Gene Symbol | B230118H07Rik |
Entrez Gene ID | 68170 |
Full Name | RIKEN cDNA B230118H07 gene |
Synonyms | NWC |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » B230118H07Rik cDNA ORF clone
Gene Symbol | B230118H07Rik |
Entrez Gene ID | 68170 |
Full Name | RIKEN cDNA B230118H07 gene |
Synonyms | NWC |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006500094.3 | XP_006500157.1 | uncharacterized protein C11orf74 homolog isoform X1 |
NM_001362687.1 | NP_001349616.1 | protein C11orf74 homolog isoform 1 |
NM_026592.4 | NP_080868.1 | protein C11orf74 homolog isoform 1 |
NM_026592.3 | NP_080868.1 | uncharacterized protein C11orf74 homolog |
NM_001362688.1 | NP_001349617.1 | protein C11orf74 homolog isoform 2 |
XM_006500095.3 | XP_006500158.1 | uncharacterized protein C11orf74 homolog isoform X2 |
Mus musculus (house mouse) | B230118H07Rik | NP_080868.1 |
Homo sapiens (human) | C11orf74 | NP_001263652.1 |
Canis lupus familiaris (dog) | C18H11orf74 | XP_533151.3 |
C14H11orf74 | XP_001114718.1 | |
Bos taurus (cattle) | C15H11orf74 | NP_001029922.1 |
Pan troglodytes (chimpanzee) | C11H11orf74 | XP_001155047.1 |
Rattus norvegicus (Norway rat) | RGD1309730 | NP_001099961.2 |
Search for the Function of NWC, Third Gene Within RAG Locus: Generation and Characterization of NWC-Deficient Mice.
Kasztura M, Sniezewski L, Laszkiewicz A, Majkowski M, Kobak K, Peczek K, Janik S, Kapusniak V, Miazek A, Cebrat M, Kisielow P
Archivum immunologiae et therapiae experimentalis64(4)311-9(2016 Aug)
Ikaros and RAG-2-mediated antisense transcription are responsible for lymphocyte-specific inactivation of NWC promoter.
Laszkiewicz A, Bzdzion ?, Kasztura M, Snie?ewski L, Janik S, Kisielow P, Cebrat M
PloS one9(9)e106927(2014)
Bidirectional activity of the NWC promoter is responsible for RAG-2 transcription in non-lymphoid cells.
Laszkiewicz A, Sniezewski L, Kasztura M, Bzdzion L, Cebrat M, Kisielow P
PloS one7(9)e44807(2012)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
functional inactivation of NWC does not cause any gross developmental, physiological or reproductive abnormalities, and that under physiological conditions NWC may be involved in assembling and functioning of cilia
Title: Search for the Function of NWC, Third Gene Within RAG Locus: Generation and Characterization of NWC-Deficient Mice.
Ikaros, a lymphocyte-specific transcription factor, acts as a repressor of NWC promoter--thus identifying a new Ikaros target--but is insufficient for inducing methylation which depends on antisense transcription driven by RAG-2 promoter
Title: Ikaros and RAG-2-mediated antisense transcription are responsible for lymphocyte-specific inactivation of NWC promoter.
Bidirectional activity of the NWC promoter is responsible for RAG-2 transcription in non-lymphoid cells
Title: Bidirectional activity of the NWC promoter is responsible for RAG-2 transcription in non-lymphoid cells.
Careful analysis of the Rag2 intergenic region uncovered a second evolutionarily conserved Nwc promoter region from which a previously unknown Nwc transcript can be generated in nonlymphocytes of Nwctmpro1 and normal mice.
Title: Complexity of transcriptional regulation within the Rag locus: identification of a second Nwc promoter region within the Rag2 intron.
These results indicate that accessibility of NWC promoter and RAG promoters to trans-acting factors is regulated by different epigenetic mechanisms.
Title: Mechanism of lymphocyte-specific inactivation of RAG-2 intragenic promoter of NWC: implications for epigenetic control of RAG locus.
