Gene Symbol | YIPF4 |
Entrez Gene ID | 84272 |
Full Name | Yip1 domain family member 4 |
Synonyms | FinGER4,Nbla11189 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome | |
Disorder MIM: |
ORF » Species Summary » Homo sapiens » YIPF4 cDNA ORF clone
Gene Symbol | YIPF4 |
Entrez Gene ID | 84272 |
Full Name | Yip1 domain family member 4 |
Synonyms | FinGER4,Nbla11189 |
General protein information |
|
Gene Type | protein-coding |
Organism | Homo sapiens(human) |
Genome | |
Disorder MIM: |
mRNA | Protein | Name |
---|---|---|
XM_011533125.2 | XP_011531427.1 | protein YIPF4 isoform X1 |
XM_011533125.3 | XP_011531427.1 | protein YIPF4 isoform X1 |
XM_005264599.4 | XP_005264656.1 | protein YIPF4 isoform X2 |
XM_005264599.3 | XP_005264656.1 | protein YIPF4 isoform X2 |
XM_024453173.1 | XP_024308941.1 | protein YIPF4 isoform X3 |
NM_032312.3 | NP_115688.1 | protein YIPF4 |
NM_032312.4 | NP_115688.1 | protein YIPF4 |
Homo sapiens (human) | YIPF4 | NP_115688.1 |
Bos taurus (cattle) | YIPF4 | XP_002691265.2 |
Caenorhabditis elegans (roundworm) | CELE_Y60A3A.19 | NP_001123056.1 |
YIPF4 | XP_001106365.1 | |
Mus musculus (house mouse) | Yipf4 | NP_080693.2 |
Rattus norvegicus (Norway rat) | Yipf4 | NP_001009712.1 |
Canis lupus familiaris (dog) | YIPF4 | XP_532925.1 |
Gallus gallus (chicken) | YIPF4 | NP_001026229.1 |
Pan troglodytes (chimpanzee) | YIPF4 | NP_001233298.1 |
Danio rerio (zebrafish) | yipf4 | NP_998056.1 |
Architecture of the human interactome defines protein communities and disease networks.
Huttlin EL, Bruckner RJ, Paulo JA, Cannon JR, Ting L, Baltier K, Colby G, Gebreab F, Gygi MP, Parzen H, Szpyt J, Tam S, Zarraga G, Pontano-Vaites L, Swarup S, White AE, Schweppe DK, Rad R, Erickson BK, Obar RA, Guruharsha KG, Li K, Artavanis-Tsakonas S, Gygi SP, Harper JW
Nature545(7655)505-509(2017 05)
Functional characterisation of the YIPF protein family in mammalian cells.
Kranjc T, Dempsey E, Cagney G, Nakamura N, Shields DC, Simpson JC
Histochemistry and cell biology147(4)439-451(2017 Apr)
YIP1 family member 4 (YIPF4) is a novel cellular binding partner of the papillomavirus E5 proteins.
M?ller M, Wasson CW, Bhatia R, Boxall S, Millan D, Goh GY, Haas J, Stonehouse NJ, Macdonald A
Scientific reports512523(2015 Aug)
Characterization of YIPF3 and YIPF4, cis-Golgi Localizing Yip domain family proteins.
Tanimoto K, Suzuki K, Jokitalo E, Sakai N, Sakaguchi T, Tamura D, Fujii G, Aoki K, Takada S, Ishida R, Tanabe M, Itoh H, Yoneda Y, Sohda M, Misumi Y, Nakamura N
Cell structure and function36(2)171-85(2011)
Neuroblastoma oligo-capping cDNA project: toward the understanding of the genesis and biology of neuroblastoma.
Ohira M, Morohashi A, Nakamura Y, Isogai E, Furuya K, Hamano S, Machida T, Aoyama M, Fukumura M, Miyazaki K, Suzuki Y, Sugano S, Hirato J, Nakagawara A
Cancer letters197(1-2)63-8(2003 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The significance of YIPF4 protein for the maintenance of the morphology of the Golgi was tested by RNA interference, revealing a number of specific morphological changes to this organelle on their depletion.
Title: Functional characterisation of the YIPF protein family in mammalian cells.
YIPF4 is a binding partner of the papillomavirus E5 proteins.
Title: YIP1 family member 4 (YIPF4) is a novel cellular binding partner of the papillomavirus E5 proteins.
YIPF4 was detected as a single mobility form consistent with its predicted molecular weight, three different mobility forms of YIPF3 were detected by western blotting.
Title: Characterization of YIPF3 and YIPF4, cis-Golgi Localizing Yip domain family proteins.
