Gene Symbol | P3h1 |
Entrez Gene ID | 56401 |
Full Name | prolyl 3-hydroxylase 1 |
Synonyms | 2410024C15Rik,Gros1,Lepre1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » P3h1 cDNA ORF clone
Gene Symbol | P3h1 |
Entrez Gene ID | 56401 |
Full Name | prolyl 3-hydroxylase 1 |
Synonyms | 2410024C15Rik,Gros1,Lepre1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001286148.1 | NP_001273077.1 | prolyl 3-hydroxylase 1 isoform 4 precursor |
NM_019783.2 | NP_062757.2 | prolyl 3-hydroxylase 1 isoform 2 precursor |
NM_001042411.1 | NP_001035874.1 | prolyl 3-hydroxylase 1 isoform 3 |
NM_019782.3 | NP_062756.2 | prolyl 3-hydroxylase 1 isoform 1 precursor |
LEPRE1 | XP_001088904.1 | |
Mus musculus (house mouse) | Lepre1 | NP_062757.2 |
Homo sapiens (human) | LEPRE1 | NP_071751.3 |
Rattus norvegicus (Norway rat) | Lepre1 | NP_446119.1 |
Gallus gallus (chicken) | LEPRE1 | NP_001001529.1 |
Danio rerio (zebrafish) | lepre1 | XP_002663865.1 |
Xenopus tropicalis (tropical clawed frog) | lepre1 | NP_001090700.1 |
Pan troglodytes (chimpanzee) | LEPRE1 | XP_003308086.1 |
Canis lupus familiaris (dog) | LEPRE1 | XP_848570.2 |
Bos taurus (cattle) | LEPRE1 | NP_001096761.1 |
Bone matrix hypermineralization in prolyl-3 hydroxylase 1 deficient mice.
Fratzl-Zelman N, B?chinger HP, Vranka JA, Roschger P, Klaushofer K, Rauch F
Bone8515-22(2016 Apr)
Resistance to noise-induced hearing loss in 129S6 and MOLF mice: identification of independent, overlapping, and interacting chromosomal regions.
Street VA, Kujawa SG, Manichaikul A, Broman KW, Kallman JC, Shilling DJ, Iwata AJ, Robinson LC, Robbins CA, Li J, Liberman MC, Tempel BL
Journal of the Association for Research in Otolaryngology : JARO15(5)721-38(2014 Oct)
Differential effects of collagen prolyl 3-hydroxylation on skeletal tissues.
Homan EP, Lietman C, Grafe I, Lennington J, Morello R, Napierala D, Jiang MM, Munivez EM, Dawson B, Bertin TK, Chen Y, Lua R, Lichtarge O, Hicks J, Weis MA, Eyre D, Lee BH
PLoS genetics10(1)e1004121(2014 Jan)
An additional function of the rough endoplasmic reticulum protein complex prolyl 3-hydroxylase 1?cartilage-associated protein?cyclophilin B: the CXXXC motif reveals disulfide isomerase activity in vitro.
Ishikawa Y, B?chinger HP
The Journal of biological chemistry288(44)31437-46(2013 Nov)
Posttranslational modifications in type I collagen from different tissues extracted from wild type and prolyl 3-hydroxylase 1 null mice.
Pokidysheva E, Zientek KD, Ishikawa Y, Mizuno K, Vranka JA, Montgomery NT, Keene DR, Kawaguchi T, Okuyama K, B?chinger HP
The Journal of biological chemistry288(34)24742-52(2013 Aug)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
P3H1 deficiency leads to decreased deposition of extracellular matrix by osteoblasts and increased incorporation of mineral into the matrix.
Title: Bone matrix hypermineralization in prolyl-3 hydroxylase 1 deficient mice.
we generated knock-in mice carrying a single amino acid substitution in the catalytic site of P3h1 (Lepre1(H662A) ). This substitution abolished P3h1 activity but retained ability to form a complex with Crtap and thus the collagen chaperone
Title: Differential effects of collagen prolyl 3-hydroxylation on skeletal tissues.
An additional function of the rough endoplasmic reticulum protein complex prolyl 3-hydroxylase 1.cartilage-associated protein.cyclophilin B: the CXXXC motif reveals disulfide isomerase activity in vitro.
Title: An additional function of the rough endoplasmic reticulum protein complex prolyl 3-hydroxylase 1?cartilage-associated protein?cyclophilin B: the CXXXC motif reveals disulfide isomerase activity in vitro.
The absence of 3-hydroxyproline and/or the increased glycosylation of hydroxylysine in type I collagen disturbs the lateral growth of the fibrils.
Title: Posttranslational modifications in type I collagen from different tissues extracted from wild type and prolyl 3-hydroxylase 1 null mice.
The LEPRE1 knockout mouse is a valuable model system to investigate the mechanism of hearing loss in recessive osteogenesis imperfecta.
