TRA2A cDNA ORF clone, Homo sapiens(human)
Gene Symbol | TRA2A |
Entrez Gene ID | 29896 |
Full Name | transformer 2 alpha homolog |
Synonyms | AWMS1,HSU53209 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome | |
Summary | This gene is a member of the transformer 2 homolog family and encodes a protein with several RRM (RNA recognition motif) domains. This phosphorylated nuclear protein binds to specific RNA sequences and plays a role in the regulation of pre-mRNA splicing. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Sep 2013]. |
Disorder MIM: |
mRNA and Protein(s)
mRNA | Protein | Name |
---|---|---|
XM_006715713.1 | XP_006715776.1 | transformer-2 protein homolog alpha isoform X1 |
XM_017012089.1 | XP_016867578.1 | transformer-2 protein homolog alpha isoform X2 |
NM_001362761.2 | NP_001349690.1 | transformer-2 protein homolog alpha isoform 2 |
NM_001362760.1 | NP_001349689.1 | transformer-2 protein homolog alpha isoform 2 |
NM_013293.5 | NP_037425.1 | transformer-2 protein homolog alpha isoform 1 |
XM_011515331.1 | XP_011513633.1 | transformer-2 protein homolog alpha isoform X1 |
NM_013293.4 | NP_037425.1 | transformer-2 protein homolog alpha isoform 1 |
NM_001362759.1 | NP_001349688.1 | transformer-2 protein homolog alpha isoform 4 |
NM_001362760.2 | NP_001349689.1 | transformer-2 protein homolog alpha isoform 2 |
NM_001282758.1 | NP_001269687.1 | transformer-2 protein homolog alpha isoform 2 |
NM_001282759.1 | NP_001269688.1 | transformer-2 protein homolog alpha isoform 3 |
NM_001362761.1 | NP_001349690.1 | transformer-2 protein homolog alpha isoform 2 |
NM_001282757.1 | NP_001269686.1 | transformer-2 protein homolog alpha isoform 2 |
XM_005249725.1 | XP_005249782.1 | transformer-2 protein homolog alpha isoform X2 |
NM_001362759.2 | NP_001349688.1 | transformer-2 protein homolog alpha isoform 4 |
XM_017012090.1 | XP_016867579.1 | transformer-2 protein homolog alpha isoform X2 |

Canis lupus familiaris (dog) | TRA2A | XP_539475.3 |
Danio rerio (zebrafish) | tra2a | NP_956710.1 |
Pan troglodytes (chimpanzee) | TRA2A | XP_001158245.1 |
Mus musculus (house mouse) | Tra2a | NP_932770.2 |
Gallus gallus (chicken) | TRA2A | NP_001006360.1 |
Homo sapiens (human) | TRA2A | NP_037425.1 |
Rattus norvegicus (Norway rat) | Tra2a | NP_001119768.2 |
Xenopus tropicalis (tropical clawed frog) | tra2a | NP_001004819.1 |
TRA2A | XP_001083952.2 | |
Bos taurus (cattle) | TRA2A | NP_001039845.1 |

