Gene Symbol | Sart3 |
Entrez Gene ID | 53890 |
Full Name | squamous cell carcinoma antigen recognized by T cells 3 |
Synonyms | AU045857,mKIAA0156 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Sart3 cDNA ORF clone
Gene Symbol | Sart3 |
Entrez Gene ID | 53890 |
Full Name | squamous cell carcinoma antigen recognized by T cells 3 |
Synonyms | AU045857,mKIAA0156 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006530405.1 | XP_006530468.1 | squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 |
NM_016926.1 | NP_058622.1 | squamous cell carcinoma antigen recognized by T-cells 3 |
XM_017320991.1 | XP_017176480.1 | squamous cell carcinoma antigen recognized by T-cells 3 isoform X3 |
XM_030254699.1 | XP_030110559.1 | squamous cell carcinoma antigen recognized by T-cells 3 isoform X2 |
XM_006530406.1 | XP_006530469.1 | squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 |
NM_016926.2 | NP_058622.1 | squamous cell carcinoma antigen recognized by T-cells 3 isoform 2 |
NM_001356623.1 | NP_001343552.1 | squamous cell carcinoma antigen recognized by T-cells 3 isoform 3 |
NM_001356621.1 | NP_001343550.1 | squamous cell carcinoma antigen recognized by T-cells 3 isoform 1 |
Pan troglodytes (chimpanzee) | SART3 | XP_001163755.1 |
Canis lupus familiaris (dog) | SART3 | XP_005636398.1 |
Bos taurus (cattle) | SART3 | NP_001095330.1 |
SART3 | XP_001102668.1 | |
Danio rerio (zebrafish) | sart3 | NP_001025289.1 |
Oryza sativa (rice) | Os08g0113200 | NP_001060838.1 |
Mus musculus (house mouse) | Sart3 | NP_058622.1 |
Rattus norvegicus (Norway rat) | Sart3 | NP_001100626.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP002959 | XP_001237407.3 |
Arabidopsis thaliana (thale cress) | EMB140 | NP_194158.3 |
Homo sapiens (human) | SART3 | NP_055521.1 |
Gallus gallus (chicken) | SART3 | XP_004945668.1 |
Caenorhabditis elegans (roundworm) | B0035.12 | NP_502136.1 |
Tip110 Deletion Impaired Embryonic and Stem Cell Development Involving Downregulation of Stem Cell Factors Nanog, Oct4, and Sox2.
Whitmill A, Liu Y, Timani KA, Niu Y, He JJ
Stem cells (Dayton, Ohio)35(7)1674-1686(2017 Jul)
TIP110/p110nrb/SART3/p110 regulation of hematopoiesis through CMYC.
Liu Y, Timani K, Mantel C, Fan Y, Hangoc G, Cooper S, He JJ, Broxmeyer HE
Blood117(21)5643-51(2011 May)
A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain.
McKee AE, Minet E, Stern C, Riahi S, Stiles CD, Silver PA
BMC developmental biology514(2005 Jul)
Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.
Okazaki N, Kikuno R, Ohara R, Inamoto S, Koseki H, Hiraoka S, Saga Y, Nagase T, Ohara O, Koga H
DNA research : an international journal for rapid publication of reports on genes and genomes10(4)167-80(2003 Aug)
Targeting of U4/U6 small nuclear RNP assembly factor SART3/p110 to Cajal bodies.
Stan?k D, Rader SD, Klingauf M, Neugebauer KM
The Journal of cell biology160(4)505-16(2003 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Sart3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Sart3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu10741 | |
Clone ID Related Accession (Same CDS sequence) | NM_016926.1 , NM_016926.2 | |
Accession Version | NM_016926.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2889bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-04-24 | |
Organism | Mus musculus(House mouse) | |
Product | squamous cell carcinoma antigen recognized by T-cells 3 | |
Comment | PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF172722.1. ##Evidence-Data-START## Transcript exon combination :: AF172722.1, AK086398.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849375 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCGACGA CGGCCGCATC TTCGGCGTCC GAGCCGGAGG TTGAGCCCCA GGCCGGGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_058622.1 |
CDS | 15..2903 |
Translation |
Target ORF information:
Target ORF information:
|
NM_016926.1 |
1 | ATGGCGACGA CGGCCGCATC TTCGGCGTCC GAGCCGGAGG TTGAGCCCCA GGCCGGGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu10741 | |
Clone ID Related Accession (Same CDS sequence) | NM_016926.1 , NM_016926.2 | |
Accession Version | NM_016926.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2889bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-19 | |
Organism | Mus musculus(house mouse) | |
Product | squamous cell carcinoma antigen recognized by T-cells 3 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC132939.23 and AK086398.1. On Oct 12, 2017 this sequence version replaced NM_016926.1. Transcript Variant: This variant (2) uses an alternate in-frame splice junction compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: BC057156.1, SRR1660815.215331.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849375 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCGACGA CGGCCGCATC TTCGGCGTCC GAGCCGGAGG TTGAGCCCCA GGCCGGGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_058622.1 |
CDS | 766..3654 |
Translation |
Target ORF information:
Target ORF information:
|
NM_016926.2 |
1 | ATGGCGACGA CGGCCGCATC TTCGGCGTCC GAGCCGGAGG TTGAGCCCCA GGCCGGGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu35955 | |
