Gene Symbol | TATDN3 |
Entrez Gene ID | 128387 |
Full Name | TatD DNase domain containing 3 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
ORF » Species Summary » Homo sapiens » TATDN3 cDNA ORF clone
Gene Symbol | TATDN3 |
Entrez Gene ID | 128387 |
Full Name | TatD DNase domain containing 3 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_017000331.1 | XP_016855820.1 | putative deoxyribonuclease TATDN3 isoform X5 |
NM_001042553.2 | NP_001036018.1 | putative deoxyribonuclease TATDN3 isoform 2 |
XM_017000330.1 | XP_016855819.1 | putative deoxyribonuclease TATDN3 isoform X3 |
XM_011509202.2 | XP_011507504.1 | putative deoxyribonuclease TATDN3 isoform X4 |
NM_001042552.2 | NP_001036017.1 | putative deoxyribonuclease TATDN3 isoform 1 |
NM_001042552.3 | NP_001036017.1 | putative deoxyribonuclease TATDN3 isoform 1 |
NM_001146169.1 | NP_001139641.1 | putative deoxyribonuclease TATDN3 isoform 3 |
NM_001363590.1 | NP_001350519.1 | putative deoxyribonuclease TATDN3 isoform 7 |
XM_017000329.1 | XP_016855818.1 | putative deoxyribonuclease TATDN3 isoform X2 |
NM_001146169.2 | NP_001139641.1 | putative deoxyribonuclease TATDN3 isoform 3 |
NM_001146170.1 | NP_001139642.1 | putative deoxyribonuclease TATDN3 isoform 4 |
NM_001146171.1 | NP_001139643.1 | putative deoxyribonuclease TATDN3 isoform 5 |
XM_017000330.2 | XP_016855819.1 | putative deoxyribonuclease TATDN3 isoform X3 |
XM_017000328.1 | XP_016855817.1 | putative deoxyribonuclease TATDN3 isoform X1 |
NM_001363589.1 | NP_001350518.1 | putative deoxyribonuclease TATDN3 isoform 6 |
XM_017000328.2 | XP_016855817.1 | putative deoxyribonuclease TATDN3 isoform X1 |
XM_024453283.1 | XP_024309051.1 | putative deoxyribonuclease TATDN3 isoform X4 |
Bos taurus (cattle) | TATDN3 | NP_001073789.1 |
Caenorhabditis elegans (roundworm) | B0432.8 | NP_493691.2 |
Homo sapiens (human) | TATDN3 | NP_001036017.1 |
Pan troglodytes (chimpanzee) | TATDN3 | XP_001170542.1 |
Gallus gallus (chicken) | TATDN3 | XP_419426.4 |
Canis lupus familiaris (dog) | TATDN3 | XP_547404.3 |
Mus musculus (house mouse) | Tatdn3 | NP_081171.1 |
Danio rerio (zebrafish) | LOC571912 | NP_001186951.1 |
Arabidopsis thaliana (thale cress) | AT3G03500 | NP_187000.1 |
Rattus norvegicus (Norway rat) | Tatdn3 | NP_001099457.1 |
Xenopus tropicalis (tropical clawed frog) | tatdn3 | XP_002934746.2 |
Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression.
Hendrickson SL, Lautenberger JA, Chinn LW, Malasky M, Sezgin E, Kingsley LA, Goedert JJ, Kirk GD, Gomperts ED, Buchbinder SP, Troyer JL, O'Brien SJ
PloS one5(9)e12862(2010 Sep)
Identification of intrahepatic cholangiocarcinoma related genes by comparison with normal liver tissues using expressed sequence tags.
Wang AG, Yoon SY, Oh JH, Jeon YJ, Kim M, Kim JM, Byun SS, Yang JO, Kim JH, Kim DG, Yeom YI, Yoo HS, Kim YS, Kim NS
Biochemical and biophysical research communications345(3)1022-32(2006 Jul)
NotI flanking sequences: a tool for gene discovery and verification of the human genome.
Kutsenko AS, Gizatullin RZ, Al-Amin AN, Wang F, Kvasha SM, Podowski RM, Matushkin YG, Gyanchandani A, Muravenko OV, Levitsky VG, Kolchanov NA, Protopopov AI, Kashuba VI, Kisselev LL, Wasserman W, Wahlestedt C, Zabarovsky ER
Nucleic acids research30(14)3163-70(2002 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Observational study of gene-disease association. (HuGE Navigator)
Title: Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression.
