Gene Symbol | XKR5 |
Entrez Gene ID | 389610 |
Full Name | XK related 5 |
Synonyms | HARL2754,UNQ2754,XRG5A,XRG5BM |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
ORF » Species Summary » Homo sapiens » XKR5 cDNA ORF clone
Gene Symbol | XKR5 |
Entrez Gene ID | 389610 |
Full Name | XK related 5 |
Synonyms | HARL2754,UNQ2754,XRG5A,XRG5BM |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_207411.4 | NP_997294.3 | XK-related protein 5 isoform a |
XM_011534750.2 | XP_011533052.1 | XK-related protein 5 isoform X3 |
NM_001289973.1 | NP_001276902.1 | XK-related protein 5 isoform b |
XM_011534750.3 | XP_011533052.1 | XK-related protein 5 isoform X3 |
XM_017013401.1 | XP_016868890.1 | XK-related protein 5 isoform X1 |
NM_001289973.2 | NP_001276902.1 | XK-related protein 5 isoform b |
NM_207411.5 | NP_997294.3 | XK-related protein 5 isoform a |
XM_017013402.1 | XP_016868891.1 | XK-related protein 5 isoform X2 |
Bos taurus (cattle) | XKR5 | XP_003587980.1 |
Rattus norvegicus (Norway rat) | Xkr5 | NP_001012228.1 |
LOC716883 | XP_001098341.2 | |
Mus musculus (house mouse) | Xkr5 | NP_001106821.1 |
Danio rerio (zebrafish) | LOC100000884 | XP_001340990.2 |
Danio rerio (zebrafish) | xrg5 | NP_001012260.1 |
Xenopus tropicalis (tropical clawed frog) | xkr5 | NP_001029114.1 |
Homo sapiens (human) | XKR5 | NP_997294.3 |
Pan troglodytes (chimpanzee) | XKR5 | NP_001028207.1 |
Canis lupus familiaris (dog) | XKR5 | XP_540057.3 |
The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment.
Clark HF, Gurney AL, Abaya E, Baker K, Baldwin D, Brush J, Chen J, Chow B, Chui C, Crowley C, Currell B, Deuel B, Dowd P, Eaton D, Foster J, Grimaldi C, Gu Q, Hass PE, Heldens S, Huang A, Kim HS, Klimowski L, Jin Y, Johnson S, Lee J, Lewis L, Liao D, Mark M, Robbie E, Sanchez C, Schoenfeld J, Seshagiri S, Simmons L, Singh J, Smith V, Stinson J, Vagts A, Vandlen R, Watanabe C, Wieand D, Woods K, Xie MH, Yansura D, Yi S, Yu G, Yuan J, Zhang M, Zhang Z, Goddard A, Wood WI, Godowski P, Gray A
Genome research13(10)2265-70(2003 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following XKR5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the XKR5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu00878 | |
Clone ID Related Accession (Same CDS sequence) | NM_001289973.1 , NM_001289973.2 | |
Accession Version | NM_001289973.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1572bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-29 | |
Organism | Homo sapiens(human) | |
Product | XK-related protein 5 isoform b | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AY534242.1, AY534243.1 and AF233439.7. Transcript Variant: This variant (2) differs in its 5' UTR and initiates translation from a downstream in-frame start codon, compared to variant 1. The encoded isoform (b) is shorter at the N-terminus, compared to isoform a. ##Evidence-Data-START## Transcript exon combination :: AY534243.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2154529, SAMN03267767 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGGCTTCA TGAAGCCAGG CCACCTGGCC ATGCCATGGG CCGCCCTCTT CTGCCAGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001276902.1 |
CDS | 779..2350 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001289973.1 |
1 | ATGGGCTTCA TGAAGCCAGG CCACCTGGCC ATGCCATGGG CCGCCCTCTT CTGCCAGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu00878 | |
Clone ID Related Accession (Same CDS sequence) | NM_001289973.1 , NM_001289973.2 | |
Accession Version | NM_001289973.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1572bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-30 | |
Organism | Homo sapiens(human) | |
Product | XK-related protein 5 isoform b | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AY534242.1, AY534243.1 and AF233439.7. On May 31, 2019 this sequence version replaced NM_001289973.1. Transcript Variant: This variant (2) differs in its 5' UTR and initiates translation from a downstream in-frame start codon, compared to variant 1. The encoded isoform (b) is shorter at the N-terminus, compared to isoform a. ##Evidence-Data-START## Transcript exon combination :: AY534243.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2154529, SAMN03267767 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGGCTTCA TGAAGCCAGG CCACCTGGCC ATGCCATGGG CCGCCCTCTT CTGCCAGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001276902.1 |
CDS | 659..2230 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001289973.2 |
1 | ATGGGCTTCA TGAAGCCAGG CCACCTGGCC ATGCCATGGG CCGCCCTCTT CTGCCAGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu03145 | |
Clone ID Related Accession (Same CDS sequence) | NM_207411.4 , NM_207411.5 | |
Accession Version | NM_207411.4 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2061bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-23 | |
Organism | Homo sapiens(human) | |
