Gene Symbol | TTC9C |
Entrez Gene ID | 283237 |
Full Name | tetratricopeptide repeat domain 9C |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
ORF » Species Summary » Homo sapiens » TTC9C cDNA ORF clone
Gene Symbol | TTC9C |
Entrez Gene ID | 283237 |
Full Name | tetratricopeptide repeat domain 9C |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001318816.1 | NP_001305745.1 | tetratricopeptide repeat protein 9C isoform b |
NM_001318814.1 | NP_001305743.1 | tetratricopeptide repeat protein 9C isoform b |
NM_001318815.1 | NP_001305744.1 | tetratricopeptide repeat protein 9C isoform b |
NM_173810.3 | NP_776171.1 | tetratricopeptide repeat protein 9C isoform a |
NM_173810.4 | NP_776171.1 | tetratricopeptide repeat protein 9C isoform a |
XM_005273930.2 | XP_005273987.1 | tetratricopeptide repeat protein 9C isoform X1 |
XM_005273931.1 | XP_005273988.1 | tetratricopeptide repeat protein 9C isoform X1 |
NM_001318813.1 | NP_001305742.1 | tetratricopeptide repeat protein 9C isoform a |
NM_001318812.1 | NP_001305741.1 | tetratricopeptide repeat protein 9C isoform a |
XM_024448452.1 | XP_024304220.1 | tetratricopeptide repeat protein 9C isoform X1 |
Canis lupus familiaris (dog) | TTC9C | XP_005631666.1 |
Homo sapiens (human) | TTC9C | NP_776171.1 |
Pan troglodytes (chimpanzee) | TTC9C | XP_001157174.1 |
Rattus norvegicus (Norway rat) | Ttc9c | NP_001007694.1 |
TTC9C | XP_001116168.1 | |
Bos taurus (cattle) | TTC9C | NP_001077261.1 |
Mus musculus (house mouse) | Ttc9c | NP_081688.2 |
Danio rerio (zebrafish) | ttc9c | NP_956559.1 |
Xenopus tropicalis (tropical clawed frog) | ttc9c | NP_001096317.1 |
A human interactome in three quantitative dimensions organized by stoichiometries and abundances.
Hein MY, Hubner NC, Poser I, Cox J, Nagaraj N, Toyoda Y, Gak IA, Weisswange I, Mansfeld J, Buchholz F, Hyman AA, Mann M
Cell163(3)712-23(2015 Oct)
Prefrontal cortex shotgun proteome analysis reveals altered calcium homeostasis and immune system imbalance in schizophrenia.
Martins-de-Souza D, Gattaz WF, Schmitt A, Rewerts C, Maccarrone G, Dias-Neto E, Turck CW
European archives of psychiatry and clinical neuroscience259(3)151-63(2009 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Using shotgun mass spectrometry, we found this protein differentially expressed in the dorsolateral prefrontal cortex from patients with schizophrenia.
Title: Prefrontal cortex shotgun proteome analysis reveals altered calcium homeostasis and immune system imbalance in schizophrenia.
