Gene Symbol | Slc12a4 |
Entrez Gene ID | 20498 |
Full Name | solute carrier family 12, member 4 |
Synonyms | AW546649,KCC1,RBCKCC1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Slc12a4 cDNA ORF clone
Gene Symbol | Slc12a4 |
Entrez Gene ID | 20498 |
Full Name | solute carrier family 12, member 4 |
Synonyms | AW546649,KCC1,RBCKCC1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006530792.2 | XP_006530855.1 | solute carrier family 12 member 4 isoform X1 |
NM_001253804.1 | NP_001240733.1 | solute carrier family 12 member 4 isoform 1 |
NM_009195.3 | NP_033221.1 | solute carrier family 12 member 4 isoform 2 |
Homo sapiens (human) | SLC12A4 | NP_005063.1 |
Gallus gallus (chicken) | SLC12A4 | XP_003641964.1 |
Danio rerio (zebrafish) | slc12a4 | XP_691291.2 |
Drosophila melanogaster (fruit fly) | kcc | NP_726377.1 |
Canis lupus familiaris (dog) | SLC12A4 | NP_001010952.1 |
Rattus norvegicus (Norway rat) | Slc12a4 | NP_062102.1 |
Caenorhabditis elegans (roundworm) | kcc-2 | NP_001255280.1 |
Pan troglodytes (chimpanzee) | SLC12A4 | XP_003315222.2 |
SLC12A4 | XP_001096326.2 | |
Bos taurus (cattle) | SLC12A4 | NP_001167562.1 |
Mus musculus (house mouse) | Slc12a4 | NP_001240733.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP011498 | XP_317803.3 |
Xenopus tropicalis (tropical clawed frog) | LOC100493471 | XP_002942716.1 |
The Zn
Sunuwar L, Asraf H, Donowitz M, Sekler I, Hershfinkel M
Biochimica et biophysica acta1863(4)947-960(2017 Apr)
Functional kinomics establishes a critical node of volume-sensitive cation-Cl
Zhang J, Gao G, Begum G, Wang J, Khanna AR, Shmukler BE, Daubner GM, de Los Heros P, Davies P, Varghese J, Bhuiyan MI, Duan J, Zhang J, Duran D, Alper SL, Sun D, Elledge SJ, Alessi DR, Kahle KT
Scientific reports635986(2016 Oct)
Activation of the erythroid K-Cl cotransporter Kcc1 enhances sickle cell disease pathology in a humanized mouse model.
Brown FC, Conway AJ, Cerruti L, Collinge JE, McLean C, Wiley JS, Kile BT, Jane SM, Curtis DJ
Blood126(26)2863-70(2015 Dec)
Inactivation of the microRNA-183/96/182 cluster results in syndromic retinal degeneration.
Lumayag S, Haldin CE, Corbett NJ, Wahlin KJ, Cowan C, Turturro S, Larsen PE, Kovacs B, Witmer PD, Valle D, Zack DJ, Nicholson DA, Xu S
Proceedings of the National Academy of Sciences of the United States of America110(6)E507-16(2013 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
We show that a single mutant allele of Kcc1 induces widespread sickling and tissue damage, leading to premature death in a humanized mouse model of sickle cell disease
Title: Activation of the erythroid K-Cl cotransporter Kcc1 enhances sickle cell disease pathology in a humanized mouse model.
KCC3 is the dominant isoform in erythrocytes, with variable expression of KCC1 and KCC4 that could result in modulation of KCC activity
Title: K-Cl cotransporter gene expression during human and murine erythroid differentiation.
Treatment of cells expressing mouse K-Cl cotransporter Kcc1 with several chemical cross-linkers shifted Kcc1 polypeptide to higher MW forms. The N-terminal & C-terminal cytoplasmic tails of Kcc1 were not essential for Kcc1 crosslinking.
Title: Chemical crosslinking studies with the mouse Kcc1 K-Cl cotransporter.
Ste20-related proline-alanine-rich kinase (SPAK) and oxidative stress response 1 (OSR1) with the cotransporters KCC3, NKCC1, and NKCC2 but not KCC1 and KCC4
Title: Cation chloride cotransporters interact with the stress-related kinases Ste20-related proline-alanine-rich kinase (SPAK) and oxidative stress response 1 (OSR1).
The following Slc12a4 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Slc12a4 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu03701 | |
Clone ID Related Accession (Same CDS sequence) | NM_009195.3 | |
Accession Version | NM_009195.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3258bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-09 | |
Organism | Mus musculus(house mouse) | |
Product | solute carrier family 12 member 4 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY740705.1 and AK159274.1. On Dec 6, 2011 this sequence version replaced NM_009195.2. Transcript Variant: This variant (2) uses a different splice site in the 5' coding region, compared to variant 1. The resulting protein (isoform 2) is shorter than isoform 1 by two amino acids. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK159274.1, AK167371.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849375 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGCCTCACT TCACCGTGGT GCCGGTGGAC GGGCCGCGAC GCGGCGACTA TGACAACCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_033221.1 |
CDS | 77..3334 |
Translation |
Target ORF information:
Target ORF information:
|
NM_009195.3 |
1 | ATGCCTCACT TCACCGTGGT GCCGGTGGAC GGGCCGCGAC GCGGCGACTA TGACAACCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu05628 | |
Clone ID Related Accession (Same CDS sequence) | NM_001253804.1 | |
Accession Version | NM_001253804.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3264bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-09 | |
Organism | Mus musculus(house mouse) | |
Product | solute carrier family 12 member 4 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY740705.1, AK149969.1, AK164479.1 and AK159274.1. Transcript Variant: This variant (1) represents the longest transcript and it encodes the longest protein (isoform 1). Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK149969.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849375 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGCCTCACT TCACCGTGGT GCCGGTGGAC GGGCCGCGAC GCGGCGACTA TGACAACCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001240733.1 |
CDS | 77..3340 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001253804.1 |
1 | ATGCCTCACT TCACCGTGGT GCCGGTGGAC GGGCCGCGAC GCGGCGACTA TGACAACCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu41304 | |
Clone ID Related Accession (Same CDS sequence) | XM_006530792.2 | |
Accession Version | XM_006530792.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3243bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | solute carrier family 12 member 4 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000074.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced XM_006530792.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGAGCGG GCGGGGCGGG CCAGCCTGGG GCGGCGGGGA CTGCCGGCTG GAGGCCGGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006530855.1 |
CDS | 31..3273 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006530792.2 |
1 | ATGCGAGCGG GCGGGGCGGG CCAGCCTGGG GCGGCGGGGA CTGCCGGCTG GAGGCCGGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The Zn |
Functional kinomics establishes a critical node of volume-sensitive cation-Cl |
Activation of the erythroid K-Cl cotransporter Kcc1 enhances sickle cell disease pathology in a humanized mouse model. |
Inactivation of the microRNA-183/96/182 cluster results in syndromic retinal degeneration. |