Related articles in PubMed
TRA2A Promoted Paclitaxel Resistance and Tumor Progression in Triple-Negative Breast Cancers via Regulating Alternative Splicing.
Liu T, Sun H, Zhu D, Dong X, Liu F, Liang X, Chen C, Shao B, Wang M, Wang Y, Sun B
Molecular cancer therapeutics16(7)1377-1388(2017 Jul)
Differential Effects of Tra2? Isoforms on HIV-1 RNA Processing and Expression.
Platt C, Calimano M, Nemet J, Bubenik J, Cochrane A
PloS one10(5)e0125315(2015)
Tra2-mediated recognition of HIV-1 5' splice site D3 as a key factor in the processing of vpr mRNA.
Erkelenz S, Poschmann G, Theiss S, Stefanski A, Hillebrand F, Otte M, St?hler K, Schaal H
Journal of virology87(5)2721-34(2013 Mar)
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Baltz AG, Munschauer M, Schwanh?usser B, Vasile A, Murakawa Y, Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E, Bonneau R, Selbach M, Dieterich C, Landthaler M
Molecular cell46(5)674-90(2012 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Overexpression of either Tra2alpha or Tra2beta results in a marked reduction in HIV-1 Gag/ Env expression.
Title: Differential Effects of Tra2? Isoforms on HIV-1 RNA Processing and Expression.
findings show the inclusion of both HIV-1 exon 3 and vpr mRNA processing is promoted by an exonic splicing enhancer (ESEvpr) localized between exonic splicing silencer ESSV and 5'ss D3; the ESEvpr sequence was found to be bound by members of the Tra2 protein family
Title: Tra2-mediated recognition of HIV-1 5' splice site D3 as a key factor in the processing of vpr mRNA.
Expression of tumor-promoting Cyr61 is regulated by hTRA2-beta1 and acidosis.
Title: Expression of tumor-promoting Cyr61 is regulated by hTRA2-?1 and acidosis.
The following TRA2A gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TRA2A cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OHu08001![]() |
|
Clone ID Related Accession (Same CDS sequence) | XM_006715713.1 , XM_017012089.1 , NM_001362761.2 , NM_001362760.1 , NM_001362760.2 , NM_001282758.1 , NM_001362761.1 , NM_001282757.1 , XM_005249725.1 , XM_017012090.1 | |
Accession Version | NM_001362761.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 546bp) Protein sequence SNP |
|
Vector | pcDNA3.1+/C-(K)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-07 | |
Organism | Homo sapiens(human) | |
Product | transformer-2 protein homolog alpha isoform 2 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from BP376263.1, AK300565.1, DA361083.1, U53209.1 and AB097048.1. On Jun 1, 2019 this sequence version replaced NM_001362761.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR7346977.1241795.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968189, SAMEA2149178 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTCTAACC GGAGAAGACA TACTGGCAGC AGGGCAAATC CAGATCCCAA CACTTGCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001349690.1 |
CDS | 1053..1598 |
Translation |

Target ORF information:
Target ORF information:
|
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ORF Insert Sequence:
1 | ATGTCTAACC GGAGAAGACA TACTGGCAGC AGGGCAAATC CAGATCCCAA CACTTGCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu08001![]() |
|
Clone ID Related Accession (Same CDS sequence) | XM_006715713.1 , XM_017012089.1 , NM_001362761.2 , NM_001362760.1 , NM_001362760.2 , NM_001282758.1 , NM_001362761.1 , NM_001282757.1 , XM_005249725.1 , XM_017012090.1 | |
Accession Version | NM_001362760.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 546bp) Protein sequence SNP |
|
Vector | pcDNA3.1+/C-(K)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-14 | |
Organism | Homo sapiens(human) | |
Product | transformer-2 protein homolog alpha isoform 2 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from BG722500.1, AC023105.7, AK311687.1, AK300565.1, U53209.1 and AB097048.1. On Apr 26, 2018 this sequence version replaced XM_005249725.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR1163658.303747.1, SRR1163655.310823.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968189, SAMEA2149178 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTCTAACC GGAGAAGACA TACTGGCAGC AGGGCAAATC CAGATCCCAA CACTTGCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001349689.1 |
CDS | 833..1378 |
Translation |

