Gene Symbol | Zkscan5 |
Entrez Gene ID | 22757 |
Full Name | zinc finger with KRAB and SCAN domains 5 |
Synonyms | AI132486,AI326970,Zfp95,hKraba1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Zkscan5 cDNA ORF clone
Gene Symbol | Zkscan5 |
Entrez Gene ID | 22757 |
Full Name | zinc finger with KRAB and SCAN domains 5 |
Synonyms | AI132486,AI326970,Zfp95,hKraba1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_017320817.1 | XP_017176306.1 | zinc finger protein with KRAB and SCAN domains 5 isoform X3 |
XM_011241010.1 | XP_011239312.1 | zinc finger protein with KRAB and SCAN domains 5 isoform X1 |
NM_001359190.1 | NP_001346119.1 | zinc finger protein with KRAB and SCAN domains 5 isoform 6 |
NM_001359187.1 | NP_001346116.1 | zinc finger protein with KRAB and SCAN domains 5 isoform 3 |
NM_001359191.1 | NP_001346120.1 | zinc finger protein with KRAB and SCAN domains 5 isoform 7 |
XM_017320816.1 | XP_017176305.1 | zinc finger protein with KRAB and SCAN domains 5 isoform X2 |
XM_006504823.3 | XP_006504886.1 | zinc finger protein with KRAB and SCAN domains 5 isoform X5 |
NM_001359192.1 | NP_001346121.1 | zinc finger protein with KRAB and SCAN domains 5 isoform 8 |
NM_016683.2 | NP_057892.2 | zinc finger protein with KRAB and SCAN domains 5 isoform 1 |
NM_001167944.1 | NP_001161416.1 | zinc finger protein with KRAB and SCAN domains 5 isoform 2 |
NM_001359189.1 | NP_001346118.1 | zinc finger protein with KRAB and SCAN domains 5 isoform 5 |
NM_001359188.1 | NP_001346117.1 | zinc finger protein with KRAB and SCAN domains 5 isoform 4 |
XM_006504820.3 | XP_006504883.1 | zinc finger protein with KRAB and SCAN domains 5 isoform X1 |
XM_006504822.2 | XP_006504885.1 | zinc finger protein with KRAB and SCAN domains 5 isoform X1 |
Homo sapiens (human) | ZKSCAN5 | NP_055384.1 |
ZKSCAN5 | XP_001111912.2 | |
Bos taurus (cattle) | ZKSCAN5 | NP_001180102.1 |
Mus musculus (house mouse) | Zkscan5 | NP_057892.2 |
Rattus norvegicus (Norway rat) | Zkscan5 | NP_001100589.1 |
Pan troglodytes (chimpanzee) | ZKSCAN5 | NP_001138504.1 |
Canis lupus familiaris (dog) | ZKSCAN5 | XP_546974.3 |
Constraint and divergence of global gene expression in the mammalian embryo.
Spies N, Smith CL, Rodriguez JM, Baker JC, Batzoglou S, Sidow A
eLife4e05538(2015 Apr)
Deterministic and stochastic allele specific gene expression in single mouse blastomeres.
Tang F, Barbacioru C, Nordman E, Bao S, Lee C, Wang X, Tuch BB, Heard E, Lao K, Surani MA
PloS one6(6)e21208(2011)
A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58.
Yokoyama S, Ito Y, Ueno-Kudoh H, Shimizu H, Uchibe K, Albini S, Mitsuoka K, Miyaki S, Kiso M, Nagai A, Hikata T, Osada T, Fukuda N, Yamashita S, Harada D, Mezzano V, Kasai M, Puri PL, Hayashizaki Y, Okado H, Hashimoto M, Asahara H
Developmental cell17(6)836-48(2009 Dec)
Prediction of the coding sequences of mouse homologues of KIAA gene: IV. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.
Okazaki N, F-Kikuno R, Ohara R, Inamoto S, Koseki H, Hiraoka S, Saga Y, Seino S, Nishimura M, Kaisho T, Hoshino K, Kitamura H, Nagase T, Ohara O, Koga H
DNA research : an international journal for rapid publication of reports on genes and genomes11(3)205-18(2004 Jun)
Three novel spermatogenesis-specific zinc finger genes.
Weissig H, Narisawa S, Sikstr?m C, Olsson PG, McCarrey JR, Tsonis PA, Del Rio-Tsonis K, Mill?n JL
FEBS letters547(1-3)61-8(2003 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
cloning and characterization of its expression during spermatogenesis
Title: Three novel spermatogenesis-specific zinc finger genes.
