Gene Symbol | Zfp438 |
Entrez Gene ID | 240186 |
Full Name | zinc finger protein 438 |
Synonyms | 9430031G09,9430091M14Rik,B830013J05Rik |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Zfp438 cDNA ORF clone
gRNAs
Gene Symbol | Zfp438 |
Entrez Gene ID | 240186 |
Full Name | zinc finger protein 438 |
Synonyms | 9430031G09,9430091M14Rik,B830013J05Rik |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_017317895.1 | XP_017173384.1 | zinc finger protein 438 isoform X2 |
NM_001360447.1 | NP_001347376.1 | zinc finger protein 438 |
XM_011246916.1 | XP_011245218.1 | zinc finger protein 438 isoform X1 |
XM_030250451.1 | XP_030106311.1 | zinc finger protein 438 isoform X2 |
XM_030250450.1 | XP_030106310.1 | zinc finger protein 438 isoform X2 |
XM_006525905.3 | XP_006525968.1 | zinc finger protein 438 isoform X1 |
XM_011246917.1 | XP_011245219.1 | zinc finger protein 438 isoform X2 |
NM_178722.5 | NP_848837.3 | zinc finger protein 438 |
Pan troglodytes (chimpanzee) | ZNF438 | XP_003312559.1 |
Bos taurus (cattle) | ZNF438 | NP_001137244.1 |
Mus musculus (house mouse) | Zfp438 | NP_848837.3 |
Rattus norvegicus (Norway rat) | Zfp438 | NP_001100828.1 |
Homo sapiens (human) | ZNF438 | NP_001137239.1 |
Canis lupus familiaris (dog) | ZNF438 | XP_005617098.1 |
Gallus gallus (chicken) | ZNF438 | XP_418576.1 |
Xenopus tropicalis (tropical clawed frog) | znf438 | XP_002940382.2 |
Danio rerio (zebrafish) | znf438 | NP_001070629.1 |
ZNF438 | XP_001088565.2 |
Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst.
Guo G, Huss M, Tong GQ, Wang C, Li Sun L, Clarke ND, Robson P
Developmental cell18(4)675-85(2010 Apr)
A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58.
Yokoyama S, Ito Y, Ueno-Kudoh H, Shimizu H, Uchibe K, Albini S, Mitsuoka K, Miyaki S, Kiso M, Nagai A, Hikata T, Osada T, Fukuda N, Yamashita S, Harada D, Mezzano V, Kasai M, Puri PL, Hayashizaki Y, Okado H, Hashimoto M, Asahara H
Developmental cell17(6)836-48(2009 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Zfp438 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Zfp438 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu07621 | |
Clone ID Related Accession (Same CDS sequence) | NM_001360447.1 , XM_011246916.1 , XM_006525905.3 , NM_178722.5 | |
Accession Version | NM_001360447.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2397bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-24 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 438 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC111128.24 and AC133945.2. On Feb 3, 2018 this sequence version replaced XM_006525905.3. Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants 1 and 2 encode the same protein. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: AK084655.1, SRR1660817.70660.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849381, SAMN00849382 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCGGAATT CTTCATCAGT ACCACCAAAA GATCAAGGTG AATCAAACAT CCGTTCTGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001347376.1 |
CDS | 200..2596 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCGGAATT CTTCATCAGT ACCACCAAAA GATCAAGGTG AATCAAACAT CCGTTCTGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu07621 | |
Clone ID Related Accession (Same CDS sequence) | NM_001360447.1 , XM_011246916.1 , XM_006525905.3 , NM_178722.5 | |
Accession Version | NM_178722.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2397bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-23 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 438 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK034745.1 and AK046812.1. On Sep 9, 2009 this sequence version replaced NM_178722.4. Transcript Variant: This variant (1) represents the longer transcript. Both variants 1 and 2 encode the same protein. ##Evidence-Data-START## Transcript exon combination :: AK046812.1, AK034745.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849381, SAMN00849382 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCGGAATT CTTCATCAGT ACCACCAAAA GATCAAGGTG AATCAAACAT CCGTTCTGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_848837.3 |
CDS | 204..2600 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCGGAATT CTTCATCAGT ACCACCAAAA GATCAAGGTG AATCAAACAT CCGTTCTGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu07621 | |
Clone ID Related Accession (Same CDS sequence) | NM_001360447.1 , XM_011246916.1 , XM_006525905.3 , NM_178722.5 | |
Accession Version | XM_011246916.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2397bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 438 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000084.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGGAATT CTTCATCAGT ACCACCAAAA GATCAAGGTG AATCAAACAT CCGTTCTGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011245218.1 |
CDS | 104..2500 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCGGAATT CTTCATCAGT ACCACCAAAA GATCAAGGTG AATCAAACAT CCGTTCTGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu07621 | |
Clone ID Related Accession (Same CDS sequence) | NM_001360447.1 , XM_011246916.1 , XM_006525905.3 , NM_178722.5 | |
Accession Version | XM_006525905.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2397bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 438 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000084.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006525905.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGGAATT CTTCATCAGT ACCACCAAAA GATCAAGGTG AATCAAACAT CCGTTCTGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006525968.1 |
CDS | 356..2752 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCGGAATT CTTCATCAGT ACCACCAAAA GATCAAGGTG AATCAAACAT CCGTTCTGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu73993 | |
Clone ID Related Accession (Same CDS sequence) | XM_017317895.1 , XM_030250451.1 , XM_030250450.1 , XM_011246917.1 | |
Accession Version | XM_017317895.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2202bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 438 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000084.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCCAAGC CTCTGGGCAT GCCCACCCAG AACTATGCTC TGATGCAGGT GGCTGGCCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017173384.1 |
CDS | 306..2507 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCCAAGC CTCTGGGCAT GCCCACCCAG AACTATGCTC TGATGCAGGT GGCTGGCCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu73993 | |
Clone ID Related Accession (Same CDS sequence) | XM_017317895.1 , XM_030250451.1 , XM_030250450.1 , XM_011246917.1 | |
Accession Version | XM_011246917.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2202bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 438 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000084.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCCAAGC CTCTGGGCAT GCCCACCCAG AACTATGCTC TGATGCAGGT GGCTGGCCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011245219.1 |
CDS | 357..2558 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCCAAGC CTCTGGGCAT GCCCACCCAG AACTATGCTC TGATGCAGGT GGCTGGCCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu73993 | |
Clone ID Related Accession (Same CDS sequence) | XM_017317895.1 , XM_030250451.1 , XM_030250450.1 , XM_011246917.1 | |
Accession Version | XM_030250451.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2202bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 438 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000084.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCCAAGC CTCTGGGCAT GCCCACCCAG AACTATGCTC TGATGCAGGT GGCTGGCCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_030106311.1 |
CDS | 916..3117 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCCAAGC CTCTGGGCAT GCCCACCCAG AACTATGCTC TGATGCAGGT GGCTGGCCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu73993 | |
Clone ID Related Accession (Same CDS sequence) | XM_017317895.1 , XM_030250451.1 , XM_030250450.1 , XM_011246917.1 | |
Accession Version | XM_030250450.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2202bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | zinc finger protein 438 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000084.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCCAAGC CTCTGGGCAT GCCCACCCAG AACTATGCTC TGATGCAGGT GGCTGGCCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_030106310.1 |
CDS | 935..3136 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCCAAGC CTCTGGGCAT GCCCACCCAG AACTATGCTC TGATGCAGGT GGCTGGCCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst. |
A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58. |