Gene Symbol | UTP18 |
Entrez Gene ID | 51096 |
Full Name | UTP18, small subunit processome component |
Synonyms | CGI-48,WDR50 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome | |
Disorder MIM: |
ORF » Species Summary » Homo sapiens » UTP18 cDNA ORF clone
gRNAs
Gene Symbol | UTP18 |
Entrez Gene ID | 51096 |
Full Name | UTP18, small subunit processome component |
Synonyms | CGI-48,WDR50 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome | |
Disorder MIM: |
mRNA | Protein | Name |
---|---|---|
NM_016001.2 | NP_057085.2 | U3 small nucleolar RNA-associated protein 18 homolog |
XM_011524870.2 | XP_011523172.1 | U3 small nucleolar RNA-associated protein 18 homolog isoform X2 |
NM_016001.3 | NP_057085.2 | U3 small nucleolar RNA-associated protein 18 homolog |
XM_006721930.3 | XP_006721993.2 | U3 small nucleolar RNA-associated protein 18 homolog isoform X1 |
Homo sapiens (human) | UTP18 | NP_057085.2 |
Bos taurus (cattle) | UTP18 | NP_001092349.1 |
Gallus gallus (chicken) | UTP18 | XP_003642362.2 |
UTP18 | XP_001096494.1 | |
Rattus norvegicus (Norway rat) | Utp18 | NP_001128511.1 |
Arabidopsis thaliana (thale cress) | AT5G14050 | NP_196909.1 |
Canis lupus familiaris (dog) | UTP18 | XP_005624739.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP009046 | XP_319798.2 |
Oryza sativa (rice) | Os07g0603200 | NP_001060211.1 |
Pan troglodytes (chimpanzee) | UTP18 | XP_001159780.2 |
Mus musculus (house mouse) | Utp18 | NP_001013393.1 |
Danio rerio (zebrafish) | utp18 | NP_001070232.1 |
Drosophila melanogaster (fruit fly) | wcd | NP_611121.1 |
Xenopus tropicalis (tropical clawed frog) | utp18 | NP_001016635.1 |
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J, Hentze MW
Cell149(6)1393-406(2012 Jun)
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Baltz AG, Munschauer M, Schwanh?usser B, Vasile A, Murakawa Y, Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E, Bonneau R, Selbach M, Dieterich C, Landthaler M
Molecular cell46(5)674-90(2012 Jun)
A probability-based approach for high-throughput protein phosphorylation analysis and site localization.
Beausoleil SA, Vill?n J, Gerber SA, Rush J, Gygi SP
Nature biotechnology24(10)1285-92(2006 Oct)
The small-subunit processome is a ribosome assembly intermediate.
Bernstein KA, Gallagher JE, Mitchell BM, Granneman S, Baserga SJ
Eukaryotic cell3(6)1619-26(2004 Dec)
Large-scale characterization of HeLa cell nuclear phosphoproteins.
Beausoleil SA, Jedrychowski M, Schwartz D, Elias JE, Vill?n J, Li J, Cohn MA, Cantley LC, Gygi SP
Proceedings of the National Academy of Sciences of the United States of America101(33)12130-5(2004 Aug)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following UTP18 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the UTP18 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu30177![]() |
|
Clone ID Related Accession (Same CDS sequence) | NM_016001.2 , NM_016001.3 | |
Accession Version | NM_016001.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1671bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-01 | |
Organism | Homo sapiens(human) | |
Product | U3 small nucleolar RNA-associated protein 18 homolog | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BG723023.1, BC025276.1, AY007138.1 and BM548967.1. On Nov 23, 2006 this sequence version replaced NM_016001.1. ##Evidence-Data-START## Transcript exon combination :: SRR1163657.355538.1, SRR1163655.314700.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCCGCCGG AGCGGAGGAG ACGAATGAAA CTGGACCGGA GAACCGGAGC GAAGCCGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_057085.2 |
CDS | 50..1720 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCGCCGG AGCGGAGGAG ACGAATGAAA CTGGACCGGA GAACCGGAGC GAAGCCGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu30177![]() |
|
Clone ID Related Accession (Same CDS sequence) | NM_016001.2 , NM_016001.3 | |
Accession Version | NM_016001.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1671bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-01 | |
Organism | Homo sapiens(human) | |
Product | U3 small nucleolar RNA-associated protein 18 homolog | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BG723023.1, BC025276.1, AY007138.1 and BM548967.1. On Nov 22, 2018 this sequence version replaced NM_016001.2. ##Evidence-Data-START## Transcript exon combination :: SRR3476690.274086.1, SRR3476690.838089.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000225298.12/ ENSP00000225298.7 RefSeq Select criteria :: based on conservation, expression, longest protein ##RefSeq-Attributes-END## COMPLETENESS: full length. |
1 | ATGCCGCCGG AGCGGAGGAG ACGAATGAAA CTGGACCGGA GAACCGGAGC GAAGCCGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_057085.2 |
CDS | 40..1710 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCGCCGG AGCGGAGGAG ACGAATGAAA CTGGACCGGA GAACCGGAGC GAAGCCGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu67651 | |
Clone ID Related Accession (Same CDS sequence) | XM_006721930.3 | |
Accession Version | XM_006721930.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1605bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | U3 small nucleolar RNA-associated protein 18 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000017.11) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_006721930.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCGCCGG AGCGGAGGAG ACGAATGAAA CTGGACCGGA GAACCGGAGC GAAGCCGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006721993.2 |
CDS | 29..1633 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCGCCGG AGCGGAGGAG ACGAATGAAA CTGGACCGGA GAACCGGAGC GAAGCCGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu67652 | |
Clone ID Related Accession (Same CDS sequence) | XM_011524870.2 | |
Accession Version | XM_011524870.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1545bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | U3 small nucleolar RNA-associated protein 18 homolog isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000017.11) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_011524870.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCGCCGG AGCGGAGGAG ACGAATGAAA CTGGACCGGA GAACCGGAGC GAAGCCGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011523172.1 |
CDS | 29..1573 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCGCCGG AGCGGAGGAG ACGAATGAAA CTGGACCGGA GAACCGGAGC GAAGCCGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. |
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. |
A probability-based approach for high-throughput protein phosphorylation analysis and site localization. |
The small-subunit processome is a ribosome assembly intermediate. |
Large-scale characterization of HeLa cell nuclear phosphoproteins. |