SCAL cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol SCAL

Entrez Gene ID 5072516

Full Name phosphoglycan beta 1,2 arabinosyltransferase,(SCA like)

Gene Type protein-coding

Organism Leishmania infantum JPCM5
mRNA and Protein(s)

mRNA Protein Name

XM_001468403.1 XP_001468440.1 phosphoglycan beta 1,2 arabinosyltransferase,(SCA like)
Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

mRNA	Protein	Name
XM_001468403.1	XP_001468440.1	phosphoglycan beta 1,2 arabinosyltransferase,(SCA like)

The following SCAL gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SCAL cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc05799	XM_001468403.1 Latest version!	Leishmania infantum JPCM5 phosphoglycan beta 1,2 arabinosyltransferase,(SCA like) (SCAL), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$510.30 $729.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

SCAL ( XM_001468403.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001468440.1 Leishmania infantum JPCM5 phosphoglycan beta 1,2 arabinosyltransferase,(SCA like) (SCAL), partial mRNA.

Price & Availability↑

CloneID	OLc05799
Clone ID Related Accession (Same CDS sequence)	XM_001468403.1
Accession Version	XM_001468403.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2706bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-07-15
Organism	Leishmania infantum JPCM5
Product	phosphoglycan beta 1,2 arabinosyltransferase,(SCA like)
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009418). COMPLETENESS: incomplete on both ends.