The following TTC9C gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TTC9C cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu29725 | |
Clone ID Related Accession (Same CDS sequence) | NM_173810.3 , NM_173810.4 , XM_005273930.2 , XM_005273931.1 , NM_001318813.1 , NM_001318812.1 | |
Accession Version | NM_173810.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 516bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-09-30 | |
Organism | Homo sapiens(human) | |
Product | tetratricopeptide repeat protein 9C isoform a | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC032123.2. On Aug 26, 2003 this sequence version replaced NM_173810.2. Transcript Variant: This variant (1) encodes isoform a. Variants 1, 2, and 3 all encode the same isoform (a). ##Evidence-Data-START## Transcript exon combination :: BC032123.2, SRR1163658.322649.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGAAGC GTCTGCAGGA GGCTCAGCTG TACAAGGAGG AAGGGAACCA GCGCTACCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_776171.1 |
CDS | 370..885 |
Translation |
Target ORF information:
Target ORF information:
|
NM_173810.3 |
1 | ATGGAGAAGC GTCTGCAGGA GGCTCAGCTG TACAAGGAGG AAGGGAACCA GCGCTACCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu29725 | |
Clone ID Related Accession (Same CDS sequence) | NM_173810.3 , NM_173810.4 , XM_005273930.2 , XM_005273931.1 , NM_001318813.1 , NM_001318812.1 | |
Accession Version | NM_173810.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 516bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-01 | |
Organism | Homo sapiens(human) | |
Product | tetratricopeptide repeat protein 9C isoform a | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC032123.2. On Nov 24, 2018 this sequence version replaced NM_173810.3. Transcript Variant: This variant (1) encodes isoform a. Variants 1, 2, and 3 all encode the same isoform (a). ##Evidence-Data-START## Transcript exon combination :: BC032123.2, SRR1660803.105027.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000316461.9/ ENSP00000325266.3 RefSeq Select criteria :: based on conservation, expression ##RefSeq-Attributes-END## COMPLETENESS: full length. |
1 | ATGGAGAAGC GTCTGCAGGA GGCTCAGCTG TACAAGGAGG AAGGGAACCA GCGCTACCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_776171.1 |
CDS | 364..879 |
Translation |
Target ORF information:
Target ORF information:
|
NM_173810.4 |
1 | ATGGAGAAGC GTCTGCAGGA GGCTCAGCTG TACAAGGAGG AAGGGAACCA GCGCTACCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu29725 | |
Clone ID Related Accession (Same CDS sequence) | NM_173810.3 , NM_173810.4 , XM_005273930.2 , XM_005273931.1 , NM_001318813.1 , NM_001318812.1 | |
Accession Version | NM_001318813.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 516bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-30 | |
Organism | Homo sapiens(human) | |
Product | tetratricopeptide repeat protein 9C isoform a | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC032123.2 and BQ050575.1. On Jan 14, 2016 this sequence version replaced XM_005273930.2. Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1, 2, and 3 all encode the same isoform (a). ##Evidence-Data-START## Transcript exon combination :: SRR1163655.144220.1, SRR1163658.122692.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGAAGC GTCTGCAGGA GGCTCAGCTG TACAAGGAGG AAGGGAACCA GCGCTACCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001305742.1 |
CDS | 284..799 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001318813.1 |
1 | ATGGAGAAGC GTCTGCAGGA GGCTCAGCTG TACAAGGAGG AAGGGAACCA GCGCTACCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu29725 | |
Clone ID Related Accession (Same CDS sequence) | NM_173810.3 , NM_173810.4 , XM_005273930.2 , XM_005273931.1 , NM_001318813.1 , NM_001318812.1 | |
Accession Version | NM_001318812.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 516bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-30 | |
Organism | Homo sapiens(human) | |
Product | tetratricopeptide repeat protein 9C isoform a | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BG720745.1 and BC032123.2. On Jan 14, 2016 this sequence version replaced XM_005273931.1. Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2, and 3 all encode the same isoform (a). ##Evidence-Data-START## Transcript exon combination :: SRR1163657.294079.1, SRR1163658.130143.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGAAGC GTCTGCAGGA GGCTCAGCTG TACAAGGAGG AAGGGAACCA GCGCTACCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001305741.1 |
CDS | 182..697 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001318812.1 |
1 | ATGGAGAAGC GTCTGCAGGA GGCTCAGCTG TACAAGGAGG AAGGGAACCA GCGCTACCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu29725 | |
Clone ID Related Accession (Same CDS sequence) | NM_173810.3 , NM_173810.4 , XM_005273930.2 , XM_005273931.1 , NM_001318813.1 , NM_001318812.1 | |
Accession Version | XM_005273930.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 516bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-03-11 | |
Organism | Homo sapiens(Human) | |
Product | tetratricopeptide repeat protein 9C isoform X1 | |
Comment |