Product | XK-related protein 5 isoform a | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AY534242.1 and AY534243.1. On Dec 30, 2009 this sequence version replaced NM_207411.3. Transcript Variant: This variant (1) represents the shorter transcript but encodes the longer isoform (a). ##Evidence-Data-START## Transcript exon combination :: AY534242.1, AY358489.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2154529 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCACGCGA GGCTCCTGGG GCTCTCGGCC CTGCTGCAGG CGGCCGAGCA GAGCGCGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_997294.3 |
CDS | 152..2212 |
Translation |
Target ORF information:
Target ORF information:
|
NM_207411.4 |
1 | ATGCACGCGA GGCTCCTGGG GCTCTCGGCC CTGCTGCAGG CGGCCGAGCA GAGCGCGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu03145 | |
Clone ID Related Accession (Same CDS sequence) | NM_207411.4 , NM_207411.5 | |
Accession Version | NM_207411.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2061bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-25 | |
Organism | Homo sapiens(human) | |
Product | XK-related protein 5 isoform a | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AY534242.1 and AY534243.1. On May 17, 2019 this sequence version replaced NM_207411.4. Transcript Variant: This variant (1) represents the shorter transcript but encodes the longer isoform (a). ##Evidence-Data-START## Transcript exon combination :: AY534242.1, AY358489.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2154529 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000618742.3/ ENSP00000483879.1 RefSeq Select criteria :: based on conservation, expression ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCACGCGA GGCTCCTGGG GCTCTCGGCC CTGCTGCAGG CGGCCGAGCA GAGCGCGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_997294.3 |
CDS | 32..2092 |
Translation |
Target ORF information:
Target ORF information:
|
NM_207411.5 |
1 | ATGCACGCGA GGCTCCTGGG GCTCTCGGCC CTGCTGCAGG CGGCCGAGCA GAGCGCGCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu80011 | |
Clone ID Related Accession (Same CDS sequence) | XM_011534750.2 , XM_011534750.3 | |
Accession Version | XM_011534750.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1251bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | XK-related protein 5 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000008.11) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_011534750.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGTTGG AGAACATCAT CCTGTTGCTG TTGGCCACCG ACTTTCTCCA GGGGGCATCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011533052.1 |
CDS | 1468..2718 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011534750.2 |
1 | ATGCTGTTGG AGAACATCAT CCTGTTGCTG TTGGCCACCG ACTTTCTCCA GGGGGCATCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu80011 | |
Clone ID Related Accession (Same CDS sequence) | XM_011534750.2 , XM_011534750.3 | |
Accession Version | XM_011534750.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1251bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | XK-related protein 5 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000008.11) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Mar 26, 2018 this sequence version replaced XM_011534750.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGTTGG AGAACATCAT CCTGTTGCTG TTGGCCACCG ACTTTCTCCA GGGGGCATCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011533052.1 |
CDS | 1449..2699 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011534750.3 |
1 | ATGCTGTTGG AGAACATCAT CCTGTTGCTG TTGGCCACCG ACTTTCTCCA GGGGGCATCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu97963 | |
Clone ID Related Accession (Same CDS sequence) | XM_017013401.1 | |
Accession Version | XM_017013401.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2067bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | XK-related protein 5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000008.11) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAGGTAC CCAGTCTCAC TCCAGCCTTC CAACAACCTG CTTGCCTTTC CCCTTCTCAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016868890.1 |
CDS | 565..2631 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017013401.1 |
1 | ATGCAGGTAC CCAGTCTCAC TCCAGCCTTC CAACAACCTG CTTGCCTTTC CCCTTCTCAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu97964 | |
Clone ID Related Accession (Same CDS sequence) | XM_017013402.1 | |
Accession Version | XM_017013402.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1857bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | XK-related protein 5 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000008.11) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAGGTAC CCAGTCTCAC TCCAGCCTTC CAACAACCTG CTTGCCTTTC CCCTTCTCAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016868891.1 |
CDS | 567..2423 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017013402.1 |
1 | ATGCAGGTAC CCAGTCTCAC TCCAGCCTTC CAACAACCTG CTTGCCTTTC CCCTTCTCAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. |