGGTGG CTTTGATGAG TGTCACAGAC 
CAGGACTCAG GACTGAACAA GCAGGTGAGC CTGCGTATTC CCCCTGGCCT CCCCTTTATG 
CTCAACTCTT TCAAGAATTC CTACACCTTG ATGACCCAAG GCAATCTGGA CCGTGAGAAA 
GCAGCAGCCT ACAACATCAC AGTTACAGCT ACTGACTCTG GGAGCCCCCC TCTCTACTCC 
CAGAAGGTGA TCCATGTGGT CATCTCTGAC ATCAATGACA ATCCTCCACT CTTCGAGGAA 
CCTGTGTACT CAGTTTACAT CCCTGAGAAC AACCCCCTTG GAGTTTTGCT TTGCACTATC 
AAAGCCACTG ACCCGGATGT TGCCGAAAAT GCCTACATAT CCTATTCTCT GTTGGATGGG 
GAGATTGAAG GGCTACCTGC CGCCTCCTTT GTTACCATTA AATCCGACAG CGGTGACATG 
TATGCTGTCA AATCCTTTGA CTATGAGACA CTAAGGGAGT TTCATGTTGT TGTCCAGGCT 
CAGGATGCTG GGATCCCATC ACTGAGCAGC ACTGTCACTG TCTACATCTA TGTGGTAGAC 
GTGAATGACC ATGCTCCAGA GATTCTGTAT CCTACCTCAA CCAACACTTC AGCAGCCCTG 
GAGATGATCC CACGCTCAGC TCATGCTGGA TATTTGGTAA CCAAGATTAT AGCCATTGAT 
GGGGACTCAG GACAAAATGC CTGGTTGTTC TACTACGTGG TGCAAACCTC AGATCCGGAT 
TTGTTCAGGA TAGAGCTCCA TACTGGGGAG ATTAGGACTA CTCGGAAACT GAGGGAGGAG 
GGCACACCTA CTTTCAACCT GACGGTGGAG GTGAGAGACA ATGGAGAGCC ACCGATGTCC 
TCGTCAGTAG CCATCACTGT TGCTGTGGTG GACAGAGTTT CCAAAATCAT CCCTGATACA 
AGAAGGCACA TTAGAAGTCC GAGCAATTAT TCAGAAATCA CTCTTTATCT CATCATTGCT 
TTGTGCTCCA TCTCCTTTGT TTTCCTTTTC ACAATCATTG GGCTTACTGT TATCAAGTGC 
TACAGATACA GTCTGTACGG GGACTCCTGC TGTACAGGTT TTTGTGGGGT CAGAGAACGG 
TGCCCTGCTG AATTGTACAA GCAGGCCAAC AATAACATCG ATGCAAGGTT GCCTCATGGT 
TTAAAAGTGC AGCCCCATTT CATTGAAGTG CGGGGCAATG GGTCTCTCAC TAAGACCTAC 
TGCTATAAGG CTTGCTTAAC TGCAGGATCG GGAAGTGACA CTTTTATGTT TTACAATACT 
TGTGGGCCAA CAGGAACGGT TCCCTCTGCA GTGGTGACTG AGAGGCATCT GACAGGACAG 
AGTGGGCAGA GTGCACAAAA CCTGATCATA CTTAAAAATG ACTCCATTAC TCCTAATGAG 
CCAAAACACC CCAATCCTGA CTGGCGCTAC TCCGCGTCCC TAAGGGCGGG AATGCAAAGG 
GTGCTGTGCA TATGGAGGAG GCAGGGATCT TACGTGGAGG ACCAGGAGGG CCTGACCAGC 
AGTGGCCAAC AGTCTCCAGT GCTACTCCAG CCTGAGGCAG GAGAGGTGTC CCCCCCGGTG 
GGAGCTGGTG TGAACAGCAA CAGCTGGACC TTTAAATTTG GACCCAGCAA TTCGAAACAA 
GGTGGTCCTG GTGAGTTGCC AGACAAATTC ATTATCCCAG GATCTCCTGC AATCATCTCC 
ATCCGGCAGG AGCCACCAAA CAGCCAAATT GACAAAAGTG ACTTCATAAC CTTTGGCAAG 
AAGGAAGAGA CCAAGAAAAA GAAGAAAAAG AAGAAGGGAA ACAAGACTCA GGAGAAAAAA 
GAAAAGGGCA ACAGCACCAC TGAGAACAGT GACCAGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Distinct genomic sequence of the CNR/Pcdhalpha genes in chicken.
Biochemical and biophysical research communications316(2)437-45(2004 Apr)
Sugino H,Yanase H,Hamada S,Kurokawa K,Asakawa S,Shimizu N,Yagi T