ATGCAGGACA CTGCTTCACC CTTTCCCCAC CACCGTACGC CGGCGACGTA CCAGGCCGGC 
TTGCATTATC AGGCCAACGG ACGCGAAAGC GCGGCGCCGC TGCTTACCTC GTCGGCTGGA 
AATGCTGCCA ACGGTAAGCG GCTCAGTCAC TGGGGCCGCA ACGTTTTGCG TGGCTTTTAC 
CATGTCAAAT GGCATCAGCG CACGCAGTGT GCCGTTGTAG CGTGCTTGCT GTGGTTCTTC 
ACCCTTTTTG TGCTCCTGCA CACTTTTCTT CAGGTGTCGG GTCTGACGCA GTCGATTTAT 
GCGGTTTTCT CGAGGCCGAC TTCCGGGCTG CAAACACTCC TGGAGGACGA GCTCGTTATA 
CCTAGCCCTG TTGTGCCACC GAATGGAGCA TTTTGTGGTC TGTGTACAGA GGGCCTCGTT 
GTCTTCCGTC CAGCTAGTGC CGCCACATCC CTGGCTACGA CGCCTGCCCA GACCGAGATG 
GTAGTGTGCG TGGAAACGAT GGAGGAAGCC TGGTTGTCAG CGAGCGAGTC GGAGCCTCTA 
AGCACTGTAC GAGACTGTGT AGCAAGGCTC TATAACCTGG GTCTCCTGCA GCCTCCTCGT 
ACTACCATAA CCGCGGTGAA TGACACGTGT GCAGCAGTGC GCGTGACAGT GCAGGTGCTC 
TCAGGCGAGT CAGAAGAGGC AGATCGGAAC AAGTGCAGCA GCGGGTTCGT GGCGGAGCTG 
CAGATTTCAT CGACAGAACG GGAGAAGGTG GAGGTGCACA CTCAGCGGTT CCCGTCGTGG 
CCGCTCTGCC CTGTCGCCTC ACCGGAGGCT ATTGATGCTA AGGATGGACA CCGAGGTGGC 
AGTGACGGTA ATCATTACAT CGTGCCCGCG TACTTTGCGA CAGCAGCTGT TCGAGACACA 
GACGCAGACT GCGATGTCCC ACCGCCGTGG AGAATTGACA CTATCGAGGA CCTTGATGAG 
GTGGTACTGC GTTTCGCCGG GGACGCGGCT CAGACCACAG AGACATCGCC GCTGCTGGCG 
AGTGACCTGC GCTGCCCGAC CTACTTCCTC ACGGTACACC TTGGCCGCTT TGGCCGCCAT 
CACAATCAGC TGCAGGAGAT CTTGAACGGC ATCTCGCTGG CCAGGAGATC GAACCGCACG 
TTTATTTTGC CACCCTTTGT GCCGGCGCTG TACATGTCGT ACTTGAGGCT AAATCCAGAG 
CTTCTGTACG GATGGAATGC GCTACGCAGA AACGGCCACT ACTGTGTTCT GTCGTACGCC 
GAGGCGCGGC CAATACTGCG GCGTCTGCGT GAGCGCGATG GGGTAGTGAG TATGGAACGG 
GTCAGTTTTG CAGCCACTGC CGACCTGCAC GTGCTGTTCA ACACCACAGA AGAGCACGAC 
AGTTATGCTT GGGGATCCAT GCCTCGCGTG CCGGACACGG ATGGCGCGTT TGTGTACGAT 
GCAGATGAAT GGTTCTCGAT GGGGGTGCGG CGAAGGGAGG AGATGACAGC GCACACCGCA 
AGCAATACCT CATCAGTGCC ATCGCCGCTA ACGTTCCACG AGGCAAGGCC GCCTAGCGCG 
GAGGAGTGTA GCGGCTTCGC CGGCCCCGCT CCGAACAAGA GCCCAACGCA GTGGGAAAGG 
ATTCGCAGGT GCACCACTGC GTTTCTGCGC ACCTACGGCG ATGGTGACGG GAGACGCGAG 
TCGTCGTTAG CCTCACGGCG ACAGCCACGC ATTGTGGTGA TTTCGAGCGT CACAGCGTTT 
CATCTGCGGC CGACGCTGAC GGAAATGACC AGGCTGCTTG GCCTCCTGCG GCCGTCACCG 
