Gene Symbol | USPL1 |
Entrez Gene ID | 10208 |
Full Name | ubiquitin specific peptidase like 1 |
Synonyms | C13orf22,D13S106E,bA121O19.1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome | |
Disorder MIM: |
ORF » Species Summary » Homo sapiens » USPL1 cDNA ORF clone
Gene Symbol | USPL1 |
Entrez Gene ID | 10208 |
Full Name | ubiquitin specific peptidase like 1 |
Synonyms | C13orf22,D13S106E,bA121O19.1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome | |
Disorder MIM: |
mRNA | Protein | Name |
---|---|---|
NM_005800.4 | NP_005791.3 | SUMO-specific isopeptidase USPL1 isoform 1 |
NM_001321532.1 | NP_001308461.1 | SUMO-specific isopeptidase USPL1 isoform 2 |
NM_001321534.1 | NP_001308463.1 | SUMO-specific isopeptidase USPL1 isoform 3 |
NM_001321534.2 | NP_001308463.1 | SUMO-specific isopeptidase USPL1 isoform 3 |
NM_005800.5 | NP_005791.3 | SUMO-specific isopeptidase USPL1 isoform 1 |
NM_001321533.1 | NP_001308462.1 | SUMO-specific isopeptidase USPL1 isoform 3 |
NM_001321533.2 | NP_001308462.1 | SUMO-specific isopeptidase USPL1 isoform 3 |
XM_017020314.1 | XP_016875803.1 | SUMO-specific isopeptidase USPL1 isoform X3 |
XM_017020316.1 | XP_016875805.1 | SUMO-specific isopeptidase USPL1 isoform X5 |
XM_005266213.2 | XP_005266270.1 | SUMO-specific isopeptidase USPL1 isoform X1 |
NM_001321532.2 | NP_001308461.1 | SUMO-specific isopeptidase USPL1 isoform 2 |
XM_017020314.2 | XP_016875803.1 | SUMO-specific isopeptidase USPL1 isoform X2 |
XM_006719751.3 | XP_006719814.1 | SUMO-specific isopeptidase USPL1 isoform X2 |
XM_005266213.3 | XP_005266270.1 | SUMO-specific isopeptidase USPL1 isoform X1 |
XM_017020315.1 | XP_016875804.1 | SUMO-specific isopeptidase USPL1 isoform X3 |
XM_006719751.4 | XP_006719814.1 | SUMO-specific isopeptidase USPL1 isoform X1 |
Gallus gallus (chicken) | USPL1 | NP_001155865.1 |
LOC721890 | XP_001118085.1 | |
Rattus norvegicus (Norway rat) | Uspl1 | NP_001185484.1 |
Canis lupus familiaris (dog) | USPL1 | XP_543145.2 |
Homo sapiens (human) | USPL1 | NP_005791.3 |
Bos taurus (cattle) | USPL1 | XP_002691857.1 |
Pan troglodytes (chimpanzee) | USPL1 | XP_522652.3 |
Mus musculus (house mouse) | Uspl1 | NP_001108621.1 |
A role for the Cajal-body-associated SUMO isopeptidase USPL1 in snRNA transcription mediated by RNA polymerase II.
Hutten S, Chachami G, Winter U, Melchior F, Lamond AI
Journal of cell science127(Pt 5)1065-78(2014 Mar)
Exploring the association between genetic variation in the SUMO isopeptidase gene USPL1 and breast cancer through integration of data from the population-based GENICA study and external genetic databases.
Bermejo JL, Kabisch M, D?nnebier T, Schnaidt S, Melchior F, Fischer HP, Harth V, Rabstein S, Pesch B, Br?ning T, Justenhoven C, Brauch H, Baisch C, Ko YD, Hamann U
International journal of cancer133(2)362-72(2013 Jul)
Ubiquitin-specific protease-like 1 (USPL1) is a SUMO isopeptidase with essential, non-catalytic functions.
Schulz S, Chachami G, Kozaczkiewicz L, Winter U, Stankovic-Valentin N, Haas P, Hofmann K, Urlaub H, Ovaa H, Wittbrodt J, Meulmeester E, Melchior F
EMBO reports13(10)930-8(2012 Oct)
Comparison of tear protein levels in breast cancer patients and healthy controls using a de novo proteomic approach.
B?hm D, Keller K, Pieter J, Boehm N, Wolters D, Siggelkow W, Lebrecht A, Schmidt M, K?lbl H, Pfeiffer N, Grus FH
Oncology reports28(2)429-38(2012 Aug)
Toward an understanding of the protein interaction network of the human liver.