Target ORF information:
Target ORF information:
|
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ORF Insert Sequence:
1 | ATGTCTAACC GGAGAAGACA TACTGGCAGC AGGGCAAATC CAGATCCCAA CACTTGCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu08001![]() |
|
Clone ID Related Accession (Same CDS sequence) | XM_006715713.1 , XM_017012089.1 , NM_001362761.2 , NM_001362760.1 , NM_001362760.2 , NM_001282758.1 , NM_001362761.1 , NM_001282757.1 , XM_005249725.1 , XM_017012090.1 | |
Accession Version | NM_001362760.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 546bp) Protein sequence SNP |
|
Vector | pcDNA3.1+/C-(K)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-07 | |
Organism | Homo sapiens(human) | |
Product | transformer-2 protein homolog alpha isoform 2 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from BG722500.1, AK311687.1, AK300565.1, U53209.1 and AB097048.1. On May 31, 2019 this sequence version replaced NM_001362760.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR1163658.303747.1, SRR1163655.310823.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968189, SAMEA2149178 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTCTAACC GGAGAAGACA TACTGGCAGC AGGGCAAATC CAGATCCCAA CACTTGCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001349689.1 |
CDS | 773..1318 |
Translation |

Target ORF information:
Target ORF information:
|
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ORF Insert Sequence:
1 | ATGTCTAACC GGAGAAGACA TACTGGCAGC AGGGCAAATC CAGATCCCAA CACTTGCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu08001![]() |
|
Clone ID Related Accession (Same CDS sequence) | XM_006715713.1 , XM_017012089.1 , NM_001362761.2 , NM_001362760.1 , NM_001362760.2 , NM_001282758.1 , NM_001362761.1 , NM_001282757.1 , XM_005249725.1 , XM_017012090.1 | |
Accession Version | NM_001282758.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 546bp) Protein sequence SNP |
|
Vector | pcDNA3.1+/C-(K)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-07 | |
Organism | Homo sapiens(human) | |
Product | transformer-2 protein homolog alpha isoform 2 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from BG722500.1, AC023105.7, BP376263.1, AK300741.1, U53209.1 and AB097048.1. Transcript Variant: This variant (3) contains an additional exon in the 5' region that results in translation initiation from an in-frame downstream start codon compared to variant 1. The resulting isoform (2) has a shorter N-terminus compared to isoform 1. Variants 2 and 3 encode the same isoform. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK300741.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968189, SAMEA2149178 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTCTAACC GGAGAAGACA TACTGGCAGC AGGGCAAATC CAGATCCCAA CACTTGCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001269687.1 |
CDS | 611..1156 |
Translation |

Target ORF information:
Target ORF information:
|
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ORF Insert Sequence:
1 | ATGTCTAACC GGAGAAGACA TACTGGCAGC AGGGCAAATC CAGATCCCAA CACTTGCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu08001![]() |
|
Clone ID Related Accession (Same CDS sequence) | XM_006715713.1 , XM_017012089.1 , NM_001362761.2 , NM_001362760.1 , NM_001362760.2 , NM_001282758.1 , NM_001362761.1 , NM_001282757.1 , XM_005249725.1 , XM_017012090.1 | |
Accession Version | NM_001362761.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 546bp) Protein sequence SNP |
|
Vector | pcDNA3.1+/C-(K)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-14 | |
Organism | Homo sapiens(human) | |
Product | transformer-2 protein homolog alpha isoform 2 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from BG722500.1, AC023105.7, BP376263.1, AK300565.1, DA361083.1, U53209.1 and AB097048.1. On Apr 26, 2018 this sequence version replaced XM_017012089.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## CDS exon combination :: SRR3476690.463285.1, SRR1163655.166566.1 [ECO:0000331] RNAseq introns :: single sample supports all introns SAMEA1968189, SAMEA2149178 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTCTAACC GGAGAAGACA TACTGGCAGC AGGGCAAATC CAGATCCCAA CACTTGCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001349690.1 |
CDS | 1113..1658 |
Translation |

