Gene Symbol | Asphd1 |
Entrez Gene ID | 233879 |
Full Name | aspartate beta-hydroxylase domain containing 1 |
Synonyms | A830007L07Rik,Gm168 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Asphd1 cDNA ORF clone
Gene Symbol | Asphd1 |
Entrez Gene ID | 233879 |
Full Name | aspartate beta-hydroxylase domain containing 1 |
Synonyms | A830007L07Rik,Gm168 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001039645.1 | NP_001034734.1 | aspartate beta-hydroxylase domain-containing protein 1 isoform 2 |
NM_001347657.2 | NP_001334586.1 | aspartate beta-hydroxylase domain-containing protein 1 isoform 1 |
NM_001347657.1 | NP_001334586.1 | aspartate beta-hydroxylase domain-containing protein 1 isoform 1 |
NM_001039645.2 | NP_001034734.1 | aspartate beta-hydroxylase domain-containing protein 1 isoform 2 |
NM_001361488.1 | NP_001348417.1 | aspartate beta-hydroxylase domain-containing protein 1 isoform 2 |
Embryonic forebrain transcriptome of mice with polyalanine expansion mutations in the ARX homeobox gene.
Mattiske T, Lee K, Gecz J, Friocourt G, Shoubridge C
Human molecular genetics25(24)5433-5443(2016 12)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Asphd1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Asphd1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu39570 | |
Clone ID Related Accession (Same CDS sequence) | NM_001347657.2 , NM_001347657.1 | |
Accession Version | NM_001347657.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1083bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-07-27 | |
Organism | Mus musculus(house mouse) | |
Product | aspartate beta-hydroxylase domain-containing protein 1 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC122863.4. On Mar 28, 2018 this sequence version replaced NM_001347657.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: AK134834.1, SRR1660815.182834.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849375, SAMN00849376 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTGGAAGG GAGGGAATCA GGAAGCAGTC ATCGAGGGGT CAGGTGGAGA ACTGGGGGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001334586.1 |
CDS | 31..1113 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001347657.2 |
1 | ATGTGGAAGG GAGGGAATCA GGAAGCAGTC ATCGAGGGGT CAGGTGGAGA ACTGGGGGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu39570 | |
Clone ID Related Accession (Same CDS sequence) | NM_001347657.2 , NM_001347657.1 | |
Accession Version | NM_001347657.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1083bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-03 | |
Organism | Mus musculus(house mouse) | |
Product | aspartate beta-hydroxylase domain-containing protein 1 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC122863.4. On Dec 3, 2016 this sequence version replaced XM_006507738.3. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: BQ175325.1, SRR1660815.182834.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849375, SAMN00849376 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTGGAAGG GAGGGAATCA GGAAGCAGTC ATCGAGGGGT CAGGTGGAGA ACTGGGGGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001334586.1 |
CDS | 453..1535 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001347657.1 |
1 | ATGTGGAAGG GAGGGAATCA GGAAGCAGTC ATCGAGGGGT CAGGTGGAGA ACTGGGGGTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu00745 | |
Clone ID Related Accession (Same CDS sequence) | NM_001039645.1 , NM_001039645.2 , NM_001361488.1 | |
Accession Version | NM_001039645.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 330bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-01 | |
Organism | Mus musculus(house mouse) | |
Product | aspartate beta-hydroxylase domain-containing protein 1 isoform 2 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC111101.1. ##Evidence-Data-START## Transcript exon combination :: BC111101.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164131, SAMN01164139 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAGTGCCA ATACCTTCGG CAATGCTGGC TTTTCCGTTC TACTGCCTGG GGCCCGGCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001034734.1 |
CDS | 96..425 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001039645.1 |
1 | ATGAGTGCCA ATACCTTCGG CAATGCTGGC TTTTCCGTTC TACTGCCTGG GGCCCGGCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu00745 | |
Clone ID Related Accession (Same CDS sequence) | NM_001039645.1 , NM_001039645.2 , NM_001361488.1 | |
Accession Version | NM_001039645.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 330bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-07-27 | |
Organism | Mus musculus(house mouse) | |
Product | aspartate beta-hydroxylase domain-containing protein 1 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK043553.1, BC111101.1 and BE950878.1. On Mar 26, 2018 this sequence version replaced NM_001039645.1. ##Evidence-Data-START## Transcript exon combination :: BC111101.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164131, SAMN01164139 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAGTGCCA ATACCTTCGG CAATGCTGGC TTTTCCGTTC TACTGCCTGG GGCCCGGCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001034734.1 |
CDS | 97..426 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001039645.2 |
1 | ATGAGTGCCA ATACCTTCGG CAATGCTGGC TTTTCCGTTC TACTGCCTGG GGCCCGGCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu00745 | |
Clone ID Related Accession (Same CDS sequence) | NM_001039645.1 , NM_001039645.2 , NM_001361488.1 | |
Accession Version | NM_001361488.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 330bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-24 | |
Organism | Mus musculus(house mouse) | |
Product | aspartate beta-hydroxylase domain-containing protein 1 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK043553.1 and BE950878.1. ##Evidence-Data-START## Transcript exon combination :: AK043553.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164131, SAMN01164138 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAGTGCCA ATACCTTCGG CAATGCTGGC TTTTCCGTTC TACTGCCTGG GGCCCGGCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001348417.1 |
CDS | 289..618 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001361488.1 |
1 | ATGAGTGCCA ATACCTTCGG CAATGCTGGC TTTTCCGTTC TACTGCCTGG GGCCCGGCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Embryonic forebrain transcriptome of mice with polyalanine expansion mutations in the ARX homeobox gene. |