Gene Symbol | Zfp553 |
Entrez Gene ID | 233887 |
Full Name | zinc finger protein 553 |
Synonyms | 2600009K23Rik,AI431057,BC026401,C330013F15Rik,Znf48 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Zfp553 cDNA ORF clone
Gene Symbol | Zfp553 |
Entrez Gene ID | 233887 |
Full Name | zinc finger protein 553 |
Synonyms | 2600009K23Rik,AI431057,BC026401,C330013F15Rik,Znf48 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_146201.1 | NP_666313.1 | zinc finger protein 48 |
XM_006507740.1 | XP_006507803.1 | zinc finger protein 48 isoform X2 |
XM_006507739.1 | XP_006507802.1 | zinc finger protein 48 isoform X1 |
NM_146201.2 | NP_666313.1 | zinc finger protein 48 |
NM_001360912.1 | NP_001347841.1 | zinc finger protein 48 |
Zfp553 Is Essential for Maintenance and Acquisition of Pluripotency.
Yu S, Ma H, Ow JR, Goh Z, Chiang R, Yang H, Loh YH, Wu Q
Stem cells and development25(1)55-67(2016 Jan)
Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst.
Guo G, Huss M, Tong GQ, Wang C, Li Sun L, Clarke ND, Robson P
Developmental cell18(4)675-85(2010 Apr)
A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58.
Yokoyama S, Ito Y, Ueno-Kudoh H, Shimizu H, Uchibe K, Albini S, Mitsuoka K, Miyaki S, Kiso M, Nagai A, Hikata T, Osada T, Fukuda N, Yamashita S, Harada D, Mezzano V, Kasai M, Puri PL, Hayashizaki Y, Okado H, Hashimoto M, Asahara H
Developmental cell17(6)836-48(2009 Dec)
High-throughput screen for genes predominantly expressed in the ICM of mouse blastocysts by whole mount in situ hybridization.
Yoshikawa T, Piao Y, Zhong J, Matoba R, Carter MG, Wang Y, Goldberg I, Ko MS
Gene expression patterns : GEP6(2)213-24(2006 Jan)
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC, Babbitt PC, Ferrin TE
Nucleic acids research31(1)278-81(2003 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Novel insights to a newly identified pluripotency factor Zfp553 and its role in pluripotency regulation.
Title: Zfp553 Is Essential for Maintenance and Acquisition of Pluripotency.
The following Zfp553 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Zfp553 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu12313 | |
Clone ID Related Accession (Same CDS sequence) | NM_146201.1 , XM_006507739.1 , NM_146201.2 , NM_001360912.1 | |
Accession Version | NM_146201.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1776bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-31 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 48 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC026401.1. ##Evidence-Data-START## Transcript exon combination :: BC026401.1, AK148378.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGAGGCTT CTCCGGGGGA TGAGTTTGAA CACTCACCAC AAGAGAGGGA TGGCCCAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_666313.1 |
CDS | 56..1831 |
Translation |
Target ORF information:
Target ORF information:
|
NM_146201.1 |
1 | ATGGAGGCTT CTCCGGGGGA TGAGTTTGAA CACTCACCAC AAGAGAGGGA TGGCCCAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu12313 | |
Clone ID Related Accession (Same CDS sequence) | NM_146201.1 , XM_006507739.1 , NM_146201.2 , NM_001360912.1 | |
Accession Version | NM_146201.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1776bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-23 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 48 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC133494.4 and AK049208.1. On Feb 17, 2018 this sequence version replaced NM_146201.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AK049208.1, AK148378.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGGCTT CTCCGGGGGA TGAGTTTGAA CACTCACCAC AAGAGAGGGA TGGCCCAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_666313.1 |
CDS | 438..2213 |
Translation |
Target ORF information:
Target ORF information:
|
NM_146201.2 |
1 | ATGGAGGCTT CTCCGGGGGA TGAGTTTGAA CACTCACCAC AAGAGAGGGA TGGCCCAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu12313 | |
Clone ID Related Accession (Same CDS sequence) | NM_146201.1 , XM_006507739.1 , NM_146201.2 , NM_001360912.1 | |
Accession Version | NM_001360912.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1776bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-23 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 48 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC133494.4 and AK146581.1. On Feb 17, 2018 this sequence version replaced XM_006507739.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AK146581.1, AK140924.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGGCTT CTCCGGGGGA TGAGTTTGAA CACTCACCAC AAGAGAGGGA TGGCCCAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001347841.1 |
CDS | 469..2244 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001360912.1 |
1 | ATGGAGGCTT CTCCGGGGGA TGAGTTTGAA CACTCACCAC AAGAGAGGGA TGGCCCAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu12313 | |
Clone ID Related Accession (Same CDS sequence) | NM_146201.1 , XM_006507739.1 , NM_146201.2 , NM_001360912.1 | |
Accession Version | XM_006507739.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1776bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 48 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000073.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGGCTT CTCCGGGGGA TGAGTTTGAA CACTCACCAC AAGAGAGGGA TGGCCCAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006507802.1 |
CDS | 275..2050 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006507739.1 |
1 | ATGGAGGCTT CTCCGGGGGA TGAGTTTGAA CACTCACCAC AAGAGAGGGA TGGCCCAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu39571 | |
Clone ID Related Accession (Same CDS sequence) | XM_006507740.1 | |
Accession Version | XM_006507740.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1494bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 48 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000073.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCTGATT TGGTGAAACA CCAGAGGACG CACACAGGGG AGAAGCCCTA CAAGTGTGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006507803.1 |
CDS | 187..1680 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006507740.1 |
1 | ATGTCTGATT TGGTGAAACA CCAGAGGACG CACACAGGGG AGAAGCCCTA CAAGTGTGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Zfp553 Is Essential for Maintenance and Acquisition of Pluripotency. |
Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst. |
A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58. |
High-throughput screen for genes predominantly expressed in the ICM of mouse blastocysts by whole mount in situ hybridization. |
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. |