Gene Symbol | Ankrd39 |
Entrez Gene ID | 109346 |
Full Name | ankyrin repeat domain 39 |
Synonyms | 9130416N05Rik,C030004B10Rik |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Ankrd39 cDNA ORF clone
Gene Symbol | Ankrd39 |
Entrez Gene ID | 109346 |
Full Name | ankyrin repeat domain 39 |
Synonyms | 9130416N05Rik,C030004B10Rik |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001310533.1 | NP_001297462.1 | ankyrin repeat domain-containing protein 39 isoform 2 |
XM_006495624.1 | XP_006495687.1 | ankyrin repeat domain-containing protein 39 isoform X1 |
NM_026241.4 | NP_080517.1 | ankyrin repeat domain-containing protein 39 isoform 1 |
Canis lupus familiaris (dog) | ANKRD39 | XP_531796.1 |
Pan troglodytes (chimpanzee) | ANKRD39 | XP_515633.3 |
Rattus norvegicus (Norway rat) | Ankrd39 | NP_001128486.1 |
Danio rerio (zebrafish) | ankrd39 | NP_001107112.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP009205 | XP_319982.4 |
Homo sapiens (human) | ANKRD39 | NP_057550.3 |
Xenopus tropicalis (tropical clawed frog) | ankrd39 | XP_004912635.1 |
Bos taurus (cattle) | ANKRD39 | NP_001068939.1 |
Mus musculus (house mouse) | Ankrd39 | NP_080517.1 |
Drosophila melanogaster (fruit fly) | CG44001 | NP_723052.2 |
Viral Infection-Induced Differential Expression of LncRNAs Associated with Collagen in Mouse Placentas and Amniotic Sacs.
Pan J, Mor G, Ju W, Zhong J, Luo X, Aldo PB, Zhong M, Yu Y, Jenkins EC, Brown WT, Zhong N
American journal of reproductive immunology (New York, N.Y. : 1989)74(3)237-57(2015 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Ankrd39 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ankrd39 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu72283 | |
Clone ID Related Accession (Same CDS sequence) | NM_001310533.1 | |
Accession Version | NM_001310533.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 504bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-28 | |
Organism | Mus musculus(house mouse) | |
Product | ankyrin repeat domain-containing protein 39 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BB858219.1, BC144893.1, AK042896.1 and CD775078.1. On Jul 15, 2015 this sequence version replaced XM_006495623.2. Transcript Variant: This variant (2) uses an alternate splice junction in the 3' end of the coding sequence compared to variant 1, that causes a frameshift. The resulting isoform (2) has a shorter and distinct C-terminus compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: SRR1660817.116608.1, BC144893.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849381, SAMN01164141 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCGGCGC CGCACCTTTG CGCGGATGGC TCCTGCTGCT CTCACCCTAG TGCGGTGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001297462.1 |
CDS | 68..571 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001310533.1 |
1 | ATGGCGGCGC CGCACCTTTG CGCGGATGGC TCCTGCTGCT CTCACCCTAG TGCGGTGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu27210 | |
Clone ID Related Accession (Same CDS sequence) | XM_006495624.1 | |
Accession Version | XM_006495624.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 339bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | ankyrin repeat domain-containing protein 39 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000067.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGCGC CGCACCTTTG CGCGGATGGC TCCTGCTGCT CTCACCCTAG TGCGGTGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006495687.1 |
CDS | 256..594 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006495624.1 |
1 | ATGGCGGCGC CGCACCTTTG CGCGGATGGC TCCTGCTGCT CTCACCCTAG TGCGGTGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu01851 | |
Clone ID Related Accession (Same CDS sequence) | NM_026241.4 | |
Accession Version | NM_026241.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 552bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-29 | |
Organism | Mus musculus(house mouse) | |
Product | ankyrin repeat domain-containing protein 39 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BB858219.1, BC119100.1, AK042896.1 and CD775078.1. On Jul 15, 2015 this sequence version replaced NM_026241.3. Transcript Variant: This variant (1) encodes the longer isoform (1). ##Evidence-Data-START## Transcript exon combination :: AK018681.1, AK042896.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849381, SAMN01164141 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCGGCGC CGCACCTTTG CGCGGATGGC TCCTGCTGCT CTCACCCTAG TGCGGTGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_080517.1 |
CDS | 68..619 |
Translation |
Target ORF information:
Target ORF information:
|
NM_026241.4 |
1 | ATGGCGGCGC CGCACCTTTG CGCGGATGGC TCCTGCTGCT CTCACCCTAG TGCGGTGCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Viral Infection-Induced Differential Expression of LncRNAs Associated with Collagen in Mouse Placentas and Amniotic Sacs. |