The following YIPF4 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the YIPF4 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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CloneID | OHu31501 | |
Clone ID Related Accession (Same CDS sequence) | NM_032312.3 , NM_032312.4 | |
Accession Version | NM_032312.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 735bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-01 | |
Organism | Homo sapiens(human) | |
Product | protein YIPF4 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BP207600.1, BC004875.2, AL121653.2 and BU608699.1. On Nov 7, 2008 this sequence version replaced NM_032312.2. ##Evidence-Data-START## Transcript exon combination :: SRR1163655.106140.1, SRR1660803.244706.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCAGCCTC CGGGCCCGCC CCCGGCCTAT GCCCCCACTA ACGGGGACTT CACCTTTGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_115688.1 |
CDS | 268..1002 |
Translation |
Target ORF information:
Target ORF information:
|
NM_032312.3 |
1 | ATGCAGCCTC CGGGCCCGCC CCCGGCCTAT GCCCCCACTA ACGGGGACTT CACCTTTGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu31501 | |
Clone ID Related Accession (Same CDS sequence) | NM_032312.3 , NM_032312.4 | |
Accession Version | NM_032312.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 735bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-09 | |
Organism | Homo sapiens(human) | |
Product | protein YIPF4 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BP207600.1, BC004875.2, AL121653.2, BU608699.1 and AL133245.4. On Nov 22, 2018 this sequence version replaced NM_032312.3. ##Evidence-Data-START## Transcript exon combination :: SRR1660807.168893.1, SRR1660807.155128.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000238831.9/ ENSP00000238831.3 RefSeq Select criteria :: based on conservation, expression, longest protein ##RefSeq-Attributes-END## COMPLETENESS: full length. |
1 | ATGCAGCCTC CGGGCCCGCC CCCGGCCTAT GCCCCCACTA ACGGGGACTT CACCTTTGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_115688.1 |
CDS | 253..987 |
Translation |
Target ORF information:
Target ORF information:
|
NM_032312.4 |
1 | ATGCAGCCTC CGGGCCCGCC CCCGGCCTAT GCCCCCACTA ACGGGGACTT CACCTTTGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu35630 | |
Clone ID Related Accession (Same CDS sequence) | XM_005264599.4 , XM_005264599.3 | |
Accession Version | XM_005264599.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 645bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | protein YIPF4 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000002.12) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 26, 2018 this sequence version replaced XM_005264599.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAGCCTC CGGGCCCGCC CCCGGCCTAT GCCCCCACTA ACGGGGACTT CACCTTTGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005264656.1 |
CDS | 253..897 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005264599.4 |
1 | ATGCAGCCTC CGGGCCCGCC CCCGGCCTAT GCCCCCACTA ACGGGGACTT CACCTTTGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu35630 | |
Clone ID Related Accession (Same CDS sequence) | XM_005264599.4 , XM_005264599.3 | |
Accession Version | XM_005264599.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 645bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | protein YIPF4 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000002.12) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_005264599.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAGCCTC CGGGCCCGCC CCCGGCCTAT GCCCCCACTA ACGGGGACTT CACCTTTGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005264656.1 |
CDS | 262..906 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005264599.3 |
1 | ATGCAGCCTC CGGGCCCGCC CCCGGCCTAT GCCCCCACTA ACGGGGACTT CACCTTTGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu73480 | |
Clone ID Related Accession (Same CDS sequence) | XM_011533125.2 , XM_011533125.3 | |
Accession Version | XM_011533125.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 657bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-05 | |
Organism | Homo sapiens(human) | |
Product | protein YIPF4 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000002.12) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_011533125.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAGCCTC CGGGCCCGCC CCCGGCCTAT GCCCCCACTA ACGGGGACTT CACCTTTGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011531427.1 |
CDS | 262..918 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011533125.2 |
1 | ATGCAGCCTC CGGGCCCGCC CCCGGCCTAT GCCCCCACTA ACGGGGACTT CACCTTTGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu73480 | |
Clone ID Related Accession (Same CDS sequence) | XM_011533125.2 , XM_011533125.3 | |
Accession Version | XM_011533125.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 657bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | protein YIPF4 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000002.12) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 26, 2018 this sequence version replaced XM_011533125.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAGCCTC CGGGCCCGCC CCCGGCCTAT GCCCCCACTA ACGGGGACTT CACCTTTGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011531427.1 |
CDS | 253..909 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011533125.3 |
1 | ATGCAGCCTC CGGGCCCGCC CCCGGCCTAT GCCCCCACTA ACGGGGACTT CACCTTTGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHu104984 | |
Clone ID Related Accession (Same CDS sequence) | XM_024453173.1 | |
Accession Version | XM_024453173.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 567bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-05 | |
Organism | Homo sapiens(human) | |
Product | protein YIPF4 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000002.12) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAGCCTC CGGGCCCGCC CCCGGCCTAT GCCCCCACTA ACGGGGACTT CACCTTTGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024308941.1 |
CDS | 253..819 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024453173.1 |
1 | ATGCAGCCTC CGGGCCCGCC CCCGGCCTAT GCCCCCACTA ACGGGGACTT CACCTTTGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Architecture of the human interactome defines protein communities and disease networks. |
Functional characterisation of the YIPF protein family in mammalian cells. |
YIP1 family member 4 (YIPF4) is a novel cellular binding partner of the papillomavirus E5 proteins. |
Characterization of YIPF3 and YIPF4, cis-Golgi Localizing Yip domain family proteins. |
Neuroblastoma oligo-capping cDNA project: toward the understanding of the genesis and biology of neuroblastoma. |