Wang J, Huo K, Ma L, Tang L, Li D, Huang X, Yuan Y, Li C, Wang W, Guan W, Chen H, Jin C, Wei J, Zhang W, Yang Y, Liu Q, Zhou Y, Zhang C, Wu Z, Xu W, Zhang Y, Liu T, Yu D, Zhang Y, Chen L, Zhu D, Zhong X, Kang L, Gan X, Yu X, Ma Q, Yan J, Zhou L, Liu Z, Zhu Y, Zhou T, He F, Yang X
Molecular systems biology7536(2011 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
USPL1 plays a key role in RNAPII-mediated snRNA transcription.
Title: A role for the Cajal-body-associated SUMO isopeptidase USPL1 in snRNA transcription mediated by RNA polymerase II.
genetic variability in USPL1 may have a role in breast cancer, especially in rs7984952
Title: Exploring the association between genetic variation in the SUMO isopeptidase gene USPL1 and breast cancer through integration of data from the population-based GENICA study and external genetic databases.
The following USPL1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the USPL1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu11453 | |
Clone ID Related Accession (Same CDS sequence) | NM_005800.4 , NM_005800.5 , XM_005266213.2 , XM_005266213.3 | |
Accession Version | NM_005800.4 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3279bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-12-26 | |
Organism | Homo sapiens(human) | |
Product | SUMO-specific isopeptidase USPL1 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BI752017.1, X59131.1, BC036027.1 and AK289826.1. On Mar 29, 2008 this sequence version replaced NM_005800.3. ##Evidence-Data-START## Transcript exon combination :: BC038103.2, BC036027.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGATGGATT CTCCGAAGAT TGGAAATGGT TTGCCAGTGA TTGGACCAGG GACTGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_005791.3 |
CDS | 433..3711 |
Translation |
Target ORF information:
Target ORF information:
|
NM_005800.4 |
1 | ATGATGGATT CTCCGAAGAT TGGAAATGGT TTGCCAGTGA TTGGACCAGG GACTGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu11453 | |
Clone ID Related Accession (Same CDS sequence) | NM_005800.4 , NM_005800.5 , XM_005266213.2 , XM_005266213.3 | |
Accession Version | NM_005800.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3279bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-01 | |
Organism | Homo sapiens(human) | |
Product | SUMO-specific isopeptidase USPL1 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BI752017.1, X59131.1, BC036027.1, AK289826.1 and AL138681.17. On Nov 22, 2018 this sequence version replaced NM_005800.4. ##Evidence-Data-START## Transcript exon combination :: SRR1660807.175383.1, SRR1803615.158261.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000255304.9/ ENSP00000255304.4 RefSeq Select criteria :: based on conservation, expression, longest protein ##RefSeq-Attributes-END## COMPLETENESS: full length. |
1 | ATGATGGATT CTCCGAAGAT TGGAAATGGT TTGCCAGTGA TTGGACCAGG GACTGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_005791.3 |
CDS | 206..3484 |
Translation |
Target ORF information:
Target ORF information:
|
NM_005800.5 |
1 | ATGATGGATT CTCCGAAGAT TGGAAATGGT TTGCCAGTGA TTGGACCAGG GACTGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu11453 | |
Clone ID Related Accession (Same CDS sequence) | NM_005800.4 , NM_005800.5 , XM_005266213.2 , XM_005266213.3 | |
Accession Version | XM_005266213.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3279bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-03-11 | |
Organism | Homo sapiens(Human) | |
Product | SUMO-specific isopeptidase USPL1 isoform X1 | |
Comment |
1 | ATGATGGATT CTCCGAAGAT TGGAAATGGT TTGCCAGTGA TTGGACCAGG GACTGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005266270.1 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005266213.2 |
1 | ATGATGGATT CTCCGAAGAT TGGAAATGGT TTGCCAGTGA TTGGACCAGG GACTGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu11453 | |
Clone ID Related Accession (Same CDS sequence) | NM_005800.4 , NM_005800.5 , XM_005266213.2 , XM_005266213.3 | |
Accession Version | XM_005266213.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3279bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | SUMO-specific isopeptidase USPL1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000013.11) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_005266213.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGGATT CTCCGAAGAT TGGAAATGGT TTGCCAGTGA TTGGACCAGG GACTGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005266270.1 |
CDS | 791..4069 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005266213.3 |
1 | ATGATGGATT CTCCGAAGAT TGGAAATGGT TTGCCAGTGA TTGGACCAGG GACTGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu47057 | |
Clone ID Related Accession (Same CDS sequence) | NM_001321532.1 , XM_017020316.1 , NM_001321532.2 | |
Accession Version | NM_001321532.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2736bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-12-04 | |
Organism | Homo sapiens(human) | |
Product | SUMO-specific isopeptidase USPL1 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DB288223.1, X59131.1, BC036027.1, AK289826.1, CR627370.1 and AL138681.17. On Mar 26, 2016 this sequence version replaced XM_005266214.2. ##Evidence-Data-START## Transcript exon combination :: SRR1803612.38254.1, SRR1803614.212415.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTACTA CAAAAGATCC TGCTACAGTT GATGTCTCTG GAACTGGCAG ACCTTCCCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001308461.1 |