ACACTCACGG TGGAGATTGG CCGGTACTAC CGACTCTATG CGACGCAGCT CCAGTGGCCA 
GCCAACACCG ATCCGAAGCG CTCTTTTTTA AACGTGCTGC AGCCATTTCG TTACAAGAGC 
ACCATTGGTG TGCACGTACG CCGTCGCGAG TTTACGTGTC GCGAGGAGGC CGAGCACCCC 
AGCGCCACCA TCATCGCTAT GTCGGAGGCG CGCTACCAGT TTGACGGCAC AGGTAAAAAC 
GATAGCGCCG CTGCTGGTCG CCCCATCACC ACCGTAGCGC GACTGGCGAG CGACTGCGGA 
TGGAATTCGC AGTCGCTACT GCACATCTAC GACACCTATG CGAGCTGGAT GCGATCGCGA 
CAGGCGCAGG GGCTGAGGCG GTCGCGTTGC TTCGCGCATG TGCAGACTTC AAACAAACAG 
GTGCTGCGGA GCTACGTCGC CTTTGACGAG CAAGTCGGCC CCATTGGCTC TCAGCTGCAA 
GCTGCACTGC AGCAGCGCTA CAACCCACTA AAGAAGAAGC GCGCCGCCAA TGGATATCCA 
CCCATCTATG CCGCATTCTA CGACCACCGG CCCCGCAAAG ACCTTTTCCA GACTTACCAA 
GAAATCCCGG CAAGATGGGA GCATTCATCC GCAGACACGC AACGCGCCGA CGGGGAAGCC 
GTCTTCGACG TCGCTGCTGT ACCGCGGACA ACGGACAGTC TTGTTGAGAT GTTGTACCCC 
ATCGCGGAGC AGGAGGCGCT GGCCCTGGGG ATCGACTTCT TTGTGCTCGG TAACACAGGC 
GTGTTCCGCG GCAATATTAT TTCGTCCGTG TCGATCAACG TGTGCTTGCG CCGCTTGGGC 
AGAGGGCTGC CGTGTCACGG CGTCCTCGCT GGGTACTACG AAATGCTGTA CAAGGGTTAC 
ATGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001468440.1
CDS	1..2706
Translation	MQDTASPFPHHRTPATYQAGLHYQANGRESAAPLLTSSAGNAANGKRLSHWGRNVLRGFYHVKWHQRTQCAVVACLLWFFTLFVLLHTFLQVSGLTQSIYAVFSRPTSGLQTLLEDELVIPSPVVPPNGAFCGLCTEGLVVFRPASAATSLATTPAQTEMVVCVETMEEAWLSASESEPLSTVRDCVARLYNLGLLQPPRTTITAVNDTCAAVRVTVQVLSGESEEADRNKCSSGFVAELQISSTEREKVEVHTQRFPSWPLCPVASPEAIDAKDGHRGGSDGNHYIVPAYFATAAVRDTDADCDVPPPWRIDTIEDLDEVVLRFAGDAAQTTETSPLLASDLRCPTYFLTVHLGRFGRHHNQLQEILNGISLARRSNRTFILPPFVPALYMSYLRLNPELLYGWNALRRNGHYCVLSYAEARPILRRLRERDGVVSMERVSFAATADLHVLFNTTEEHDSYAWGSMPRVPDTDGAFVYDADEWFSMGVRRREEMTAHTASNTSSVPSPLTFHEARPPSAEECSGFAGPAPNKSPTQWERIRRCTTAFLRTYGDGDGRRESSLASRRQPRIVVISSVTAFHLRPTLTEMTRLLGLLRPSPTLTVEIGRYYRLYATQLQWPANTDPKRSFLNVLQPFRYKSTIGVHVRRREFTCREEAEHPSATIIAMSEARYQFDGTGKNDSAAAGRPITTVARLASDCGWNSQSLLHIYDTYASWMRSRQAQGLRRSRCFAHVQTSNKQVLRSYVAFDEQVGPIGSQLQAALQQRYNPLKKKRAANGYPPIYAAFYDHRPRKDLFQTYQEIPARWEHSSADTQRADGEAVFDVAAVPRTTDSLVEMLYPIAEQEALALGIDFFVLGNTGVFRGNIISSVSINVCLRRLGRGLPCHGVLAGYYEMLYKGYM