The following Zkscan5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Zkscan5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu11233 | |
Clone ID Related Accession (Same CDS sequence) | NM_001167944.1 | |
Accession Version | NM_001167944.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2241bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-22 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein with KRAB and SCAN domains 5 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BQ769351.1 and BC060248.1. Transcript Variant: This variant (2) lacks two coding exons compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: BC060248.1, SRR1660815.229760.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849375, SAMN00849380 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGATAATGA CAGAATCCAG GGCAGTTATA CACTTAGAGC CTCCCGCTGA GACTTCGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001161416.1 |
CDS | 737..2977 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001167944.1 |
1 | ATGATAATGA CAGAATCCAG GGCAGTTATA CACTTAGAGC CTCCCGCTGA GACTTCGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu36394 | |
Clone ID Related Accession (Same CDS sequence) | XM_011241010.1 , XM_006504822.2 | |
Accession Version | XM_011241010.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1551bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein with KRAB and SCAN domains 5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGCCGA GGTGGCAGGT GAATCCCACT TCGGGGAATC CAAGGCAGAA AAGACCTCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011239312.1 |
CDS | 310..1860 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011241010.1 |
1 | ATGGTGCCGA GGTGGCAGGT GAATCCCACT TCGGGGAATC CAAGGCAGAA AAGACCTCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu36394 | |
Clone ID Related Accession (Same CDS sequence) | XM_011241010.1 , XM_006504822.2 | |
Accession Version | XM_006504822.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1551bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein with KRAB and SCAN domains 5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced XM_006504822.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGCCGA GGTGGCAGGT GAATCCCACT TCGGGGAATC CAAGGCAGAA AAGACCTCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006504885.1 |
CDS | 348..1898 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006504822.2 |
1 | ATGGTGCCGA GGTGGCAGGT GAATCCCACT TCGGGGAATC CAAGGCAGAA AAGACCTCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu36395 | |
Clone ID Related Accession (Same CDS sequence) | NM_001359191.1 , XM_006504823.3 | |
Accession Version | NM_001359191.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1233bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-25 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein with KRAB and SCAN domains 5 isoform 7 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC127411.3. On Dec 28, 2017 this sequence version replaced XM_006504823.3. Transcript Variant: This variant (7) uses an alternate splice junction in the 3' end compared to variant 1, that causes a frameshift. The resulting isoform (7) has a shorter and distinct C-terminus compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660821.85496.1, SRR1660811.55152.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849375, SAMN00849384 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGATAATGA CAGAATCCAG GGCAGTTATA CACTTAGAGC CTCCCGCTGA GACTTCGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001346120.1 |
CDS | 737..1969 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001359191.1 |
1 | ATGATAATGA CAGAATCCAG GGCAGTTATA CACTTAGAGC CTCCCGCTGA GACTTCGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu36395 | |
Clone ID Related Accession (Same CDS sequence) | NM_001359191.1 , XM_006504823.3 | |
Accession Version | XM_006504823.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1233bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(House mouse) | |
Product | zinc finger protein with KRAB and SCAN domains 5 isoform X5 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006504823.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATAATGA CAGAATCCAG GGCAGTTATA CACTTAGAGC CTCCCGCTGA GACTTCGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006504886.1 |
CDS | 839..2071 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006504823.3 |
1 | ATGATAATGA CAGAATCCAG GGCAGTTATA CACTTAGAGC CTCCCGCTGA GACTTCGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu83647 | |
Clone ID Related Accession (Same CDS sequence) | NM_001359192.1 | |
Accession Version | NM_001359192.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1014bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-25 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein with KRAB and SCAN domains 5 isoform 8 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC127411.3. Transcript Variant: This variant (8) lacks two coding exons and uses an alternate splice junction in the 3' end compared to variant 1, that causes a frameshift. The resulting isoform (8) has a shorter and distinct C-terminus and lacks an alternate internal segment compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660819.142292.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849375, SAMN01164131 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGATAATGA CAGAATCCAG GGCAGTTATA CACTTAGAGC CTCCCGCTGA GACTTCGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001346121.1 |
CDS | 737..1750 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001359192.1 |
1 | ATGATAATGA CAGAATCCAG GGCAGTTATA CACTTAGAGC CTCCCGCTGA GACTTCGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu81333 | |
Clone ID Related Accession (Same CDS sequence) | XM_017320817.1 , NM_001359190.1 | |
Accession Version | NM_001359190.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1794bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-25 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein with KRAB and SCAN domains 5 isoform 6 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC127411.3. On Dec 23, 2017 this sequence version replaced XM_017320817.1. Transcript Variant: This variant (6) contains an alternate splice junction in the 5' end and lacks two coding exons compared to variant 1. The resulting isoform (6) is shorter at the N-terminus and lacks an alternate internal segment compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660817.45379.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849375, SAMN00849381 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGTACCAC CCGGAGCCAC GCAGGAGTCC TTCAGTCACC AGTGTCTACC TGTGGAGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001346119.1 |
CDS | 1197..2990 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001359190.1 |
1 | ATGGTACCAC CCGGAGCCAC GCAGGAGTCC TTCAGTCACC AGTGTCTACC TGTGGAGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu81333 | |