Title: Prolyl 3-hydroxylase-1 null mice exhibit hearing impairment and abnormal morphology of the middle ear bone joints.
The following P3h1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the P3h1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu00877 | |
Clone ID Related Accession (Same CDS sequence) | NM_001042411.1 | |
Accession Version | NM_001042411.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1683bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-19 | |
Organism | Mus musculus(house mouse) | |
Product | prolyl 3-hydroxylase 1 isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY240019.1, AK159505.1, AK010578.1, AK030436.1 and CO040878.1. Transcript Variant: This variant (3) differs in the 5' and 3' UTRs, initiates translation at a downstream start codon and uses alternate splice sites in the 3' coding region, compared to variant 1. It encodes isoform 3, which is shorter and has a distinct C-terminus, compared to isoform 1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK159505.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN01164131 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGATGC GGCAGAACCT CGACTATTAC CAAACCATGT CTGGGGTGAA GGAGGCAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001035874.1 |
CDS | 214..1896 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001042411.1 |
1 | ATGGAGATGC GGCAGAACCT CGACTATTAC CAAACCATGT CTGGGGTGAA GGAGGCAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu11450 | |
Clone ID Related Accession (Same CDS sequence) | NM_019782.3 | |
Accession Version | NM_019782.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2247bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-20 | |
Organism | Mus musculus(house mouse) | |
Product | prolyl 3-hydroxylase 1 isoform 1 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK010578.1, CX563255.1, AK030436.1 and CO040878.1. On Oct 31, 2013 this sequence version replaced NM_019782.2. Transcript Variant: This variant (1) encodes the longest isoform (1). Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849375 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCGGTGA GCGAAAGGAG GCTGCTGGCA GCGATGCTAG CGGTCGCCGC CGCCGCCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_062756.2 |
CDS | 43..2289 |
Translation |
Target ORF information:
Target ORF information:
|
NM_019782.3 |
1 | ATGGCGGTGA GCGAAAGGAG GCTGCTGGCA GCGATGCTAG CGGTCGCCGC CGCCGCCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu11451 | |
Clone ID Related Accession (Same CDS sequence) | NM_019783.2 | |
Accession Version | NM_019783.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2220bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-19 | |
Organism | Mus musculus(house mouse) | |
Product | prolyl 3-hydroxylase 1 isoform 2 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK010578.1, AK030436.1 and CO040878.1. On Jun 16, 2006 this sequence version replaced NM_019783.1. Transcript Variant: This variant (2) uses alternate splice sites in the 3' coding region and differs in the 3' UTR, compared to variant 1. It encodes isoform 2, which is shorter and has a distinct C-terminus, compared to isoform 1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK030436.1, SRR1660819.181903.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCGGTGA GCGAAAGGAG GCTGCTGGCA GCGATGCTAG CGGTCGCCGC CGCCGCCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_062757.2 |
CDS | 43..2262 |
Translation |
Target ORF information:
Target ORF information:
|
NM_019783.2 |
1 | ATGGCGGTGA GCGAAAGGAG GCTGCTGGCA GCGATGCTAG CGGTCGCCGC CGCCGCCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu17163 | |
Clone ID Related Accession (Same CDS sequence) | NM_001286148.1 | |
Accession Version | NM_001286148.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2241bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-21 | |
Organism | Mus musculus(house mouse) | |
Product | prolyl 3-hydroxylase 1 isoform 4 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BB617770.1, AK132262.1, AK159505.1, AK010578.1 and CO040878.1. Transcript Variant: This variant (4) uses alternate splice sites in the 3' coding region and differs in the 3' UTR, compared to variant 1. It encodes isoform 4, which is shorter and has a distinct C-terminus, compared to isoform 1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK132262.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164131, SAMN01164134 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCGGTGA GCGAAAGGAG GCTGCTGGCA GCGATGCTAG CGGTCGCCGC CGCCGCCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001273077.1 |
CDS | 43..2283 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001286148.1 |
1 | ATGGCGGTGA GCGAAAGGAG GCTGCTGGCA GCGATGCTAG CGGTCGCCGC CGCCGCCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Bone matrix hypermineralization in prolyl-3 hydroxylase 1 deficient mice. |
Resistance to noise-induced hearing loss in 129S6 and MOLF mice: identification of independent, overlapping, and interacting chromosomal regions. |
Differential effects of collagen prolyl 3-hydroxylation on skeletal tissues. |
An additional function of the rough endoplasmic reticulum protein complex prolyl 3-hydroxylase 1?cartilage-associated protein?cyclophilin B: the CXXXC motif reveals disulfide isomerase activity in vitro. |
Posttranslational modifications in type I collagen from different tissues extracted from wild type and prolyl 3-hydroxylase 1 null mice. |