Gene Symbol | C1orf52 |
Entrez Gene ID | 148423 |
Full Name | chromosome 1 open reading frame 52 |
Synonyms | gm117 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
ORF » Species Summary » Homo sapiens » C1orf52 cDNA ORF clone
Gene Symbol | C1orf52 |
Entrez Gene ID | 148423 |
Full Name | chromosome 1 open reading frame 52 |
Synonyms | gm117 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_024453363.1 | XP_024309131.1 | UPF0690 protein C1orf52 isoform X1 |
NM_198077.4 | NP_932343.1 | UPF0690 protein C1orf52 |
NM_198077.3 | NP_932343.1 | UPF0690 protein C1orf52 |
Canis lupus familiaris (dog) | C6H1orf52 | XP_855354.2 |
Bos taurus (cattle) | C3H1orf52 | NP_001032681.1 |
Mus musculus (house mouse) | 2410004B18Rik | NP_079831.1 |
Xenopus tropicalis (tropical clawed frog) | c1orf52 | NP_001015959.1 |
Pan troglodytes (chimpanzee) | C1H1orf52 | XP_001141272.1 |
Danio rerio (zebrafish) | zgc:65873 | NP_956836.1 |
Homo sapiens (human) | C1orf52 | NP_932343.1 |
Rattus norvegicus (Norway rat) | RGD1560065 | NP_001128088.1 |
C1H1orf52 | XP_001108738.1 | |
Gallus gallus (chicken) | C8H1ORF52 | NP_001264489.1 |
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J, Hentze MW
Cell149(6)1393-406(2012 Jun)
Association between genetic variants in VEGF, ERCC3 and occupational benzene haematotoxicity.
Hosgood HD 3rd, Zhang L, Shen M, Berndt SI, Vermeulen R, Li G, Yin S, Yeager M, Yuenger J, Rothman N, Chanock S, Smith M, Lan Q
Occupational and environmental medicine66(12)848-53(2009 Dec)
Immunoaffinity profiling of tyrosine phosphorylation in cancer cells.
Rush J, Moritz A, Lee KA, Guo A, Goss VL, Spek EJ, Zhang H, Zha XM, Polakiewicz RD, Comb MJ
Nature biotechnology23(1)94-101(2005 Jan)
Identification of six novel genes by experimental validation of GeneMachine predicted genes.
Makalowska I, Sood R, Faruque MU, Hu P, Robbins CM, Eddings EM, Mestre JD, Baxevanis AD, Carpten JD
Gene284(1-2)203-13(2002 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Observational study of gene-disease association. (HuGE Navigator)
Title: Association between genetic variants in VEGF, ERCC3 and occupational benzene haematotoxicity.
The following C1orf52 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the C1orf52 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu24408 | |
Clone ID Related Accession (Same CDS sequence) | NM_198077.4 , NM_198077.3 | |
Accession Version | NM_198077.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 549bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-06 | |
Organism | Homo sapiens(human) | |
Product | UPF0690 protein C1orf52 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK126929.1, AY486331.1, AL590113.8 and BX118798.1. On Nov 22, 2018 this sequence version replaced NM_198077.3. Transcript Variant: This variant (1) represents the more frequently occurring transcript. It encodes a 182 aa protein. Sequence Note: The RefSeq transcript and protein were derived from transcript and genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR3476690.485274.1, SRR1660803.101464.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1968968, SAMEA2151358 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000471115.6/ ENSP00000419417.1 RefSeq Select criteria :: based on conservation ##RefSeq-Attributes-END## COMPLETENESS: full length. |
1 | ATGGCAGCGG AGGAGAAGGA CCCTCTGAGC TATTTTGCGG CATACGGGAG CAGCAGCTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_932343.1 |
CDS | 30..578 |
Translation |
Target ORF information:
Target ORF information:
|
NM_198077.4 |
1 | ATGGCAGCGG AGGAGAAGGA CCCTCTGAGC TATTTTGCGG CATACGGGAG CAGCAGCTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu24408 | |
Clone ID Related Accession (Same CDS sequence) | NM_198077.4 , NM_198077.3 | |
Accession Version | NM_198077.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 549bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-01 | |
Organism | Homo sapiens(human) | |
Product | UPF0690 protein C1orf52 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK126929.1, AY486331.1, AL590113.8 and BX118798.1. On Aug 28, 2008 this sequence version replaced NM_198077.2. Transcript Variant: This variant (1) represents the more frequently occurring transcript. It encodes a 182 aa protein. Sequence Note: The RefSeq transcript and protein were derived from transcript and genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1163658.439474.1, SRR1660803.101464.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1968968, SAMEA2151358 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCAGCGG AGGAGAAGGA CCCTCTGAGC TATTTTGCGG CATACGGGAG CAGCAGCTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_932343.1 |
CDS | 40..588 |
Translation |
Target ORF information:
Target ORF information:
|
NM_198077.3 |
1 | ATGGCAGCGG AGGAGAAGGA CCCTCTGAGC TATTTTGCGG CATACGGGAG CAGCAGCTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu103600 | |
Clone ID Related Accession (Same CDS sequence) | XM_024453363.1 | |
Accession Version | XM_024453363.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 555bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | UPF0690 protein C1orf52 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000001.11) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCAGCGG AGGAGAAGGA CCCTCTGAGC TATTTTGCGG CATACGGGAG CAGCAGCTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024309131.1 |
CDS | 45..599 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024453363.1 |
1 | ATGGCAGCGG AGGAGAAGGA CCCTCTGAGC TATTTTGCGG CATACGGGAG CAGCAGCTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. |
Association between genetic variants in VEGF, ERCC3 and occupational benzene haematotoxicity. |
Immunoaffinity profiling of tyrosine phosphorylation in cancer cells. |
Identification of six novel genes by experimental validation of GeneMachine predicted genes. |