Clone ID Related Accession (Same CDS sequence) | XM_017320817.1 , NM_001359190.1 | |
Accession Version | XM_017320817.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1794bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(House mouse) | |
Product | zinc finger protein with KRAB and SCAN domains 5 isoform X3 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTACCAC CCGGAGCCAC GCAGGAGTCC TTCAGTCACC AGTGTCTACC TGTGGAGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017176306.1 |
CDS | 1268..3061 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017320817.1 |
1 | ATGGTACCAC CCGGAGCCAC GCAGGAGTCC TTCAGTCACC AGTGTCTACC TGTGGAGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu10433 | |
Clone ID Related Accession (Same CDS sequence) | NM_016683.2 | |
Accession Version | NM_016683.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2460bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-23 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein with KRAB and SCAN domains 5 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BQ769351.1, AK173086.1, AB221634.1 and BC060248.1. On Nov 20, 2009 this sequence version replaced NM_016683.1. Transcript Variant: This variant (1) encodes the longest isoform (1). ##Evidence-Data-START## Transcript exon combination :: AK173086.1, SRR1660817.277942.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGATAATGA CAGAATCCAG GGCAGTTATA CACTTAGAGC CTCCCGCTGA GACTTCGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_057892.2 |
CDS | 737..3196 |
Translation |
Target ORF information:
Target ORF information:
|
NM_016683.2 |
1 | ATGATAATGA CAGAATCCAG GGCAGTTATA CACTTAGAGC CTCCCGCTGA GACTTCGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu36393 | |
Clone ID Related Accession (Same CDS sequence) | NM_001359188.1 , XM_006504820.3 | |
Accession Version | NM_001359188.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2013bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-25 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein with KRAB and SCAN domains 5 isoform 4 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC127411.3. On Dec 23, 2017 this sequence version replaced XM_006504820.3. Transcript Variant: This variant (4) contains an alternate splice junction in the 5' end compared to variant 1. The resulting isoform (4) is shorter at the N-terminus compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660819.51824.1, SRR1660817.203246.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGTACCAC CCGGAGCCAC GCAGGAGTCC TTCAGTCACC AGTGTCTACC TGTGGAGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001346117.1 |
CDS | 1197..3209 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001359188.1 |
1 | ATGGTACCAC CCGGAGCCAC GCAGGAGTCC TTCAGTCACC AGTGTCTACC TGTGGAGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu36393 | |
Clone ID Related Accession (Same CDS sequence) | NM_001359188.1 , XM_006504820.3 | |
Accession Version | XM_006504820.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2013bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(House mouse) | |
Product | zinc finger protein with KRAB and SCAN domains 5 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006504820.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTACCAC CCGGAGCCAC GCAGGAGTCC TTCAGTCACC AGTGTCTACC TGTGGAGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006504883.1 |
CDS | 1269..3281 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006504820.3 |
1 | ATGGTACCAC CCGGAGCCAC GCAGGAGTCC TTCAGTCACC AGTGTCTACC TGTGGAGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu81332 | |
Clone ID Related Accession (Same CDS sequence) | XM_017320816.1 , NM_001359189.1 | |
Accession Version | NM_001359189.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1899bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-25 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein with KRAB and SCAN domains 5 isoform 5 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC127411.3. On Dec 23, 2017 this sequence version replaced XM_017320816.1. Transcript Variant: This variant (5) contains two alternate splice junctions compared to variant 1. The resulting isoform (5) has a shorter and distinct N-terminus compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660821.155496.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849388, SAMN00849390 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGTTTCTT CCGTTCCCCT GAAGGACAGC CAGGAGCTGA CAGATTCACT CCTCTCAGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001346118.1 |
CDS | 1294..3192 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001359189.1 |
1 | ATGGTTTCTT CCGTTCCCCT GAAGGACAGC CAGGAGCTGA CAGATTCACT CCTCTCAGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu83650 | |
Clone ID Related Accession (Same CDS sequence) | NM_001359187.1 | |
Accession Version | NM_001359187.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2415bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-25 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein with KRAB and SCAN domains 5 isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC127411.3. Transcript Variant: This variant (3) uses an alternate in-frame splice junction compared to variant 1. The resulting isoform (3) has the same N- and C-termini but is shorter compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660825.94846.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849375, SAMN00849380 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGATAATGA CAGAATCCAG GGCAGTTATA CACTTAGAGC CTCCCGCTGA GACTTCGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001346116.1 |
CDS | 737..3151 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001359187.1 |
1 | ATGATAATGA CAGAATCCAG GGCAGTTATA CACTTAGAGC CTCCCGCTGA GACTTCGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu81332 | |
Clone ID Related Accession (Same CDS sequence) | XM_017320816.1 , NM_001359189.1 | |
Accession Version | XM_017320816.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1899bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(House mouse) | |
Product | zinc finger protein with KRAB and SCAN domains 5 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTTTCTT CCGTTCCCCT GAAGGACAGC CAGGAGCTGA CAGATTCACT CCTCTCAGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017176305.1 |
CDS | 1365..3263 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017320816.1 |
1 | ATGGTTTCTT CCGTTCCCCT GAAGGACAGC CAGGAGCTGA CAGATTCACT CCTCTCAGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Constraint and divergence of global gene expression in the mammalian embryo. |
Deterministic and stochastic allele specific gene expression in single mouse blastomeres. |
A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58. |
Prediction of the coding sequences of mouse homologues of KIAA gene: IV. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. |
Three novel spermatogenesis-specific zinc finger genes. |