Gene Symbol | Bnc1 |
Entrez Gene ID | 12173 |
Full Name | basonuclin 1 |
Synonyms | AI047752,AW546376,Bnc |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Bnc1 cDNA ORF clone
Gene Symbol | Bnc1 |
Entrez Gene ID | 12173 |
Full Name | basonuclin 1 |
Synonyms | AI047752,AW546376,Bnc |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_011250781.2 | XP_011249083.1 | zinc finger protein basonuclin-1 isoform X1 |
XM_011250781.3 | XP_011249083.1 | zinc finger protein basonuclin-1 isoform X1 |
XM_011250782.2 | XP_011249084.1 | zinc finger protein basonuclin-1 isoform X2 |
XM_011250782.1 | XP_011249084.1 | zinc finger protein basonuclin-1 isoform X2 |
NM_007562.2 | NP_031588.2 | zinc finger protein basonuclin-1 |
Homo sapiens (human) | BNC1 | NP_001708.3 |
Pan troglodytes (chimpanzee) | BNC1 | XP_523140.4 |
BNC1 | XP_001111612.2 | |
Mus musculus (house mouse) | Bnc1 | NP_031588.2 |
Danio rerio (zebrafish) | LOC568786 | XP_697231.3 |
Gallus gallus (chicken) | BNC1 | XP_004943880.1 |
Rattus norvegicus (Norway rat) | Bnc1 | NP_001102386.1 |
Canis lupus familiaris (dog) | BNC1 | XP_005618455.1 |
Bos taurus (cattle) | BNC1 | XP_002696643.1 |
Xenopus tropicalis (tropical clawed frog) | bnc1 | XP_004912674.1 |
The importance of basonuclin 2 in adult mice and its relation to basonuclin 1.
Vanhoutteghem A, Delhomme B, Herv? F, Nondier I, Petit JM, Araki M, Araki K, Djian P
Mechanisms of development14053-73(2016 05)
HSF2BP represses BNC1 transcriptional activity by sequestering BNC1 to the cytoplasm.
Wu Y, Liao S, Wang X, Wang S, Wang M, Han C
FEBS letters587(14)2099-104(2013 Jul)
BNC1 is required for maintaining mouse spermatogenesis.
Zhang X, Chou W, Haig-Ladewig L, Zeng W, Cao W, Gerton G, Dobrinski I, Tseng H
Genesis (New York, N.Y. : 2000)50(7)517-24(2012 Jul)
A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58.
Yokoyama S, Ito Y, Ueno-Kudoh H, Shimizu H, Uchibe K, Albini S, Mitsuoka K, Miyaki S, Kiso M, Nagai A, Hikata T, Osada T, Fukuda N, Yamashita S, Harada D, Mezzano V, Kasai M, Puri PL, Hayashizaki Y, Okado H, Hashimoto M, Asahara H
Developmental cell17(6)836-48(2009 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
BNC1 cannot substitute for BNC2.
Title: The importance of basonuclin 2 in adult mice and its relation to basonuclin 1.
HSF2BP may play a pivotal role in regulating BNC1 transcriptional activity and subcellular localization during spermatogenesis.
Title: HSF2BP represses BNC1 transcriptional activity by sequestering BNC1 to the cytoplasm.
BNC1 is required for the maintenance of spermatogenesis.
Title: BNC1 is required for maintaining mouse spermatogenesis.
Basonuclin likely coordinates functions of a subset of ribosomal RNA genes (rDNA) and a group of protein coding genes in cellular processes critical for the regulation of cell proliferation
Title: Basonuclin-null mutation impairs homeostasis and wound repair in mouse corneal epithelium.
The following Bnc1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Bnc1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu67213 | |
Clone ID Related Accession (Same CDS sequence) | XM_011250781.2 , XM_011250781.3 | |
Accession Version | XM_011250781.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2967bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein basonuclin-1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000073.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_011250781.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGATGG GGAAGCCAGA GGGCCAAGGT CCAGTCTCTT TGGAGATGGT TTACCTGAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011249083.1 |
CDS | 613..3579 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011250781.2 |
1 | ATGCTGATGG GGAAGCCAGA GGGCCAAGGT CCAGTCTCTT TGGAGATGGT TTACCTGAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu67214 | |
Clone ID Related Accession (Same CDS sequence) | XM_011250782.2 , XM_011250782.1 | |
Accession Version | XM_011250782.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2955bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein basonuclin-1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000073.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGGTGTA GAAACATGTT CTTCTCGTTT AAGGCATCTC TTTGTGGCTG TGGGGCTGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011249084.1 |
CDS | 243..3197 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011250782.1 |
1 | ATGCGGTGTA GAAACATGTT CTTCTCGTTT AAGGCATCTC TTTGTGGCTG TGGGGCTGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu67213 | |
Clone ID Related Accession (Same CDS sequence) | XM_011250781.2 , XM_011250781.3 | |
Accession Version | XM_011250781.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2967bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein basonuclin-1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000073.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_011250781.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGATGG GGAAGCCAGA GGGCCAAGGT CCAGTCTCTT TGGAGATGGT TTACCTGAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011249083.1 |
CDS | 611..3577 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011250781.3 |
1 | ATGCTGATGG GGAAGCCAGA GGGCCAAGGT CCAGTCTCTT TGGAGATGGT TTACCTGAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu67214 | |
Clone ID Related Accession (Same CDS sequence) | XM_011250782.2 , XM_011250782.1 | |
Accession Version | XM_011250782.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2955bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein basonuclin-1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000073.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_011250782.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGGTGTA GAAACATGTT CTTCTCGTTT AAGGCATCTC TTTGTGGCTG TGGGGCTGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011249084.1 |
CDS | 225..3179 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011250782.2 |
1 | ATGCGGTGTA GAAACATGTT CTTCTCGTTT AAGGCATCTC TTTGTGGCTG TGGGGCTGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu20977 | |
Clone ID Related Accession (Same CDS sequence) | NM_007562.2 | |
Accession Version | NM_007562.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2973bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-20 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein basonuclin-1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY146829.1, AK087567.1, AC161216.4 and AK051041.1. On Jun 12, 2007 this sequence version replaced NM_007562.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK087567.1, U88064.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849380 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCGGCGGT CGCCGAGCCG GGGCGGACGC GGAGCGGCCC GGGCAGGGGA CGCGCGCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_031588.2 |
CDS | 10..2982 |
Translation |
Target ORF information:
Target ORF information:
|
NM_007562.2 |
1 | ATGCGGCGGT CGCCGAGCCG GGGCGGACGC GGAGCGGCCC GGGCAGGGGA CGCGCGCCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The importance of basonuclin 2 in adult mice and its relation to basonuclin 1. |
HSF2BP represses BNC1 transcriptional activity by sequestering BNC1 to the cytoplasm. |
BNC1 is required for maintaining mouse spermatogenesis. |
A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58. |