1 | ATGGAGAAGC GTCTGCAGGA GGCTCAGCTG TACAAGGAGG AAGGGAACCA GCGCTACCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005273987.1 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005273930.2 |
1 | ATGGAGAAGC GTCTGCAGGA GGCTCAGCTG TACAAGGAGG AAGGGAACCA GCGCTACCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu29725 | |
Clone ID Related Accession (Same CDS sequence) | NM_173810.3 , NM_173810.4 , XM_005273930.2 , XM_005273931.1 , NM_001318813.1 , NM_001318812.1 | |
Accession Version | XM_005273931.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 516bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-03-11 | |
Organism | Homo sapiens(Human) | |
Product | tetratricopeptide repeat protein 9C isoform X1 | |
Comment |
1 | ATGGAGAAGC GTCTGCAGGA GGCTCAGCTG TACAAGGAGG AAGGGAACCA GCGCTACCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005273988.1 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005273931.1 |
1 | ATGGAGAAGC GTCTGCAGGA GGCTCAGCTG TACAAGGAGG AAGGGAACCA GCGCTACCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu101676 | |
Clone ID Related Accession (Same CDS sequence) | NM_001318816.1 , NM_001318814.1 , NM_001318815.1 | |
Accession Version | NM_001318816.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 264bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-30 | |
Organism | Homo sapiens(human) | |
Product | tetratricopeptide repeat protein 9C isoform b | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC032123.2 and CN430377.1. Transcript Variant: This variant (6) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (b) is shorter at the N-terminus compared to isoform a. Variants 4, 5, and 6 all encode the same isoform (b). ##Evidence-Data-START## CDS exon combination :: SRR1163655.598770.1, SRR1163658.332281.1 [ECO:0000331] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGCCCG TGAACTACGA ACGAGTGAGA GAATATAGTC AGAAAGTCCT GGAACGACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001305745.1 |
CDS | 704..967 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001318816.1 |
1 | ATGGAGCCCG TGAACTACGA ACGAGTGAGA GAATATAGTC AGAAAGTCCT GGAACGACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu101676 | |
Clone ID Related Accession (Same CDS sequence) | NM_001318816.1 , NM_001318814.1 , NM_001318815.1 | |
Accession Version | NM_001318814.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 264bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-30 | |
Organism | Homo sapiens(human) | |
Product | tetratricopeptide repeat protein 9C isoform b | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC032123.2 and BX421356.2. Transcript Variant: This variant (4) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (b) is shorter at the N-terminus compared to isoform a. Variants 4, 5, and 6 all encode the same isoform (b). ##Evidence-Data-START## Transcript exon combination :: BX421356.2 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGCCCG TGAACTACGA ACGAGTGAGA GAATATAGTC AGAAAGTCCT GGAACGACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001305743.1 |
CDS | 618..881 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001318814.1 |
1 | ATGGAGCCCG TGAACTACGA ACGAGTGAGA GAATATAGTC AGAAAGTCCT GGAACGACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu101676 | |
Clone ID Related Accession (Same CDS sequence) | NM_001318816.1 , NM_001318814.1 , NM_001318815.1 | |
Accession Version | NM_001318815.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 264bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-30 | |
Organism | Homo sapiens(human) | |
Product | tetratricopeptide repeat protein 9C isoform b | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC032123.2 and CN430374.1. Transcript Variant: This variant (5) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (b) is shorter at the N-terminus compared to isoform a. Variants 4, 5, and 6 all encode the same isoform (b). ##Evidence-Data-START## Transcript exon combination :: CN430374.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968540, SAMEA2142348 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGCCCG TGAACTACGA ACGAGTGAGA GAATATAGTC AGAAAGTCCT GGAACGACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001305744.1 |
CDS | 379..642 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001318815.1 |
1 | ATGGAGCCCG TGAACTACGA ACGAGTGAGA GAATATAGTC AGAAAGTCCT GGAACGACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu106643 | |
Clone ID Related Accession (Same CDS sequence) | XM_024448452.1 | |
Accession Version | XM_024448452.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 915bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | tetratricopeptide repeat protein 9C isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000011.10) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTGAATA AGGAAGAAGA GTTAGAATTG CTTGAAGCCC TCTGGAGTTT TAGCACTAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024304220.1 |
CDS | 27..941 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024448452.1 |
1 | ATGTTGAATA AGGAAGAAGA GTTAGAATTG CTTGAAGCCC TCTGGAGTTT TAGCACTAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A human interactome in three quantitative dimensions organized by stoichiometries and abundances. |
Prefrontal cortex shotgun proteome analysis reveals altered calcium homeostasis and immune system imbalance in schizophrenia. |