Target ORF information:

RefSeq Version	XM_001468403.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 phosphoglycan beta 1,2 arabinosyltransferase,(SCA like) (SCAL), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001468403.1

ORF Insert Sequence:

ATGCAGGACA CTGCTTCACC CTTTCCCCAC CACCGTACGC CGGCGACGTA CCAGGCCGGC 
TTGCATTATC AGGCCAACGG ACGCGAAAGC GCGGCGCCGC TGCTTACCTC GTCGGCTGGA 
AATGCTGCCA ACGGTAAGCG GCTCAGTCAC TGGGGCCGCA ACGTTTTGCG TGGCTTTTAC 
CATGTCAAAT GGCATCAGCG CACGCAGTGT GCCGTTGTAG CGTGCTTGCT GTGGTTCTTC 
ACCCTTTTTG TGCTCCTGCA CACTTTTCTT CAGGTGTCGG GTCTGACGCA GTCGATTTAT 
GCGGTTTTCT CGAGGCCGAC TTCCGGGCTG CAAACACTCC TGGAGGACGA GCTCGTTATA 
CCTAGCCCTG TTGTGCCACC GAATGGAGCA TTTTGTGGTC TGTGTACAGA GGGCCTCGTT 
GTCTTCCGTC CAGCTAGTGC CGCCACATCC CTGGCTACGA CGCCTGCCCA GACCGAGATG 
GTAGTGTGCG TGGAAACGAT GGAGGAAGCC TGGTTGTCAG CGAGCGAGTC GGAGCCTCTA 
AGCACTGTAC GAGACTGTGT AGCAAGGCTC TATAACCTGG GTCTCCTGCA GCCTCCTCGT 
ACTACCATAA CCGCGGTGAA TGACACGTGT GCAGCAGTGC GCGTGACAGT GCAGGTGCTC 
TCAGGCGAGT CAGAAGAGGC AGATCGGAAC AAGTGCAGCA GCGGGTTCGT GGCGGAGCTG 
CAGATTTCAT CGACAGAACG GGAGAAGGTG GAGGTGCACA CTCAGCGGTT CCCGTCGTGG 
CCGCTCTGCC CTGTCGCCTC ACCGGAGGCT ATTGATGCTA AGGATGGACA CCGAGGTGGC 
AGTGACGGTA ATCATTACAT CGTGCCCGCG TACTTTGCGA CAGCAGCTGT TCGAGACACA 
GACGCAGACT GCGATGTCCC ACCGCCGTGG AGAATTGACA CTATCGAGGA CCTTGATGAG 
GTGGTACTGC GTTTCGCCGG GGACGCGGCT CAGACCACAG AGACATCGCC GCTGCTGGCG 
AGTGACCTGC GCTGCCCGAC CTACTTCCTC ACGGTACACC TTGGCCGCTT TGGCCGCCAT 
CACAATCAGC TGCAGGAGAT CTTGAACGGC ATCTCGCTGG CCAGGAGATC GAACCGCACG 
TTTATTTTGC CACCCTTTGT GCCGGCGCTG TACATGTCGT ACTTGAGGCT AAATCCAGAG 
CTTCTGTACG GATGGAATGC GCTACGCAGA AACGGCCACT ACTGTGTTCT GTCGTACGCC 
GAGGCGCGGC CAATACTGCG GCGTCTGCGT GAGCGCGATG GGGTAGTGAG TATGGAACGG 
GTCAGTTTTG CAGCCACTGC CGACCTGCAC GTGCTGTTCA ACACCACAGA AGAGCACGAC 
AGTTATGCTT GGGGATCCAT GCCTCGCGTG CCGGACACGG ATGGCGCGTT TGTGTACGAT 
GCAGATGAAT GGTTCTCGAT GGGGGTGCGG CGAAGGGAGG AGATGACAGC GCACACCGCA 
AGCAATACCT CATCAGTGCC ATCGCCGCTA ACGTTCCACG AGGCAAGGCC GCCTAGCGCG 
GAGGAGTGTA GCGGCTTCGC CGGCCCCGCT CCGAACAAGA GCCCAACGCA GTGGGAAAGG 
ATTCGCAGGT GCACCACTGC GTTTCTGCGC ACCTACGGCG ATGGTGACGG GAGACGCGAG 
TCGTCGTTAG CCTCACGGCG ACAGCCACGC ATTGTGGTGA TTTCGAGCGT CACAGCGTTT 
CATCTGCGGC CGACGCTGAC GGAAATGACC AGGCTGCTTG GCCTCCTGCG GCCGTCACCG 
ACACTCACGG TGGAGATTGG CCGGTACTAC CGACTCTATG CGACGCAGCT CCAGTGGCCA 
GCCAACACCG ATCCGAAGCG CTCTTTTTTA AACGTGCTGC AGCCATTTCG TTACAAGAGC 
ACCATTGGTG TGCACGTACG CCGTCGCGAG TTTACGTGTC GCGAGGAGGC CGAGCACCCC 
AGCGCCACCA TCATCGCTAT GTCGGAGGCG CGCTACCAGT TTGACGGCAC AGGTAAAAAC 
GATAGCGCCG CTGCTGGTCG CCCCATCACC ACCGTAGCGC GACTGGCGAG CGACTGCGGA 
TGGAATTCGC AGTCGCTACT GCACATCTAC GACACCTATG CGAGCTGGAT GCGATCGCGA 
CAGGCGCAGG GGCTGAGGCG GTCGCGTTGC TTCGCGCATG TGCAGACTTC AAACAAACAG 
GTGCTGCGGA GCTACGTCGC CTTTGACGAG CAAGTCGGCC CCATTGGCTC TCAGCTGCAA 
GCTGCACTGC AGCAGCGCTA CAACCCACTA AAGAAGAAGC GCGCCGCCAA TGGATATCCA 
CCCATCTATG CCGCATTCTA CGACCACCGG CCCCGCAAAG ACCTTTTCCA GACTTACCAA 
GAAATCCCGG CAAGATGGGA GCATTCATCC GCAGACACGC AACGCGCCGA CGGGGAAGCC 
GTCTTCGACG TCGCTGCTGT ACCGCGGACA ACGGACAGTC TTGTTGAGAT GTTGTACCCC 
ATCGCGGAGC AGGAGGCGCT GGCCCTGGGG ATCGACTTCT TTGTGCTCGG TAACACAGGC 
GTGTTCCGCG GCAATATTAT TTCGTCCGTG TCGATCAACG TGTGCTTGCG CCGCTTGGGC 
AGAGGGCTGC CGTGTCACGG CGTCCTCGCT GGGTACTACG AAATGCTGTA CAAGGGTTAC 
ATGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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SCAL cDNA ORF clone, Leishmania infantum JPCM5

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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