Target ORF information:
Target ORF information:
|
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ORF Insert Sequence:
1 | ATGTCTAACC GGAGAAGACA TACTGGCAGC AGGGCAAATC CAGATCCCAA CACTTGCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu08001![]() |
|
Clone ID Related Accession (Same CDS sequence) | XM_006715713.1 , XM_017012089.1 , NM_001362761.2 , NM_001362760.1 , NM_001362760.2 , NM_001282758.1 , NM_001362761.1 , NM_001282757.1 , XM_005249725.1 , XM_017012090.1 | |
Accession Version | NM_001282757.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 546bp) Protein sequence SNP |
|
Vector | pcDNA3.1+/C-(K)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-07 | |
Organism | Homo sapiens(human) | |
Product | transformer-2 protein homolog alpha isoform 2 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from BG722500.1, AC023105.7, BP376263.1, AK300565.1, U53209.1 and AB097048.1. On Sep 19, 2013 this sequence version replaced XM_005249727.1. Transcript Variant: This variant (2) contains an additional exon in the 5' region that results in translation initiation from an in-frame downstream start codon compared to variant 1. The resulting isoform (2) has a shorter N-terminus compared to isoform 1. Variants 2 and 3 encode the same isoform. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK300565.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968189, SAMEA2149178 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTCTAACC GGAGAAGACA TACTGGCAGC AGGGCAAATC CAGATCCCAA CACTTGCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001269686.1 |
CDS | 822..1367 |
Translation |

Target ORF information:
Target ORF information:
|
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ORF Insert Sequence:
1 | ATGTCTAACC GGAGAAGACA TACTGGCAGC AGGGCAAATC CAGATCCCAA CACTTGCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu12304![]() |
|
Clone ID Related Accession (Same CDS sequence) | NM_013293.5 , NM_013293.4 | |
Accession Version | NM_013293.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 849bp) Protein sequence SNP |
|
Vector | pcDNA3.1+/C-(K)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-07 | |
Organism | Homo sapiens(human) | |
Product | transformer-2 protein homolog alpha isoform 1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from BP376263.1, U53209.1 and AB097048.1. On Nov 23, 2018 this sequence version replaced NM_013293.4. Transcript Variant: This variant (1) encodes the longest isoform (1). Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR3476690.463285.1, SRR5189655.158764.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968189, SAMEA2149178 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000297071.9/ ENSP00000297071.4 RefSeq Select criteria :: based on conservation, expression, longest protein ##RefSeq-Attributes-END## COMPLETENESS: full length. |
1 | ATGAGTGATG TGGAGGAAAA CAACTTCGAG GGCAGAGAGT CTCGCTCTCA GTCAAAATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_037425.1 |
CDS | 158..1006 |
Translation |

Target ORF information:
Target ORF information:
|
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ORF Insert Sequence:
1 | ATGAGTGATG TGGAGGAAAA CAACTTCGAG GGCAGAGAGT CTCGCTCTCA GTCAAAATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu12304![]() |
|
Clone ID Related Accession (Same CDS sequence) | NM_013293.5 , NM_013293.4 | |
Accession Version | NM_013293.4 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 849bp) Protein sequence SNP |
|
Vector | pcDNA3.1+/C-(K)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-02 | |
Organism | Homo sapiens(human) | |
Product | transformer-2 protein homolog alpha isoform 1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from BG722500.1, AC023105.7, BP376263.1, U53209.1 and AB097048.1. On Sep 19, 2013 this sequence version replaced NM_013293.3. Transcript Variant: This variant (1) encodes the longest isoform (1). Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AB097048.1, SRR1163655.665343.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968189, SAMEA2149178 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAGTGATG TGGAGGAAAA CAACTTCGAG GGCAGAGAGT CTCGCTCTCA GTCAAAATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_037425.1 |
CDS | 218..1066 |
Translation |

Target ORF information:
Target ORF information:
|
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ORF Insert Sequence:
1 | ATGAGTGATG TGGAGGAAAA CAACTTCGAG GGCAGAGAGT CTCGCTCTCA GTCAAAATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu08001![]() |
|
Clone ID Related Accession (Same CDS sequence) | XM_006715713.1 , XM_017012089.1 , NM_001362761.2 , NM_001362760.1 , NM_001362760.2 , NM_001282758.1 , NM_001362761.1 , NM_001282757.1 , XM_005249725.1 , XM_017012090.1 | |
Accession Version | XM_006715713.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 546bp) Protein sequence SNP |
|
Vector | pcDNA3.1+/C-(K)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-03-11 | |
Organism | Homo sapiens(Human) | |
Product | transformer-2 protein homolog alpha isoform X1 | |
Comment |
1 | ATGTCTAACC GGAGAAGACA TACTGGCAGC AGGGCAAATC CAGATCCCAA CACTTGCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006715776.1 |
Translation |

