Gene Symbol | Jmjd4 |
Entrez Gene ID | 194952 |
Full Name | jumonji domain containing 4 |
Synonyms | 6430559I23 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Jmjd4 cDNA ORF clone
gRNAs
Gene Symbol | Jmjd4 |
Entrez Gene ID | 194952 |
Full Name | jumonji domain containing 4 |
Synonyms | 6430559I23 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006532600.2 | XP_006532663.1 | jmjC domain-containing protein 4 isoform X1 |
NM_178659.6 | NP_848774.1 | 2-oxoglutarate and iron-dependent oxygenase JMJD4 isoform 1 |
XM_006532600.3 | XP_006532663.1 | 2-oxoglutarate and iron-dependent oxygenase JMJD4 isoform X1 |
NM_001205068.1 | NP_001191997.1 | 2-oxoglutarate and iron-dependent oxygenase JMJD4 isoform 2 |
Pan troglodytes (chimpanzee) | JMJD4 | XP_001143331.1 |
Danio rerio (zebrafish) | jmjd4 | NP_001070096.1 |
Canis lupus familiaris (dog) | JMJD4 | XP_005628838.1 |
Homo sapiens (human) | JMJD4 | NP_075383.2 |
Gallus gallus (chicken) | JMJD4 | NP_001026130.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP008415 | XP_001237878.2 |
Arabidopsis thaliana (thale cress) | AT5G63080 | NP_201113.2 |
Xenopus tropicalis (tropical clawed frog) | jmjd4 | XP_002939408.1 |
JMJD4 | XP_001086580.1 | |
Bos taurus (cattle) | JMJD4 | XP_002688559.3 |
Rattus norvegicus (Norway rat) | Jmjd4 | NP_001099254.1 |
Drosophila melanogaster (fruit fly) | CG7200 | NP_609870.1 |
Mus musculus (house mouse) | Jmjd4 | NP_848774.1 |
Oryza sativa (rice) | Os01g0546900 | NP_001043285.2 |
Mouse JMJD4 is dispensable for embryogenesis.
Yoo H, Son D, Lee YJ, Hong K
Molecular reproduction and development83(7)588-93(2016 Jul)
Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst.
Guo G, Huss M, Tong GQ, Wang C, Li Sun L, Clarke ND, Robson P
Developmental cell18(4)675-85(2010 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Jmjd4 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Jmjd4 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu02742 | |
Clone ID Related Accession (Same CDS sequence) | NM_001205068.1 | |
Accession Version | NM_001205068.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1248bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-01-19 | |
Organism | Mus musculus(house mouse) | |
Product | 2-oxoglutarate and iron-dependent oxygenase JMJD4 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK047586.1, AK052144.1 and AL592522.12. Transcript Variant: This variant (2) uses an alternate in-frame splice site in the coding region, compared to variant 1. The encoded isoform (2) is shorter than isoform 1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AK052144.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGATCGGG AGACACGCAC CTTTGCCGAG CGGTACTACC GGGACCTCCG AGACCCAGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001191997.1 |
CDS | 201..1448 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGATCGGG AGACACGCAC CTTTGCCGAG CGGTACTACC GGGACCTCCG AGACCCAGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu45822 | |
Clone ID Related Accession (Same CDS sequence) | XM_006532600.2 , XM_006532600.3 | |
Accession Version | XM_006532600.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 765bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | jmjC domain-containing protein 4 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000077.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced XM_006532600.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGTTCTG GGACGTCCTC AATGTGGATG ACTATCGTTT TGTCTATGCA GGCCCCAGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006532663.1 |
CDS | 521..1285 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGTTCTG GGACGTCCTC AATGTGGATG ACTATCGTTT TGTCTATGCA GGCCCCAGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu07504 | |
Clone ID Related Accession (Same CDS sequence) | NM_178659.6 | |
Accession Version | NM_178659.6 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1284bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-01-19 | |
Organism | Mus musculus(house mouse) | |
Product | 2-oxoglutarate and iron-dependent oxygenase JMJD4 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK047586.1, BC116707.1 and AL592522.12. On Mar 23, 2011 this sequence version replaced NM_178659.5. Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (1). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AK145394.1, AK079104.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGATCGGG AGACACGCAC CTTTGCCGAG CGGTACTACC GGGACCTCCG AGACCCAGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_848774.1 |
CDS | 201..1484 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGATCGGG AGACACGCAC CTTTGCCGAG CGGTACTACC GGGACCTCCG AGACCCAGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu45822 | |
Clone ID Related Accession (Same CDS sequence) | XM_006532600.2 , XM_006532600.3 | |
Accession Version | XM_006532600.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 765bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | 2-oxoglutarate and iron-dependent oxygenase JMJD4 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000077.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006532600.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGTTCTG GGACGTCCTC AATGTGGATG ACTATCGTTT TGTCTATGCA GGCCCCAGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006532663.1 |
CDS | 716..1480 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGTTCTG GGACGTCCTC AATGTGGATG ACTATCGTTT TGTCTATGCA GGCCCCAGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Mouse JMJD4 is dispensable for embryogenesis. |
Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst. |