CDS | 823..3558 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001321532.1 |
1 | ATGGCTACTA CAAAAGATCC TGCTACAGTT GATGTCTCTG GAACTGGCAG ACCTTCCCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu47057 | |
Clone ID Related Accession (Same CDS sequence) | NM_001321532.1 , XM_017020316.1 , NM_001321532.2 | |
Accession Version | NM_001321532.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2736bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-30 | |
Organism | Homo sapiens(human) | |
Product | SUMO-specific isopeptidase USPL1 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DB288223.1, X59131.1, BC036027.1, AK289826.1, CR627370.1 and AL138681.17. On May 31, 2019 this sequence version replaced NM_001321532.1. ##Evidence-Data-START## Transcript exon combination :: SRR1803613.132197.1, SRR1803616.161044.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTACTA CAAAAGATCC TGCTACAGTT GATGTCTCTG GAACTGGCAG ACCTTCCCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001308461.1 |
CDS | 582..3317 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001321532.2 |
1 | ATGGCTACTA CAAAAGATCC TGCTACAGTT GATGTCTCTG GAACTGGCAG ACCTTCCCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu47057 | |
Clone ID Related Accession (Same CDS sequence) | NM_001321532.1 , XM_017020316.1 , NM_001321532.2 | |
Accession Version | XM_017020316.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2736bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | SUMO-specific isopeptidase USPL1 isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000013.11) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTACTA CAAAAGATCC TGCTACAGTT GATGTCTCTG GAACTGGCAG ACCTTCCCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016875805.1 |
CDS | 1167..3902 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017020316.1 |
1 | ATGGCTACTA CAAAAGATCC TGCTACAGTT GATGTCTCTG GAACTGGCAG ACCTTCCCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu101945 | |
Clone ID Related Accession (Same CDS sequence) | NM_001321534.1 , NM_001321534.2 , NM_001321533.1 , NM_001321533.2 | |
Accession Version | NM_001321534.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2292bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-30 | |
Organism | Homo sapiens(human) | |
Product | SUMO-specific isopeptidase USPL1 isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK057514.1, CR627370.1 and AL138681.17. ##Evidence-Data-START## Transcript exon combination :: AK057514.1, ERR279852.164.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968968, SAMEA2148093 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAAAGCC CTGTGTTTGC ATTTCCCCTG CTCTTAAAAC TAGAAACCCA CATTGAAAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001308463.1 |
CDS | 356..2647 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001321534.1 |
1 | ATGGAAAGCC CTGTGTTTGC ATTTCCCCTG CTCTTAAAAC TAGAAACCCA CATTGAAAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu101945 | |
Clone ID Related Accession (Same CDS sequence) | NM_001321534.1 , NM_001321534.2 , NM_001321533.1 , NM_001321533.2 | |
Accession Version | NM_001321534.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2292bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-30 | |
Organism | Homo sapiens(human) | |
Product | SUMO-specific isopeptidase USPL1 isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK057514.1, CR627370.1 and AL138681.17. On May 31, 2019 this sequence version replaced NM_001321534.1. ##Evidence-Data-START## Transcript exon combination :: AK057514.1, ERR279852.164.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968968, SAMEA2148093 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAAAGCC CTGTGTTTGC ATTTCCCCTG CTCTTAAAAC TAGAAACCCA CATTGAAAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001308463.1 |
CDS | 320..2611 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001321534.2 |
1 | ATGGAAAGCC CTGTGTTTGC ATTTCCCCTG CTCTTAAAAC TAGAAACCCA CATTGAAAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu101945 | |
Clone ID Related Accession (Same CDS sequence) | NM_001321534.1 , NM_001321534.2 , NM_001321533.1 , NM_001321533.2 | |
Accession Version | NM_001321533.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2292bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-30 | |
Organism | Homo sapiens(human) | |
Product | SUMO-specific isopeptidase USPL1 isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DB288223.1, CR627370.1 and AL138681.17. ##Evidence-Data-START## Transcript exon combination :: CR627370.1, SRR1660805.46788.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1968189 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAAAGCC CTGTGTTTGC ATTTCCCCTG CTCTTAAAAC TAGAAACCCA CATTGAAAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001308462.1 |
CDS | 627..2918 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001321533.1 |
1 | ATGGAAAGCC CTGTGTTTGC ATTTCCCCTG CTCTTAAAAC TAGAAACCCA CATTGAAAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu101945 | |
Clone ID Related Accession (Same CDS sequence) | NM_001321534.1 , NM_001321534.2 , NM_001321533.1 , NM_001321533.2 | |