Target ORF information:
Target ORF information:
|
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ORF Insert Sequence:
1 | ATGTCTAACC GGAGAAGACA TACTGGCAGC AGGGCAAATC CAGATCCCAA CACTTGCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu08001![]() |
|
Clone ID Related Accession (Same CDS sequence) | XM_006715713.1 , XM_017012089.1 , NM_001362761.2 , NM_001362760.1 , NM_001362760.2 , NM_001282758.1 , NM_001362761.1 , NM_001282757.1 , XM_005249725.1 , XM_017012090.1 | |
Accession Version | XM_017012089.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 546bp) Protein sequence SNP |
|
Vector | pcDNA3.1+/C-(K)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | transformer-2 protein homolog alpha isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000007.14) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCTAACC GGAGAAGACA TACTGGCAGC AGGGCAAATC CAGATCCCAA CACTTGCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016867578.1 |
CDS | 1053..1598 |
Translation |

Target ORF information:
Target ORF information:
|
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ORF Insert Sequence:
1 | ATGTCTAACC GGAGAAGACA TACTGGCAGC AGGGCAAATC CAGATCCCAA CACTTGCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu08001![]() |
|
Clone ID Related Accession (Same CDS sequence) | XM_006715713.1 , XM_017012089.1 , NM_001362761.2 , NM_001362760.1 , NM_001362760.2 , NM_001282758.1 , NM_001362761.1 , NM_001282757.1 , XM_005249725.1 , XM_017012090.1 | |
Accession Version | XM_005249725.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 546bp) Protein sequence SNP |
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Vector | pcDNA3.1+/C-(K)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | transformer-2 protein homolog alpha isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000007.14) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCTAACC GGAGAAGACA TACTGGCAGC AGGGCAAATC CAGATCCCAA CACTTGCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005249782.1 |
CDS | 808..1353 |
Translation |

Target ORF information:
Target ORF information:
|
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ORF Insert Sequence:
1 | ATGTCTAACC GGAGAAGACA TACTGGCAGC AGGGCAAATC CAGATCCCAA CACTTGCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu08001![]() |
|
Clone ID Related Accession (Same CDS sequence) | XM_006715713.1 , XM_017012089.1 , NM_001362761.2 , NM_001362760.1 , NM_001362760.2 , NM_001282758.1 , NM_001362761.1 , NM_001282757.1 , XM_005249725.1 , XM_017012090.1 | |
Accession Version | XM_017012090.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 546bp) Protein sequence SNP |
|
Vector | pcDNA3.1+/C-(K)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | transformer-2 protein homolog alpha isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000007.14) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCTAACC GGAGAAGACA TACTGGCAGC AGGGCAAATC CAGATCCCAA CACTTGCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016867579.1 |
CDS | 863..1408 |
Translation |

Target ORF information:
Target ORF information:
|
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ORF Insert Sequence:
1 | ATGTCTAACC GGAGAAGACA TACTGGCAGC AGGGCAAATC CAGATCCCAA CACTTGCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu08467 | |
Clone ID Related Accession (Same CDS sequence) | NM_001282759.1 | |
Accession Version | NM_001282759.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 543bp) Protein sequence SNP |
|
Vector | pcDNA3.1+/C-(K)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-07 | |
Organism | Homo sapiens(human) | |
Product | transformer-2 protein homolog alpha isoform 3 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from BG722500.1, AC023105.7, BP376263.1, AK298815.1, AK300741.1 and AB097048.1. Transcript Variant: This variant (4) contains two additional exons in the 5' region and uses an alternate in-frame acceptor splice site in the 3' coding region compared to variant 1. The former difference results in translation initiation from an in-frame downstream start codon, and an isoform (3) with a shorter N-terminus compared to isoform 1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK298815.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2146236, SAMEA2150385 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTCTAACC GGAGAAGACA TACTGGCAGC AGGGCAAATC CAGATCCCAA CACTTGCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001269688.1 |
CDS | 912..1454 |
Translation |

