Gene Symbol | 9930104L06Rik |
Entrez Gene ID | 194268 |
Full Name | RIKEN cDNA 9930104L06 gene |
Synonyms | C1orf109 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » 9930104L06Rik cDNA ORF clone
gRNAs
Gene Symbol | 9930104L06Rik |
Entrez Gene ID | 194268 |
Full Name | RIKEN cDNA 9930104L06 gene |
Synonyms | C1orf109 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006502884.4 | XP_006502947.1 | uncharacterized protein C1orf109 homolog isoform X1 |
XM_006502885.2 | XP_006502948.1 | uncharacterized protein C1orf109 homolog isoform X1 |
XM_006502886.3 | XP_006502949.1 | uncharacterized protein C1orf109 homolog isoform X2 |
NM_001355603.1 | NP_001342532.1 | uncharacterized protein C1orf109 homolog |
XM_006502884.3 | XP_006502947.1 | uncharacterized protein C1orf109 homolog isoform X1 |
NM_177573.3 | NP_808241.2 | uncharacterized protein C1orf109 homolog |
NM_001355605.1 | NP_001342534.1 | uncharacterized protein C1orf109 homolog |
Canis lupus familiaris (dog) | C15H1orf109 | XP_850202.1 |
Rattus norvegicus (Norway rat) | RGD1560436 | NP_001102734.1 |
Homo sapiens (human) | C1orf109 | NP_060320.1 |
C19H1orf109 | XP_001115289.1 | |
Pan troglodytes (chimpanzee) | C1H1orf109 | XP_001169809.1 |
Bos taurus (cattle) | C3H1orf109 | NP_001095362.1 |
Mus musculus (house mouse) | 9930104L06Rik | NP_808241.2 |
Xenopus tropicalis (tropical clawed frog) | c1orf109 | NP_001037904.1 |
Gallus gallus (chicken) | C1ORF109 | XP_417759.3 |
Danio rerio (zebrafish) | c1orf109 | NP_775376.1 |
Targeting a complex transcriptome: the construction of the mouse full-length cDNA encyclopedia.
Carninci P, Waki K, Shiraki T, Konno H, Shibata K, Itoh M, Aizawa K, Arakawa T, Ishii Y, Sasaki D, Bono H, Kondo S, Sugahara Y, Saito R, Osato N, Fukuda S, Sato K, Watahiki A, Hirozane-Kishikawa T, Nakamura M, Shibata Y, Yasunishi A, Kikuchi N, Yoshiki A, Kusakabe M, Gustincich S, Beisel K, Pavan W, Aidinis V, Nakagawara A, Held WA, Iwata H, Kono T, Nakauchi H, Lyons P, Wells C, Hume DA, Fagiolini M, Hensch TK, Brinkmeier M, Camper S, Hirota J, Mombaerts P, Muramatsu M, Okazaki Y, Kawai J, Hayashizaki Y
Genome research13(6B)1273-89(2003 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following 9930104L06Rik gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the 9930104L06Rik cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu06453 | |
Clone ID Related Accession (Same CDS sequence) | XM_006502886.3 , NM_001355603.1 , NM_177573.3 , NM_001355605.1 | |
Accession Version | NM_001355603.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 654bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-24 | |
Organism | Mus musculus(house mouse) | |
Product | uncharacterized protein C1orf109 homolog | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY781867.1, AK037053.1, AK158126.1 and AL606933.4. Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1-3 encode the same protein. ##Evidence-Data-START## Transcript exon combination :: SRR1660815.206125.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849377 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTCATG ACCAGCCTCT GCTGGTTGTG CAGGAGGCCC TGAGGAAGTG CTTCCCTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001342532.1 |
CDS | 202..855 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCTCATG ACCAGCCTCT GCTGGTTGTG CAGGAGGCCC TGAGGAAGTG CTTCCCTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu06453 | |
Clone ID Related Accession (Same CDS sequence) | XM_006502886.3 , NM_001355603.1 , NM_177573.3 , NM_001355605.1 | |
Accession Version | NM_177573.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 654bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-24 | |
Organism | Mus musculus(house mouse) | |
Product | uncharacterized protein C1orf109 homolog | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL606933.4 and AK158126.1. On Sep 7, 2006 this sequence version replaced NM_177573.2. Transcript Variant: This variant (1) represents the longest transcript. Variants 1-3 encode the same protein. ##Evidence-Data-START## Transcript exon combination :: AK158126.1, SRR1660817.300999.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTCATG ACCAGCCTCT GCTGGTTGTG CAGGAGGCCC TGAGGAAGTG CTTCCCTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_808241.2 |