The following TATDN3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TATDN3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu12496 | |
Clone ID Related Accession (Same CDS sequence) | NM_001042552.2 , NM_001042552.3 | |
Accession Version | NM_001042552.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 825bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-01 | |
Organism | Homo sapiens(human) | |
Product | putative deoxyribonuclease TATDN3 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK293129.1, BC113638.1, AC104333.2 and DB351940.1. On Apr 1, 2009 this sequence version replaced NM_001042552.1. Transcript Variant: This variant (1) encodes isoform 1. ##Evidence-Data-START## Transcript exon combination :: SRR1660809.49027.1, SRR1660805.32223.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001036017.1 |
CDS | 95..919 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001042552.2 |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu12496 | |
Clone ID Related Accession (Same CDS sequence) | NM_001042552.2 , NM_001042552.3 | |
Accession Version | NM_001042552.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 825bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-07-05 | |
Organism | Homo sapiens(human) | |
Product | putative deoxyribonuclease TATDN3 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC113638.1, AC104333.2 and DB351940.1. On Nov 23, 2018 this sequence version replaced NM_001042552.2. Transcript Variant: This variant (1) encodes isoform 1. ##Evidence-Data-START## Transcript exon combination :: SRR1660809.49027.1, SRR3476690.409040.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000366974.9/ ENSP00000355941.4 RefSeq Select criteria :: based on conservation, expression ##RefSeq-Attributes-END## COMPLETENESS: full length. |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001036017.1 |
CDS | 29..853 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001042552.3 |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu10459 | |
Clone ID Related Accession (Same CDS sequence) | NM_001146169.1 , NM_001146169.2 | |
Accession Version | NM_001146169.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 723bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-23 | |
Organism | Homo sapiens(human) | |
Product | putative deoxyribonuclease TATDN3 isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK293129.1, BC143957.1, AC104333.2 and DB351940.1. Transcript Variant: This variant (3) uses two alternate splice sites in the 3' coding region compared to variant 1, one of which results in a frameshift. The encoded isoform (3) has a shorter and distinct C-terminus compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: BC143957.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2144120, SAMN01820693 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001139641.1 |
CDS | 95..817 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001146169.1 |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu10459 | |
Clone ID Related Accession (Same CDS sequence) | NM_001146169.1 , NM_001146169.2 | |
Accession Version | NM_001146169.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 723bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-31 | |
Organism | Homo sapiens(human) | |
Product | putative deoxyribonuclease TATDN3 isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC143957.1, AC104333.2 and DB351940.1. On Jun 1, 2019 this sequence version replaced NM_001146169.1. Transcript Variant: This variant (3) uses two alternate splice sites in the 3' coding region compared to variant 1, one of which results in a frameshift. The encoded isoform (3) has a shorter and distinct C-terminus compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: BC143957.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2144120, SAMN01820693 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001139641.1 |
CDS | 29..751 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001146169.2 |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu10583 | |
Clone ID Related Accession (Same CDS sequence) | NM_001146171.1 | |
Accession Version | NM_001146171.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 846bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-07-05 | |
Organism | Homo sapiens(human) | |
Product | putative deoxyribonuclease TATDN3 isoform 5 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK293129.1, BC143957.1, AC104333.2 and DB351940.1. Transcript Variant: This variant (5) uses an alternate in-frame splice site in the 3' coding region compared to variant 1. This results in a longer protein (isoform 5) compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: AK293129.1, SRR1660807.236021.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001139643.1 |
CDS | 95..940 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001146171.1 |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu11720 | |
Clone ID Related Accession (Same CDS sequence) | NM_001042553.2 | |
Accession Version | NM_001042553.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 822bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-07-04 | |
Organism | Homo sapiens(human) | |
Product | putative deoxyribonuclease TATDN3 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK293129.1, BC143956.1, AC104333.2 and DB351940.1. On Apr 1, 2009 this sequence version replaced NM_001042553.1. Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 3' coding region compared to variant 1. This results in a shorter protein (isoform 2) compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: SRR1660809.143864.1, SRR1660809.154179.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001036018.1 |
CDS | 95..916 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001042553.2 |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu11733 | |
Clone ID Related Accession (Same CDS sequence) | NM_001146170.1 | |
Accession Version | NM_001146170.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 762bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-07-04 | |
Organism | Homo sapiens(human) | |
Product | putative deoxyribonuclease TATDN3 isoform 4 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK293129.1, AK304557.1, AC104333.2 and DB351940.1. Transcript Variant: This variant (4) lacks an in-frame exon in the 5' coding region compared to variant 1. The encoded isoform (4) is shorter than isoform 1. ##Evidence-Data-START## Transcript exon combination :: SRR1803617.20299.1, SRR1803617.103758.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001139642.1 |
CDS | 95..856 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001146170.1 |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu75519 | |
Clone ID Related Accession (Same CDS sequence) | XM_011509202.2 , NM_001363589.1 | |
Accession Version | NM_001363589.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 579bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-07-05 | |