Accession Version | NM_001321533.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2292bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-30 | |
Organism | Homo sapiens(human) | |
Product | SUMO-specific isopeptidase USPL1 isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DB288223.1, CR627370.1 and AL138681.17. On May 31, 2019 this sequence version replaced NM_001321533.1. ##Evidence-Data-START## Transcript exon combination :: SRR1803611.243774.1, CR627370.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1968189 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAAAGCC CTGTGTTTGC ATTTCCCCTG CTCTTAAAAC TAGAAACCCA CATTGAAAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001308462.1 |
CDS | 386..2677 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001321533.2 |
1 | ATGGAAAGCC CTGTGTTTGC ATTTCCCCTG CTCTTAAAAC TAGAAACCCA CATTGAAAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu84387 | |
Clone ID Related Accession (Same CDS sequence) | XM_017020315.1 | |
Accession Version | XM_017020315.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2622bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | SUMO-specific isopeptidase USPL1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000013.11) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTACTA CAAAAGATCC TGCTACAGTT GATGTCTCTG GAACTGGCAG ACCTTCCCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016875804.1 |
CDS | 643..3264 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017020315.1 |
1 | ATGGCTACTA CAAAAGATCC TGCTACAGTT GATGTCTCTG GAACTGGCAG ACCTTCCCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu84386 | |
Clone ID Related Accession (Same CDS sequence) | XM_017020314.1 , XM_017020314.2 | |
Accession Version | XM_017020314.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3165bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | SUMO-specific isopeptidase USPL1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000013.11) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGGATT CTCCGAAGAT TGGAAATGGT TTGCCAGTGA TTGGACCAGG GACTGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016875803.1 |
CDS | 729..3893 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017020314.1 |
1 | ATGATGGATT CTCCGAAGAT TGGAAATGGT TTGCCAGTGA TTGGACCAGG GACTGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu84386 | |
Clone ID Related Accession (Same CDS sequence) | XM_017020314.1 , XM_017020314.2 | |
Accession Version | XM_017020314.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3165bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | SUMO-specific isopeptidase USPL1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000013.11) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 26, 2018 this sequence version replaced XM_017020314.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGGATT CTCCGAAGAT TGGAAATGGT TTGCCAGTGA TTGGACCAGG GACTGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016875803.1 |
CDS | 238..3402 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017020314.2 |
1 | ATGATGGATT CTCCGAAGAT TGGAAATGGT TTGCCAGTGA TTGGACCAGG GACTGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu47056 | |
Clone ID Related Accession (Same CDS sequence) | XM_006719751.3 , XM_006719751.4 | |
Accession Version | XM_006719751.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3261bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | SUMO-specific isopeptidase USPL1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000013.11) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_006719751.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGGATT CTCCGAAGAT TGGAAATGGT TTGCCAGTGA TTGGACCAGG GACTGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006719814.1 |
CDS | 729..3989 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006719751.3 |
1 | ATGATGGATT CTCCGAAGAT TGGAAATGGT TTGCCAGTGA TTGGACCAGG GACTGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu47056 | |
Clone ID Related Accession (Same CDS sequence) | XM_006719751.3 , XM_006719751.4 | |
Accession Version | XM_006719751.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3261bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | SUMO-specific isopeptidase USPL1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000013.11) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 26, 2018 this sequence version replaced XM_006719751.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGGATT CTCCGAAGAT TGGAAATGGT TTGCCAGTGA TTGGACCAGG GACTGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006719814.1 |
CDS | 147..3407 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006719751.4 |
1 | ATGATGGATT CTCCGAAGAT TGGAAATGGT TTGCCAGTGA TTGGACCAGG GACTGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A role for the Cajal-body-associated SUMO isopeptidase USPL1 in snRNA transcription mediated by RNA polymerase II. |
Exploring the association between genetic variation in the SUMO isopeptidase gene USPL1 and breast cancer through integration of data from the population-based GENICA study and external genetic databases. |
Ubiquitin-specific protease-like 1 (USPL1) is a SUMO isopeptidase with essential, non-catalytic functions. |
Comparison of tear protein levels in breast cancer patients and healthy controls using a de novo proteomic approach. |
Toward an understanding of the protein interaction network of the human liver. |