The following B230118H07Rik gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the B230118H07Rik cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu30835 | |
Clone ID Related Accession (Same CDS sequence) | XM_006500095.3 | |
Accession Version | XM_006500095.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 396bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | uncharacterized protein C11orf74 homolog isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000068.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006500095.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCCGGG CTGGAAAGGT GAAGGTAGAC AACTTCCTAG ACTTAGAAGA TGTGGACATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006500158.1 |
CDS | 659..1054 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006500095.3 |
1 | ATGACCCGGG CTGGAAAGGT GAAGGTAGAC AACTTCCTAG ACTTAGAAGA TGTGGACATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu15192 | |
Clone ID Related Accession (Same CDS sequence) | NM_001362687.1 , NM_026592.4 , NM_026592.3 | |
Accession Version | NM_001362687.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 735bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-30 | |
Organism | Mus musculus(house mouse) | |
Product | protein C11orf74 homolog isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL929569.13. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: AK088637.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164141 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCTTGCTC AAATACCGAG GCCAGAGATA ATGGATGAAG ATCAGTTAAT GAAAGAAGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001349616.1 |
CDS | 169..903 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001362687.1 |
1 | ATGCTTGCTC AAATACCGAG GCCAGAGATA ATGGATGAAG ATCAGTTAAT GAAAGAAGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu15192 | |
Clone ID Related Accession (Same CDS sequence) | NM_001362687.1 , NM_026592.4 , NM_026592.3 | |
Accession Version | NM_026592.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 735bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-06-08 | |
Organism | Mus musculus(house mouse) | |
Product | protein C11orf74 homolog isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY777225.1, AK051679.1 and BE946529.1. On Apr 25, 2018 this sequence version replaced NM_026592.3. ##Evidence-Data-START## Transcript exon combination :: AK051679.1, CB233850.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164131, SAMN01164138 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCTTGCTC AAATACCGAG GCCAGAGATA ATGGATGAAG ATCAGTTAAT GAAAGAAGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_080868.1 |
CDS | 171..905 |
Translation |
Target ORF information:
Target ORF information:
|
NM_026592.4 |
1 | ATGCTTGCTC AAATACCGAG GCCAGAGATA ATGGATGAAG ATCAGTTAAT GAAAGAAGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu15192 | |
Clone ID Related Accession (Same CDS sequence) | NM_001362687.1 , NM_026592.4 , NM_026592.3 | |
Accession Version | NM_026592.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 735bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Mus musculus(house mouse) | |
Product | uncharacterized protein C11orf74 homolog | |
Comment | Comment: PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from AK051679.1. On Apr 6, 2007 this sequence version replaced NM_026592.2. ##Evidence-Data-START## Transcript exon combination :: AK051679.1, CB233850.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164131, SAMN01164138 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCTTGCTC AAATACCGAG GCCAGAGATA ATGGATGAAG ATCAGTTAAT GAAAGAAGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_080868.1 |
CDS | 126..860 |
Translation |
Target ORF information:
Target ORF information:
|
NM_026592.3 |
1 | ATGCTTGCTC AAATACCGAG GCCAGAGATA ATGGATGAAG ATCAGTTAAT GAAAGAAGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu30834 | |
Clone ID Related Accession (Same CDS sequence) | XM_006500094.3 | |
Accession Version | XM_006500094.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 444bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | uncharacterized protein C11orf74 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000068.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006500094.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTTGCTC AAATACCGAG GCCAGAGATA ATGGATGAAG ATCAGTTAAT GAAAGAAGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006500157.1 |
CDS | 472..915 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006500094.3 |
1 | ATGCTTGCTC AAATACCGAG GCCAGAGATA ATGGATGAAG ATCAGTTAAT GAAAGAAGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu84317 | |
Clone ID Related Accession (Same CDS sequence) | NM_001362688.1 | |
Accession Version | NM_001362688.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 651bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-24 | |
Organism | Mus musculus(house mouse) | |
Product | protein C11orf74 homolog isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL929569.13. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: CB193700.1 [ECO:0000332] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCTTGCTC AAATACCGAG GCCAGAGATA ATGGATGAAG ATCAGTTAAT GAAAGAAGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001349617.1 |
CDS | 171..821 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001362688.1 |
1 | ATGCTTGCTC AAATACCGAG GCCAGAGATA ATGGATGAAG ATCAGTTAAT GAAAGAAGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Search for the Function of NWC, Third Gene Within RAG Locus: Generation and Characterization of NWC-Deficient Mice. |
Ikaros and RAG-2-mediated antisense transcription are responsible for lymphocyte-specific inactivation of NWC promoter. |
Bidirectional activity of the NWC promoter is responsible for RAG-2 transcription in non-lymphoid cells. |