Target ORF information:
Target ORF information:
|
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ORF Insert Sequence:
1 | ATGTCTAACC GGAGAAGACA TACTGGCAGC AGGGCAAATC CAGATCCCAA CACTTGCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu67399 | |
Clone ID Related Accession (Same CDS sequence) | XM_011515331.1 , NM_001362759.1 , NM_001362759.2 | |
Accession Version | NM_001362759.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 660bp) Protein sequence SNP |
|
Vector | pcDNA3.1+/C-(K)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-30 | |
Organism | Homo sapiens(human) | |
Product | transformer-2 protein homolog alpha isoform 4 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from BG722500.1, AC023105.7, HY021807.1, CN428527.1, AK300565.1, U53209.1 and AB097048.1. On Apr 26, 2018 this sequence version replaced XM_011515331.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR1163657.295891.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968189, SAMEA2149398 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAGTGATG TGGAGGAAAA CAACTTCGAG GGCAGAGAGT CTCGCTCTCA GTCAAAATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001349688.1 |
CDS | 218..877 |
Translation |

Target ORF information:
Target ORF information:
|
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ORF Insert Sequence:
1 | ATGAGTGATG TGGAGGAAAA CAACTTCGAG GGCAGAGAGT CTCGCTCTCA GTCAAAATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu67399 | |
Clone ID Related Accession (Same CDS sequence) | XM_011515331.1 , NM_001362759.1 , NM_001362759.2 | |
Accession Version | NM_001362759.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 660bp) Protein sequence SNP |
|
Vector | pcDNA3.1+/C-(K)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-07 | |
Organism | Homo sapiens(human) | |
Product | transformer-2 protein homolog alpha isoform 4 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from HY021807.1, CN428527.1, AK300565.1, U53209.1 and AB097048.1. On Jun 1, 2019 this sequence version replaced NM_001362759.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR1163657.295891.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968189, SAMEA2149398 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAGTGATG TGGAGGAAAA CAACTTCGAG GGCAGAGAGT CTCGCTCTCA GTCAAAATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001349688.1 |
CDS | 158..817 |
Translation |

Target ORF information:
Target ORF information:
|
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ORF Insert Sequence:
1 | ATGAGTGATG TGGAGGAAAA CAACTTCGAG GGCAGAGAGT CTCGCTCTCA GTCAAAATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu67399 | |
Clone ID Related Accession (Same CDS sequence) | XM_011515331.1 , NM_001362759.1 , NM_001362759.2 | |
Accession Version | XM_011515331.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 660bp) Protein sequence SNP |
|
Vector | pcDNA3.1+/C-(K)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | transformer-2 protein homolog alpha isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000007.14) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGTGATG TGGAGGAAAA CAACTTCGAG GGCAGAGAGT CTCGCTCTCA GTCAAAATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011513633.1 |
CDS | 209..868 |
Translation |

Target ORF information:
Target ORF information:
|
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ORF Insert Sequence:
1 | ATGAGTGATG TGGAGGAAAA CAACTTCGAG GGCAGAGAGT CTCGCTCTCA GTCAAAATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
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TRA2A Promoted Paclitaxel Resistance and Tumor Progression in Triple-Negative Breast Cancers via Regulating Alternative Splicing. |
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Differential Effects of Tra2? Isoforms on HIV-1 RNA Processing and Expression. |
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Tra2-mediated recognition of HIV-1 5' splice site D3 as a key factor in the processing of vpr mRNA. |
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The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. |