Gene Symbol | SAMD7 |
Entrez Gene ID | 344658 |
Full Name | sterile alpha motif domain containing 7 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
ORF » Species Summary » Homo sapiens » SAMD7 cDNA ORF clone
Gene Symbol | SAMD7 |
Entrez Gene ID | 344658 |
Full Name | sterile alpha motif domain containing 7 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001304366.2 | NP_001291295.1 | sterile alpha motif domain-containing protein 7 |
XM_011512752.1 | XP_011511054.1 | sterile alpha motif domain-containing protein 7 isoform X1 |
NM_182610.3 | NP_872416.1 | sterile alpha motif domain-containing protein 7 |
NM_001304366.1 | NP_001291295.1 | sterile alpha motif domain-containing protein 7 |
NM_182610.4 | NP_872416.1 | sterile alpha motif domain-containing protein 7 |
Autosomal recessive retinitis pigmentosa with homozygous rhodopsin mutation E150K and non-coding cis-regulatory variants in CRX-binding regions of SAMD7.
Van Schil K, Karlstetter M, Aslanidis A, Dannhausen K, Azam M, Qamar R, Leroy BP, Depasse F, Langmann T, De Baere E
Scientific reports621307(2016 Feb)
Sterile alpha motif containing 7 (samd7) is a novel crx-regulated transcriptional repressor in the retina.
Hlawatsch J, Karlstetter M, Aslanidis A, L?ckoff A, Walczak Y, Plank M, B?ck J, Langmann T
PloS one8(4)e60633(2013)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Autosomal recessive retinitis pigmentosa with homozygous rhodopsin mutation E150K and non-coding cis-regulatory variants in CRX-binding regions of SAMD7.
Title: Autosomal recessive retinitis pigmentosa with homozygous rhodopsin mutation E150K and non-coding cis-regulatory variants in CRX-binding regions of SAMD7.
Data have identified a novel retinal SAM domain protein, Samd7, which could act as a transcriptional repressor involved in fine-tuning of Crx-regulated gene expression.
Title: Sterile alpha motif containing 7 (samd7) is a novel crx-regulated transcriptional repressor in the retina.
The following SAMD7 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SAMD7 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu30560 | |
Clone ID Related Accession (Same CDS sequence) | NM_001304366.2 , XM_011512752.1 , NM_182610.3 , NM_001304366.1 , NM_182610.4 | |
Accession Version | NM_001304366.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1341bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-06-01 | |
Organism | Homo sapiens(human) | |
Product | sterile alpha motif domain-containing protein 7 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL711948.1, BX648534.1, AC008040.7 and BX648991.1. On Jun 2, 2019 this sequence version replaced NM_001304366.1. Transcript Variant: This variant (1) represents the shortest transcript and encodes the functional protein. Variants 1 and 2 encode the same protein. ##Evidence-Data-START## Transcript exon combination :: BX648991.1, BX648534.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1968968 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on conservation, expression, longest protein ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTGTGA ACCCTTTATT GACACCAACA GGGCAGCAGA CAATCCCACT GATCCCCTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001291295.1 |
CDS | 367..1707 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001304366.2 |
1 | ATGGCTGTGA ACCCTTTATT GACACCAACA GGGCAGCAGA CAATCCCACT GATCCCCTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu30560 | |
Clone ID Related Accession (Same CDS sequence) | NM_001304366.2 , XM_011512752.1 , NM_182610.3 , NM_001304366.1 , NM_182610.4 | |
Accession Version | NM_182610.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1341bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-29 | |
Organism | Homo sapiens(human) | |
Product | sterile alpha motif domain-containing protein 7 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL711948.1, BX537903.1, AC008040.7 and BX648991.1. On Jan 21, 2015 this sequence version replaced NM_182610.2. Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same protein. ##Evidence-Data-START## Transcript exon combination :: BX648989.1, BX537903.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1968968 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTGTGA ACCCTTTATT GACACCAACA GGGCAGCAGA CAATCCCACT GATCCCCTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_872416.1 |
CDS | 390..1730 |
Translation |
Target ORF information:
Target ORF information:
|
NM_182610.3 |
1 | ATGGCTGTGA ACCCTTTATT GACACCAACA GGGCAGCAGA CAATCCCACT GATCCCCTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu30560 | |
Clone ID Related Accession (Same CDS sequence) | NM_001304366.2 , XM_011512752.1 , NM_182610.3 , NM_001304366.1 , NM_182610.4 | |
Accession Version | NM_001304366.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1341bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-29 | |
Organism | Homo sapiens(human) | |
Product | sterile alpha motif domain-containing protein 7 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL711948.1, BX648534.1, AC008040.7 and BX648991.1. On Jan 21, 2015 this sequence version replaced XM_005247422.1. Transcript Variant: This variant (1) represents the shortest transcript and encodes the functional protein. Variants 1 and 2 encode the same protein. ##Evidence-Data-START## Transcript exon combination :: BX648991.1, BX648534.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1968968 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTGTGA ACCCTTTATT GACACCAACA GGGCAGCAGA CAATCCCACT GATCCCCTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001291295.1 |
CDS | 367..1707 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001304366.1 |
1 | ATGGCTGTGA ACCCTTTATT GACACCAACA GGGCAGCAGA CAATCCCACT GATCCCCTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu30560 | |
Clone ID Related Accession (Same CDS sequence) | NM_001304366.2 , XM_011512752.1 , NM_182610.3 , NM_001304366.1 , NM_182610.4 | |
Accession Version | NM_182610.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1341bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-06-01 | |
Organism | Homo sapiens(human) | |
Product | sterile alpha motif domain-containing protein 7 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL711948.1, BX537903.1, AC008040.7 and BX648991.1. On Jun 2, 2019 this sequence version replaced NM_182610.3. Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same protein. ##Evidence-Data-START## Transcript exon combination :: BX537903.1, BX648989.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1965299, SAMEA1968968 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTGTGA ACCCTTTATT GACACCAACA GGGCAGCAGA CAATCCCACT GATCCCCTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_872416.1 |
CDS | 390..1730 |
Translation |
Target ORF information:
Target ORF information:
|
NM_182610.4 |
1 | ATGGCTGTGA ACCCTTTATT GACACCAACA GGGCAGCAGA CAATCCCACT GATCCCCTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu30560 | |
Clone ID Related Accession (Same CDS sequence) | NM_001304366.2 , XM_011512752.1 , NM_182610.3 , NM_001304366.1 , NM_182610.4 | |
Accession Version | XM_011512752.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1341bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-03-11 | |
Organism | Homo sapiens(Human) | |
Product | sterile alpha motif domain-containing protein 7 isoform X1 | |
Comment |
1 | ATGGCTGTGA ACCCTTTATT GACACCAACA GGGCAGCAGA CAATCCCACT GATCCCCTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011511054.1 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011512752.1 |
1 | ATGGCTGTGA ACCCTTTATT GACACCAACA GGGCAGCAGA CAATCCCACT GATCCCCTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Autosomal recessive retinitis pigmentosa with homozygous rhodopsin mutation E150K and non-coding cis-regulatory variants in CRX-binding regions of SAMD7. |
Sterile alpha motif containing 7 (samd7) is a novel crx-regulated transcriptional repressor in the retina. |