Gene Symbol | 4930579F01Rik |
Entrez Gene ID | 67741 |
Full Name | RIKEN cDNA 4930579F01 gene |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » 4930579F01Rik cDNA ORF clone
Gene Symbol | 4930579F01Rik |
Entrez Gene ID | 67741 |
Full Name | RIKEN cDNA 4930579F01 gene |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001163386.1 | NP_001156858.1 | uncharacterized protein C4orf17 homolog isoform 2 |
NM_001374685.1 | NP_001361614.1 | uncharacterized protein C4orf17 homolog isoform 2 |
XM_006501945.3 | XP_006502008.1 | uncharacterized protein C4orf17 homolog isoform X1 |
XM_006501946.3 | XP_006502009.1 | uncharacterized protein C4orf17 homolog isoform X2 |
NM_001163385.1 | NP_001156857.1 | uncharacterized protein C4orf17 homolog isoform 1 |
Canis lupus familiaris (dog) | C32H4orf17 | XP_535668.3 |
Rattus norvegicus (Norway rat) | RGD1309170 | NP_001128051.1 |
Pan troglodytes (chimpanzee) | C4H4orf17 | XP_001167179.1 |
Mus musculus (house mouse) | 4930579F01Rik | NP_001156857.1 |
Homo sapiens (human) | C4orf17 | NP_115525.2 |
Bos taurus (cattle) | C6H4orf17 | NP_001073792.1 |
C5H4orf17 | XP_001107218.2 |
A conditional knockout resource for the genome-wide study of mouse gene function.
Skarnes WC, Rosen B, West AP, Koutsourakis M, Bushell W, Iyer V, Mujica AO, Thomas M, Harrow J, Cox T, Jackson D, Severin J, Biggs P, Fu J, Nefedov M, de Jong PJ, Stewart AF, Bradley A
Nature474(7351)337-42(2011 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following 4930579F01Rik gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the 4930579F01Rik cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu08953 | |
Clone ID Related Accession (Same CDS sequence) | NM_001163385.1 | |
Accession Version | NM_001163385.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 978bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-08 | |
Organism | Mus musculus(house mouse) | |
Product | uncharacterized protein C4orf17 homolog isoform 1 | |
Comment | Comment: PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from AC131122.4. On or before Jul 19, 2009 this sequence version replaced XM_915516.3, XM_131242.4. Transcript Variant: This variant (1) encodes the longer predicted protein (isoform 1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments with BC150693.1. ##Evidence-Data-START## Transcript exon combination :: BC150693.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849384 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCTCCCG TGGACACGGG AGGACATGGG AGGAGAAGGG AAAGAGCATC AACAAACGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001156857.1 |
CDS | 507..1484 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001163385.1 |
1 | ATGGCTCCCG TGGACACGGG AGGACATGGG AGGAGAAGGG AAAGAGCATC AACAAACGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu08954 | |
Clone ID Related Accession (Same CDS sequence) | NM_001163386.1 , NM_001374685.1 , XM_006501946.3 | |
Accession Version | NM_001163386.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 603bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-08 | |
Organism | Mus musculus(house mouse) | |
Product | uncharacterized protein C4orf17 homolog isoform 2 | |
Comment | Comment: PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from AC131122.4. Transcript Variant: This variant (2) uses an alternate first splice donor site and the predicted protein (isoform 2) initiates from an internal AUG compared to variant 1. Variants 2 and 3 both encode the same isoform (2). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignment with AK016318.1. ##Evidence-Data-START## Transcript exon combination :: AK016318.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849384 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTGCTCTG CCGCTGCCTT CCAATCCTCA GACGCGATGA GCAACAGAAT GGATGGGAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001156858.1 |
CDS | 765..1367 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001163386.1 |
1 | ATGTGCTCTG CCGCTGCCTT CCAATCCTCA GACGCGATGA GCAACAGAAT GGATGGGAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu08954 | |
Clone ID Related Accession (Same CDS sequence) | NM_001163386.1 , NM_001374685.1 , XM_006501946.3 | |
Accession Version | XM_006501946.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 603bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | uncharacterized protein C4orf17 homolog isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000069.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006501946.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGCTCTG CCGCTGCCTT CCAATCCTCA GACGCGATGA GCAACAGAAT GGATGGGAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006502009.1 |
CDS | 206..808 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006501946.3 |
1 | ATGTGCTCTG CCGCTGCCTT CCAATCCTCA GACGCGATGA GCAACAGAAT GGATGGGAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu32208 | |
Clone ID Related Accession (Same CDS sequence) | XM_006501945.3 | |
Accession Version | XM_006501945.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 984bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | uncharacterized protein C4orf17 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000069.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006501945.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGAGTG TCGGAGGCTG CTTTATAGTC AGGCACACGC CTCATCCCAG AAGAGTTTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006502008.1 |
CDS | 667..1650 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006501945.3 |
1 | ATGGAGAGTG TCGGAGGCTG CTTTATAGTC AGGCACACGC CTCATCCCAG AAGAGTTTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu08954 | |
Clone ID Related Accession (Same CDS sequence) | NM_001163386.1 , NM_001374685.1 , XM_006501946.3 | |
Accession Version | NM_001374685.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 603bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-08 | |
Organism | Mus musculus(house mouse) | |
Product | uncharacterized protein C4orf17 homolog isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC163628.5 and AC131122.4. Transcript Variant: This variant (3), as well as variant 2, encodes isoform 2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR5189685.164367.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849384 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## CDS uses downstream in-frame AUG :: upstream AUG and CDS extension is not conserved ##RefSeq-Attributes-END## COMPLETENESS: full length. |
1 | ATGTGCTCTG CCGCTGCCTT CCAATCCTCA GACGCGATGA GCAACAGAAT GGATGGGAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001361614.1 |
CDS | 639..1241 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001374685.1 |
1 | ATGTGCTCTG CCGCTGCCTT CCAATCCTCA GACGCGATGA GCAACAGAAT GGATGGGAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A conditional knockout resource for the genome-wide study of mouse gene function. |