Clone ID Related Accession (Same CDS sequence) | XM_006530405.1 , NM_001356621.1 | |
Accession Version | NM_001356621.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2943bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-22 | |
Organism | Mus musculus(house mouse) | |
Product | squamous cell carcinoma antigen recognized by T-cells 3 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC132939.23. On Oct 12, 2017 this sequence version replaced XM_006530405.1. Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660817.273059.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849375 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCGACGA CGGCCGCATC TTCGGCGTCC GAGCCGGAGG TTGAGCCCCA GGCCGGGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001343550.1 |
CDS | 766..3708 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001356621.1 |
1 | ATGGCGACGA CGGCCGCATC TTCGGCGTCC GAGCCGGAGG TTGAGCCCCA GGCCGGGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu35955 | |
Clone ID Related Accession (Same CDS sequence) | XM_006530405.1 , NM_001356621.1 | |
Accession Version | XM_006530405.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2943bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(House mouse) | |
Product | squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGACGA CGGCCGCATC TTCGGCGTCC GAGCCGGAGG TTGAGCCCCA GGCCGGGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006530468.1 |
CDS | 871..3813 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006530405.1 |
1 | ATGGCGACGA CGGCCGCATC TTCGGCGTCC GAGCCGGAGG TTGAGCCCCA GGCCGGGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu35956 | |
Clone ID Related Accession (Same CDS sequence) | XM_006530406.1 | |
Accession Version | XM_006530406.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2529bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGTGAGC TCTTCCCCCT GACCGAAGAG CTCTGGCTGG AGTGGCTCCA CGATGAGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006530469.1 |
CDS | 260..2788 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006530406.1 |
1 | ATGAGTGAGC TCTTCCCCCT GACCGAAGAG CTCTGGCTGG AGTGGCTCCA CGATGAGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu81426 | |
Clone ID Related Accession (Same CDS sequence) | XM_017320991.1 , NM_001356623.1 | |
Accession Version | NM_001356623.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1722bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-22 | |
Organism | Mus musculus(house mouse) | |
Product | squamous cell carcinoma antigen recognized by T-cells 3 isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC132939.23. On Oct 12, 2017 this sequence version replaced XM_017320991.1. Transcript Variant: This variant (3) uses an alternate splice junction compared to variant 1. The resulting isoform (3) is shorter at the N-terminus compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660817.257070.1, SRR1660815.8477.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849375 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGCGAC ATGGACTGGA CCATCAAACG ATTTCTGCGA CCTTCGAGAA CGCTCTGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001343552.1 |
CDS | 1922..3643 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001356623.1 |
1 | ATGGAGCGAC ATGGACTGGA CCATCAAACG ATTTCTGCGA CCTTCGAGAA CGCTCTGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu81426 | |
Clone ID Related Accession (Same CDS sequence) | XM_017320991.1 , NM_001356623.1 | |
Accession Version | XM_017320991.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1722bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(House mouse) | |
Product | squamous cell carcinoma antigen recognized by T-cells 3 isoform X3 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGCGAC ATGGACTGGA CCATCAAACG ATTTCTGCGA CCTTCGAGAA CGCTCTGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017176480.1 |
CDS | 2027..3748 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017320991.1 |
1 | ATGGAGCGAC ATGGACTGGA CCATCAAACG ATTTCTGCGA CCTTCGAGAA CGCTCTGAGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu88969 | |
Clone ID Related Accession (Same CDS sequence) | XM_030254699.1 | |
Accession Version | XM_030254699.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2475bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | squamous cell carcinoma antigen recognized by T-cells 3 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGTGAGC TCTTCCCCCT GACCGAAGAG CTCTGGCTGG AGTGGCTCCA CGATGAGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_030110559.1 |
CDS | 557..3031 |
Translation |
Target ORF information:
Target ORF information:
|
XM_030254699.1 |
1 | ATGAGTGAGC TCTTCCCCCT GACCGAAGAG CTCTGGCTGG AGTGGCTCCA CGATGAGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Tip110 Deletion Impaired Embryonic and Stem Cell Development Involving Downregulation of Stem Cell Factors Nanog, Oct4, and Sox2. |
TIP110/p110nrb/SART3/p110 regulation of hematopoiesis through CMYC. |
A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain. |
Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. |
Targeting of U4/U6 small nuclear RNP assembly factor SART3/p110 to Cajal bodies. |