Gene Symbol | Clstn2 |
Entrez Gene ID | 64085 |
Full Name | calsyntenin 2 |
Synonyms | 2900042C18Rik,AI448973,CSTN2,Cs2,Cst-2,mKIAA4134 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Clstn2 cDNA ORF clone
gRNAs
Gene Symbol | Clstn2 |
Entrez Gene ID | 64085 |
Full Name | calsyntenin 2 |
Synonyms | 2900042C18Rik,AI448973,CSTN2,Cs2,Cst-2,mKIAA4134 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006511334.3 | XP_006511397.1 | calsyntenin-2 isoform X1 |
NM_022319.2 | NP_071714.2 | calsyntenin-2 precursor |
XM_006511334.4 | XP_006511397.1 | calsyntenin-2 isoform X1 |
Pan troglodytes (chimpanzee) | CLSTN2 | XP_526327.2 |
CLSTN2 | XP_001113205.1 | |
Bos taurus (cattle) | CLSTN2 | NP_001193686.1 |
Mus musculus (house mouse) | Clstn2 | NP_071714.2 |
Drosophila melanogaster (fruit fly) | Cals | NP_726646.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP007103 | XP_001237120.2 |
Homo sapiens (human) | CLSTN2 | NP_071414.2 |
Canis lupus familiaris (dog) | CLSTN2 | XP_534287.3 |
Rattus norvegicus (Norway rat) | Clstn2 | NP_599204.1 |
Xenopus tropicalis (tropical clawed frog) | clstn2 | XP_002941239.2 |
Gallus gallus (chicken) | CLSTN2 | XP_422633.4 |
Danio rerio (zebrafish) | clstn2 | NP_001153311.1 |
Features of emotional and social behavioral phenotypes of calsyntenin2 knockout mice.
Ranneva SV, Pavlov KS, Gromova AV, Amstislavskaya TG, Lipina TV
Behavioural brain research332343-354(2017 08)
A dual-strategy expression screen for candidate connectivity labels in the developing thalamus.
Bibollet-Bahena O, Okafuji T, Hokamp K, Tear G, Mitchell KJ
PloS one12(5)e0177977(2017)
Cognitive Deficits in Calsyntenin-2-deficient Mice Associated with Reduced GABAergic Transmission.
Lipina TV, Prasad T, Yokomaku D, Luo L, Connor SA, Kawabe H, Wang YT, Brose N, Roder JC, Craig AM
Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology41(3)802-10(2016 Feb)
Spatiotemporal regulation of GLI target genes in the mammalian limb bud.
Lewandowski JP, Du F, Zhang S, Powell MB, Falkenstein KN, Ji H, Vokes SA
Developmental biology406(1)92-103(2015 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Study explored the in vivo effects of calsyntenin-2 deficiency on emotional and social behavioral endophenotypes in a mouse, found a striking effect of sex on expression of social behavior and emotionality in Clstn2-knock-out mice, but hyperactivity coupled with pronounced repetitive behavior was observed in Clstn2-knock-out mice of both sexes.
Title: Features of emotional and social behavioral phenotypes of calsyntenin2 knockout mice.
Results confirm a function for calsyntenin-2 in cognitive performance and indicate an underlying mechanism that involves parvalbumin interneurons and aberrant inhibitory transmission
Title: Cognitive Deficits in Calsyntenin-2-deficient Mice Associated with Reduced GABAergic Transmission.
The following Clstn2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Clstn2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu42903 | |
Clone ID Related Accession (Same CDS sequence) | XM_006511334.3 , XM_006511334.4 | |
Accession Version | XM_006511334.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2883bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | calsyntenin-2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000075.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006511334.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGCCGG GGAGGCTGTG CTTGGTGCCG CTCCTGCTGG CGCTGGGCGT AGGGAGCGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006511397.1 |
CDS | 413..3295 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCTGCCGG GGAGGCTGTG CTTGGTGCCG CTCCTGCTGG CGCTGGGCGT AGGGAGCGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu12596 | |
Clone ID Related Accession (Same CDS sequence) | NM_022319.2 | |
Accession Version | NM_022319.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2901bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-25 | |
Organism | Mus musculus(house mouse) | |
Product | calsyntenin-2 precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC063058.1. On Dec 20, 2003 this sequence version replaced NM_022319.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC063058.1, AK220500.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164139 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCTGCCGG GGAGGCTGTG CTTGGTGCCG CTCCTGCTGG CGCTGGGCGT AGGGAGCGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_071714.2 |
CDS | 193..3093 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCTGCCGG GGAGGCTGTG CTTGGTGCCG CTCCTGCTGG CGCTGGGCGT AGGGAGCGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu42903 | |
Clone ID Related Accession (Same CDS sequence) | XM_006511334.3 , XM_006511334.4 | |
Accession Version | XM_006511334.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2883bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | calsyntenin-2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000075.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006511334.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGCCGG GGAGGCTGTG CTTGGTGCCG CTCCTGCTGG CGCTGGGCGT AGGGAGCGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006511397.1 |
CDS | 399..3281 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCTGCCGG GGAGGCTGTG CTTGGTGCCG CTCCTGCTGG CGCTGGGCGT AGGGAGCGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Features of emotional and social behavioral phenotypes of calsyntenin2 knockout mice. |
A dual-strategy expression screen for candidate connectivity labels in the developing thalamus. |
Cognitive Deficits in Calsyntenin-2-deficient Mice Associated with Reduced GABAergic Transmission. |
Spatiotemporal regulation of GLI target genes in the mammalian limb bud. |