CDS | 290..943 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCATG ACCAGCCTCT GCTGGTTGTG CAGGAGGCCC TGAGGAAGTG CTTCCCTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu06453 | |
Clone ID Related Accession (Same CDS sequence) | XM_006502886.3 , NM_001355603.1 , NM_177573.3 , NM_001355605.1 | |
Accession Version | NM_001355605.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 654bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-24 | |
Organism | Mus musculus(house mouse) | |
Product | uncharacterized protein C1orf109 homolog | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY781867.1, AK037053.1, AK158126.1 and AL606933.4. On Sep 21, 2017 this sequence version replaced XM_006502886.3. Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1-3 encode the same protein. ##Evidence-Data-START## Transcript exon combination :: BC099946.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCTCATG ACCAGCCTCT GCTGGTTGTG CAGGAGGCCC TGAGGAAGTG CTTCCCTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001342534.1 |
CDS | 199..852 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCATG ACCAGCCTCT GCTGGTTGTG CAGGAGGCCC TGAGGAAGTG CTTCCCTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu06453 | |
Clone ID Related Accession (Same CDS sequence) | XM_006502886.3 , NM_001355603.1 , NM_177573.3 , NM_001355605.1 | |
Accession Version | XM_006502886.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 654bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(House mouse) | |
Product | uncharacterized protein C1orf109 homolog isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000070.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006502886.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCATG ACCAGCCTCT GCTGGTTGTG CAGGAGGCCC TGAGGAAGTG CTTCCCTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006502949.1 |
CDS | 204..857 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCATG ACCAGCCTCT GCTGGTTGTG CAGGAGGCCC TGAGGAAGTG CTTCCCTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu33442 | |
Clone ID Related Accession (Same CDS sequence) | XM_006502884.4 , XM_006502885.2 , XM_006502884.3 | |
Accession Version | XM_006502885.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 765bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | uncharacterized protein C1orf109 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000070.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced XM_006502885.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCATG ACCAGCCTCT GCTGGTTGTG CAGGAGGCCC TGAGGAAGTG CTTCCCTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006502948.1 |
CDS | 205..969 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCATG ACCAGCCTCT GCTGGTTGTG CAGGAGGCCC TGAGGAAGTG CTTCCCTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu33442 | |
Clone ID Related Accession (Same CDS sequence) | XM_006502884.4 , XM_006502885.2 , XM_006502884.3 | |
Accession Version | XM_006502884.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 765bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | uncharacterized protein C1orf109 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000070.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006502884.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCATG ACCAGCCTCT GCTGGTTGTG CAGGAGGCCC TGAGGAAGTG CTTCCCTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006502947.1 |
CDS | 263..1027 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCATG ACCAGCCTCT GCTGGTTGTG CAGGAGGCCC TGAGGAAGTG CTTCCCTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu33442 | |
Clone ID Related Accession (Same CDS sequence) | XM_006502884.4 , XM_006502885.2 , XM_006502884.3 | |
Accession Version | XM_006502884.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 765bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | uncharacterized protein C1orf109 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000070.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006502884.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCATG ACCAGCCTCT GCTGGTTGTG CAGGAGGCCC TGAGGAAGTG CTTCCCTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006502947.1 |
CDS | 266..1030 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTCATG ACCAGCCTCT GCTGGTTGTG CAGGAGGCCC TGAGGAAGTG CTTCCCTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Targeting a complex transcriptome: the construction of the mouse full-length cDNA encyclopedia. |