Organism | Homo sapiens(human) | |
Product | putative deoxyribonuclease TATDN3 isoform 6 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC104333.2. On May 24, 2018 this sequence version replaced XM_011509202.3. Transcript Variant: This variant (6) lacks an exon in the 3' coding region which causes a frameshift compared to variant 1. The encoded isoform (6) has a shorter and distinct C-terminus compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660805.71628.1, SRR1803614.68114.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968540, SAMEA1968968 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001350518.1 |
CDS | 95..673 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001363589.1 |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu75519 | |
Clone ID Related Accession (Same CDS sequence) | XM_011509202.2 , NM_001363589.1 | |
Accession Version | XM_011509202.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 579bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | putative deoxyribonuclease TATDN3 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000001.11) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_011509202.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011507504.1 |
CDS | 90..668 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011509202.2 |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu83145 | |
Clone ID Related Accession (Same CDS sequence) | XM_017000331.1 , NM_001363590.1 | |
Accession Version | NM_001363590.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 576bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-07-05 | |
Organism | Homo sapiens(human) | |
Product | putative deoxyribonuclease TATDN3 isoform 7 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC104333.2. On May 24, 2018 this sequence version replaced XM_017000331.2. Transcript Variant: This variant (7) uses an alternate splice site and lacks an exon in the 3' coding region which causes a frameshift compared to variant 1. The encoded isoform (7) has a shorter and distinct C-terminus compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1803611.66942.1, SRR1803611.18323.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1968189 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001350519.1 |
CDS | 95..670 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001363590.1 |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu103595 | |
Clone ID Related Accession (Same CDS sequence) | XM_024453283.1 | |
Accession Version | XM_024453283.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 666bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | putative deoxyribonuclease TATDN3 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000001.11) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAACTTT CAGAAAGGTA TAATGGGTTT GTCCTGCCAT GCTTGGGTGT TCATCCAGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024309051.1 |
CDS | 150..815 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024453283.1 |
1 | ATGCAACTTT CAGAAAGGTA TAATGGGTTT GTCCTGCCAT GCTTGGGTGT TCATCCAGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu83142 | |
Clone ID Related Accession (Same CDS sequence) | XM_017000328.1 , XM_017000328.2 | |
Accession Version | XM_017000328.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 783bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | putative deoxyribonuclease TATDN3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000001.11) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016855817.1 |
CDS | 90..872 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017000328.1 |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu83142 | |
Clone ID Related Accession (Same CDS sequence) | XM_017000328.1 , XM_017000328.2 | |
Accession Version | XM_017000328.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 783bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | putative deoxyribonuclease TATDN3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000001.11) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 26, 2018 this sequence version replaced XM_017000328.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016855817.1 |
CDS | 90..872 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017000328.2 |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu83143 | |
Clone ID Related Accession (Same CDS sequence) | XM_017000329.1 | |
Accession Version | XM_017000329.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 759bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | putative deoxyribonuclease TATDN3 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000001.11) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016855818.1 |
CDS | 90..848 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017000329.1 |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu83144 | |
Clone ID Related Accession (Same CDS sequence) | XM_017000330.1 , XM_017000330.2 | |
Accession Version | XM_017000330.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 744bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | putative deoxyribonuclease TATDN3 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000001.11) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016855819.1 |
CDS | 90..833 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017000330.1 |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu83144 | |
Clone ID Related Accession (Same CDS sequence) | XM_017000330.1 , XM_017000330.2 | |
Accession Version | XM_017000330.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 744bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | putative deoxyribonuclease TATDN3 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000001.11) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 26, 2018 this sequence version replaced XM_017000330.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016855819.1 |
CDS | 90..833 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017000330.2 |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu83145 | |
Clone ID Related Accession (Same CDS sequence) | XM_017000331.1 , NM_001363590.1 | |
Accession Version | XM_017000331.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 576bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | putative deoxyribonuclease TATDN3 isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000001.11) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016855820.1 |
CDS | 90..665 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017000331.1 |
1 | ATGCGAGCGG CTGGCGTAGG CTTGGTGGAC TGTCACTGCC ACCTCTCCGC CCCGGACTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
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Identification of intrahepatic cholangiocarcinoma related genes by comparison with normal liver tissues using expressed sequence tags. |
NotI flanking sequences: a tool for gene discovery and verification of the human genome. |